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The map label for this gene is msrB [H]

Identifier: 116689930

GI number: 116689930

Start: 2118206

End: 2118637

Strand: Direct

Name: msrB [H]

Synonym: Bcen2424_1909

Alternate gene names: 116689930

Gene position: 2118206-2118637 (Clockwise)

Preceding gene: 116689929

Following gene: 116689931

Centisome position: 60.8

GC content: 63.19

Gene sequence:

>432_bases
ATGTCCCACGATTCCGACGACAAGACCTTCCCGTACCAGAAGGACGACGCCGAACTGCGCCGCCGGCTCACGCCGATGCA
GTACGAGGTCACGCAGCACGCGGCGACCGAGCGCGCGTTCACCGGCGAATACACCGACACCGAGGACGCCGGCATCTACA
AGTGCGTCGTCTGCAGCACGCCGCTGTTCGAATCCGGCGCCAAGTTCCACTCCGGCTGCGGGTGGCCCAGCTACTTCAAG
CCGCTCAACGGCGAGGTGATTGACGAGAAGGTCGACTACTCGCACGGGATGGTGCGCGTCGAAGTGCGCTGCAACAATTG
CGGCGCGCATCTGGGCCACGTGTTCGAGGACGGCCCGCGCGACAAGACCGGTTTGCGGTACTGCATCAATTCGGCTGCGT
TAAACTTCGAGTCCCGACCCGAAAACGAATGA

Upstream 100 bases:

>100_bases
ACGCGGCGTTGCCGCCCGACTGGGCCGGCTCGCTCGAAGTGAGCTGCTCGTCCTGAGCCCGCAACCCGCGCATCTCGACC
GACCGATCAGGAGAACCCCC

Downstream 100 bases:

>100_bases
GCGGCGCCGGGCGGATCGCCGAGGCAGCCAGCCCGGGGCGGCCCGCCCCCGATCCGCGACGGCGATGCCTGGCGGGTCCC
TACAACGGTGACGGGCCGCG

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSHDSDDKTFPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFK
PLNGEVIDEKVDYSHGMVRVEVRCNNCGAHLGHVFEDGPRDKTGLRYCINSAALNFESRPENE

Sequences:

>Translated_143_residues
MSHDSDDKTFPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFK
PLNGEVIDEKVDYSHGMVRVEVRCNNCGAHLGHVFEDGPRDKTGLRYCINSAALNFESRPENE
>Mature_142_residues
SHDSDDKTFPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKP
LNGEVIDEKVDYSHGMVRVEVRCNNCGAHLGHVFEDGPRDKTGLRYCINSAALNFESRPENE

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI37620216, Length=119, Percent_Identity=64.7058823529412, Blast_Score=162, Evalue=1e-40,
Organism=Homo sapiens, GI301336164, Length=119, Percent_Identity=64.7058823529412, Blast_Score=162, Evalue=1e-40,
Organism=Homo sapiens, GI301336162, Length=119, Percent_Identity=64.7058823529412, Blast_Score=162, Evalue=1e-40,
Organism=Homo sapiens, GI73089054, Length=119, Percent_Identity=64.7058823529412, Blast_Score=162, Evalue=1e-40,
Organism=Homo sapiens, GI117606353, Length=130, Percent_Identity=45.3846153846154, Blast_Score=114, Evalue=4e-26,
Organism=Escherichia coli, GI1788077, Length=119, Percent_Identity=52.9411764705882, Blast_Score=139, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17553450, Length=130, Percent_Identity=44.6153846153846, Blast_Score=116, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI115532676, Length=130, Percent_Identity=44.6153846153846, Blast_Score=116, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6319816, Length=130, Percent_Identity=40.7692307692308, Blast_Score=103, Evalue=7e-24,
Organism=Drosophila melanogaster, GI221378664, Length=132, Percent_Identity=50, Blast_Score=133, Evalue=3e-32,
Organism=Drosophila melanogaster, GI221378662, Length=139, Percent_Identity=48.2014388489209, Blast_Score=132, Evalue=9e-32,
Organism=Drosophila melanogaster, GI24645799, Length=132, Percent_Identity=49.2424242424242, Blast_Score=130, Evalue=3e-31,
Organism=Drosophila melanogaster, GI45553335, Length=132, Percent_Identity=49.2424242424242, Blast_Score=130, Evalue=3e-31,
Organism=Drosophila melanogaster, GI21356369, Length=132, Percent_Identity=49.2424242424242, Blast_Score=130, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24645801, Length=143, Percent_Identity=45.4545454545455, Blast_Score=125, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24645804, Length=143, Percent_Identity=45.4545454545455, Blast_Score=125, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 16193; Mature: 16062

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDSDDKTFPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCST
CCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC
PLFESGAKFHSGCGWPSYFKPLNGEVIDEKVDYSHGMVRVEVRCNNCGAHLGHVFEDGPR
CCHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCC
DKTGLRYCINSAALNFESRPENE
CCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SHDSDDKTFPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCST
CCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC
PLFESGAKFHSGCGWPSYFKPLNGEVIDEKVDYSHGMVRVEVRCNNCGAHLGHVFEDGPR
CCHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCC
DKTGLRYCINSAALNFESRPENE
CCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA