Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is ispZ [H]
Identifier: 116689931
GI number: 116689931
Start: 2118768
End: 2119298
Strand: Direct
Name: ispZ [H]
Synonym: Bcen2424_1910
Alternate gene names: 116689931
Gene position: 2118768-2119298 (Clockwise)
Preceding gene: 116689930
Following gene: 116689932
Centisome position: 60.82
GC content: 59.13
Gene sequence:
>531_bases ATGAAATTCCTGTTCGATCTGTTTCCGATCATCCTGTTTTTTGTCGCCTTCAAGGTCTGGGGCATCTTCACCGCCACCGC CGTCGCGATCGTCGCGACGCTGGCCCAGGTCGCCTGGGTCGCCTTCCGGCACCGGAAGGTCGACACGATGCTGTGGGTCA GCCTCGGCGTGATCGTCGTGTTCGGTGGCGCCACCCTCGTCCTGCATGACGAGAAATTCATTCAATGGAAACCGACTGTG TTGTACTGGCTGTTTGCGATCGGGCTGCTCGCCGCACGCTATGCGTTCGGCAAGAACCTGATCGAGAAGATGATGGGCAA GCAGCTCACGCTGCCCGTGCCCGTGTGGGACAAGCTGAACGTCGCCTGGGCGCTGTTCTTCGCGGTGCTCGGCGTCGCGA ACCTGTACGTGGTGCACAACTTCACCGAATCGCAATGGGTGAACTTCAAGCTGTTCGGTACGACGGGCGCGATGGTCGTG TTCATCATCCTGCAGAGCCTGTGGCTCACGAAGTACCTGAAGGACGAATGA
Upstream 100 bases:
>100_bases GCCCGGGGCGGCCCGCCCCCGATCCGCGACGGCGATGCCTGGCGGGTCCCTACAACGGTGACGGGCCGCGCCAGCGGCCC GTCACGCAGCTGCGAGCGCC
Downstream 100 bases:
>100_bases CATGAGCGACGCCTTTCTCCACGCCTCCGCCGACGAACGCATCGCGCTGATCGAAGCGCGCCTCACCGCGTCGCTCGCGC CGCTGTCGCTCACCGTGCGC
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVVFGGATLVLHDEKFIQWKPTV LYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLNVAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVV FIILQSLWLTKYLKDE
Sequences:
>Translated_176_residues MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVVFGGATLVLHDEKFIQWKPTV LYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLNVAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVV FIILQSLWLTKYLKDE >Mature_176_residues MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVVFGGATLVLHDEKFIQWKPTV LYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLNVAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVV FIILQSLWLTKYLKDE
Specific function: Involved in cell division; probably involved in intracellular septation [H]
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family [H]
Homologues:
Organism=Escherichia coli, GI1787507, Length=176, Percent_Identity=43.1818181818182, Blast_Score=156, Evalue=7e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006008 [H]
Pfam domain/function: PF04279 IspA [H]
EC number: NA
Molecular weight: Translated: 20112; Mature: 20112
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGATLVLHDEKFIQWKPTVLYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLN CCCEEEEEECCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVVFIILQSLWLTKYLKDE HHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGATLVLHDEKFIQWKPTVLYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLN CCCEEEEEECCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVVFIILQSLWLTKYLKDE HHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA