Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689999
Identifier: 116689999
GI number: 116689999
Start: 2196734
End: 2197012
Strand: Direct
Name: 116689999
Synonym: Bcen2424_1978
Alternate gene names: NA
Gene position: 2196734-2197012 (Clockwise)
Preceding gene: 116689998
Following gene: 116690000
Centisome position: 63.05
GC content: 68.1
Gene sequence:
>279_bases ATGATCGCGCCGACCGAAATCGCACTCGATCACCCGGCACGCGCACTGACGCTGCGCTGGCCCGACGGCGCGACGCAACG TATCGGCTATGCGCAGTTGCGCAGCGATTGTCCGTGTGCGGAATGCCGGAGAATCCGCTTCGATGGCGGCCGTATCGACG CCCGCGCCGGCCTGACGCTCGACGGCGTCGAGGCGCTCGGCTACGGCGTGCGCCTTCTGTTCGGCGACGGCCATGCACGC GGCATTTATCCGTGGCCGTACCTGGCGGGGATCGCATAG
Upstream 100 bases:
>100_bases GGGCGACGCTGCGGGCGCTACACGACGCACTCGACGATCGCGACCCCGAAGTCCGCAAGGCCGTGCGGATCGCGATCGGA CAGATCGACGAGGCGTCGCG
Downstream 100 bases:
>100_bases CGGCGATGGCGCGGCTTCCGCGCTCGCGCGGGTCACATGGCAGAGGCGCGTAAACGCTGCGATACTGACGCCCACGATCG TCGCCACCTACCGTGGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MIAPTEIALDHPARALTLRWPDGATQRIGYAQLRSDCPCAECRRIRFDGGRIDARAGLTLDGVEALGYGVRLLFGDGHAR GIYPWPYLAGIA
Sequences:
>Translated_92_residues MIAPTEIALDHPARALTLRWPDGATQRIGYAQLRSDCPCAECRRIRFDGGRIDARAGLTLDGVEALGYGVRLLFGDGHAR GIYPWPYLAGIA >Mature_92_residues MIAPTEIALDHPARALTLRWPDGATQRIGYAQLRSDCPCAECRRIRFDGGRIDARAGLTLDGVEALGYGVRLLFGDGHAR GIYPWPYLAGIA
Specific function: Unknown
COG id: COG3536
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10025; Mature: 10025
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPTEIALDHPARALTLRWPDGATQRIGYAQLRSDCPCAECRRIRFDGGRIDARAGLTL CCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHCCCCCHHHCEEEECCCCEEECCCCCEE DGVEALGYGVRLLFGDGHARGIYPWPYLAGIA CCHHHCCCEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MIAPTEIALDHPARALTLRWPDGATQRIGYAQLRSDCPCAECRRIRFDGGRIDARAGLTL CCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHCCCCCHHHCEEEECCCCEEECCCCCEE DGVEALGYGVRLLFGDGHARGIYPWPYLAGIA CCHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA