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The map label for this gene is yvoA [H]

Identifier: 116689992

GI number: 116689992

Start: 2189686

End: 2190456

Strand: Direct

Name: yvoA [H]

Synonym: Bcen2424_1971

Alternate gene names: 116689992

Gene position: 2189686-2190456 (Clockwise)

Preceding gene: 116689979

Following gene: 116689993

Centisome position: 62.85

GC content: 66.28

Gene sequence:

>771_bases
ATGACCCCACCCAACGTCGTGCCGCTGTCCGCGGCCCCGCTCTACGTGCAGATCAAGGACACGCTGCGCGCGCGCATTCT
CGACGGCACCTACGCGCCGCACAGCCGGATGCCGTCCGAGCACGAGCTCTGCGCGATGTTCGACGTTAGCCGCATCACGG
TGCGCCAGGCGCTCGGCGACCTGCAGAAGGAAGGCCTGCTGTTCAAGCTGCACGGCAAGGGCACGTTCGTGTCGAAGCCG
AAGGCGTTCCAGAACGTGACGTCGCTGCAGGGTTTTGCCGAGGCGATGTCGTCGATGGGCTACGAGATCGTCAACCAGTT
GCACAGCCTGCGCACCGTGAAGGCCGATCGCCATCTCGCGACGAAGCTGAACGTGCAGGAAGGCGCGCCGCTCGTCGAGA
TCCATCGCGTGCGGCTGCTGAACCGCGAACCCGTGTCGCTCGAACAGACTTGGGTGCCCGAAGCGCTCGGCAAGCGCCTC
GCGGGCGCCGATCTCGCGACCCGCGACATCTTCCTGATCCTCGAGAACGACTGCGGCATCCCGCTCGGCCATGCCGACGT
GTCGATCGACGCGATCCTCGCGGACGACGAAATCGTCGACGCGCTGCACGTCGAGGAAAGCAGCCCCGTGCTGCGCATCG
AGCGCCTCACGCACGACGCGTCGGGCGCGCCGATCGACTACGAATACCTCTACTTCCGCGGCGACGCCTTCCAGTACCGG
TTGCGCGTCGACCGGCAAAAGGCGCGCAAACCTGCAAGGAGCCCGCGATGA

Upstream 100 bases:

>100_bases
CCGCTTTTCCGCAACGGGAAATTCGAAATCACAAATAGTTGGTTGGGGCGCGCAATGACGCTGGCTACACTCGGCCCATC
TTGTCATAACAAGTTGACCG

Downstream 100 bases:

>100_bases
ATACCCATGTGCATGAATACGACGTCGTCGTGGTCGGCGGCGGCACGGCCGGCCCGATGGCGGCCATCAAGGCGAAGGAG
CGCGATCCGTCGCTGCGCGT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTPPNVVPLSAAPLYVQIKDTLRARILDGTYAPHSRMPSEHELCAMFDVSRITVRQALGDLQKEGLLFKLHGKGTFVSKP
KAFQNVTSLQGFAEAMSSMGYEIVNQLHSLRTVKADRHLATKLNVQEGAPLVEIHRVRLLNREPVSLEQTWVPEALGKRL
AGADLATRDIFLILENDCGIPLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYR
LRVDRQKARKPARSPR

Sequences:

>Translated_256_residues
MTPPNVVPLSAAPLYVQIKDTLRARILDGTYAPHSRMPSEHELCAMFDVSRITVRQALGDLQKEGLLFKLHGKGTFVSKP
KAFQNVTSLQGFAEAMSSMGYEIVNQLHSLRTVKADRHLATKLNVQEGAPLVEIHRVRLLNREPVSLEQTWVPEALGKRL
AGADLATRDIFLILENDCGIPLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYR
LRVDRQKARKPARSPR
>Mature_255_residues
TPPNVVPLSAAPLYVQIKDTLRARILDGTYAPHSRMPSEHELCAMFDVSRITVRQALGDLQKEGLLFKLHGKGTFVSKPK
AFQNVTSLQGFAEAMSSMGYEIVNQLHSLRTVKADRHLATKLNVQEGAPLVEIHRVRLLNREPVSLEQTWVPEALGKRLA
GADLATRDIFLILENDCGIPLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYRL
RVDRQKARKPARSPR

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790118, Length=231, Percent_Identity=29.004329004329, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1786950, Length=237, Percent_Identity=26.5822784810127, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI87082252, Length=219, Percent_Identity=26.4840182648402, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788418, Length=228, Percent_Identity=25.4385964912281, Blast_Score=87, Evalue=7e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 28612; Mature: 28481

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPNVVPLSAAPLYVQIKDTLRARILDGTYAPHSRMPSEHELCAMFDVSRITVRQALGD
CCCCCEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
LQKEGLLFKLHGKGTFVSKPKAFQNVTSLQGFAEAMSSMGYEIVNQLHSLRTVKADRHLA
HHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH
TKLNVQEGAPLVEIHRVRLLNREPVSLEQTWVPEALGKRLAGADLATRDIFLILENDCGI
EEECCCCCCCHHEEHHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCC
PLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYR
EECCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCEEEEE
LRVDRQKARKPARSPR
EEECHHHHCCCCCCCC
>Mature Secondary Structure 
TPPNVVPLSAAPLYVQIKDTLRARILDGTYAPHSRMPSEHELCAMFDVSRITVRQALGD
CCCCEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
LQKEGLLFKLHGKGTFVSKPKAFQNVTSLQGFAEAMSSMGYEIVNQLHSLRTVKADRHLA
HHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH
TKLNVQEGAPLVEIHRVRLLNREPVSLEQTWVPEALGKRLAGADLATRDIFLILENDCGI
EEECCCCCCCHHEEHHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCC
PLGHADVSIDAILADDEIVDALHVEESSPVLRIERLTHDASGAPIDYEYLYFRGDAFQYR
EECCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCEEEEE
LRVDRQKARKPARSPR
EEECHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]