Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689968
Identifier: 116689968
GI number: 116689968
Start: 2165244
End: 2165678
Strand: Direct
Name: 116689968
Synonym: Bcen2424_1947
Alternate gene names: NA
Gene position: 2165244-2165678 (Clockwise)
Preceding gene: 116689967
Following gene: 116689970
Centisome position: 62.15
GC content: 71.03
Gene sequence:
>435_bases ATGCGGCGGCTGGCCGCATGCGCGGCGGCGCTCGCGCTGCTCGCCGGTTGCGCGGCAGCGCCCTCGTCCATCTCGGGCGC GCAACCGGCATCCTGCACGCAACCGGGCGAAAGCCGCATGCTGCAGGCCGACCTGCTGTTCGGGCGCGACATCGCCGGGC GCGGCCCCGTCACCGATGCCGAACGCGCGGCATTCCTCGCCGACACGGTCACGCCGCGCTTTCCCGACGGCCTCACCTAC TGGGACACGCACGGCCAGTGGCGCGACCGCTCGACCGGTGGCGTCACGCGCGAAGACAGCTTCGTGATCCGTATCATCGC CGACGATACGCCGGACACGCGCACACGGCTCGCTGCGATCCGGCAAGCGTACGTCCAGCGATTTCACCAGCAATCGGTCG GCATGACCGTCGTGCCGGCCTGCGCGTCGTTCTGA
Upstream 100 bases:
>100_bases TATGTTGACAGCCCTGTTGATAACCCGCCGGACCCGCACGCAAGTGGTTGAGCGCGCAGCGTTTTGCACGCGCGAAGGTC GATCGTCACGAAATGGGCAG
Downstream 100 bases:
>100_bases TTCGACGTCTTCCGCTGCCGGCCGCGGATAAAAAACGGGCGCCCGAAGGCGCCCGTCGCATGGCTGAAGAACAGCGCACC GCCTACTTGCTCTCGAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRRLAACAAALALLAGCAAAPSSISGAQPASCTQPGESRMLQADLLFGRDIAGRGPVTDAERAAFLADTVTPRFPDGLTY WDTHGQWRDRSTGGVTREDSFVIRIIADDTPDTRTRLAAIRQAYVQRFHQQSVGMTVVPACASF
Sequences:
>Translated_144_residues MRRLAACAAALALLAGCAAAPSSISGAQPASCTQPGESRMLQADLLFGRDIAGRGPVTDAERAAFLADTVTPRFPDGLTY WDTHGQWRDRSTGGVTREDSFVIRIIADDTPDTRTRLAAIRQAYVQRFHQQSVGMTVVPACASF >Mature_144_residues MRRLAACAAALALLAGCAAAPSSISGAQPASCTQPGESRMLQADLLFGRDIAGRGPVTDAERAAFLADTVTPRFPDGLTY WDTHGQWRDRSTGGVTREDSFVIRIIADDTPDTRTRLAAIRQAYVQRFHQQSVGMTVVPACASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15413; Mature: 15413
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLAACAAALALLAGCAAAPSSISGAQPASCTQPGESRMLQADLLFGRDIAGRGPVTDA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEHHHHHHCCCCCCCCCCCCH ERAAFLADTVTPRFPDGLTYWDTHGQWRDRSTGGVTREDSFVIRIIADDTPDTRTRLAAI HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH RQAYVQRFHQQSVGMTVVPACASF HHHHHHHHHHHCCCCEEECCCCCC >Mature Secondary Structure MRRLAACAAALALLAGCAAAPSSISGAQPASCTQPGESRMLQADLLFGRDIAGRGPVTDA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEHHHHHHCCCCCCCCCCCCH ERAAFLADTVTPRFPDGLTYWDTHGQWRDRSTGGVTREDSFVIRIIADDTPDTRTRLAAI HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH RQAYVQRFHQQSVGMTVVPACASF HHHHHHHHHHHCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA