The gene/protein map for NC_008542 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689923

Identifier: 116689923

GI number: 116689923

Start: 2106684

End: 2108825

Strand: Direct

Name: 116689923

Synonym: Bcen2424_1902

Alternate gene names: NA

Gene position: 2106684-2108825 (Clockwise)

Preceding gene: 116689917

Following gene: 116689929

Centisome position: 60.47

GC content: 69.28

Gene sequence:

>2142_bases
ATGCATCGCCTTGCGAAGTCGCTGTGTCTCGGGCTCGTCTGCGCCGGCCTGCTGTCGGCCTGCAACGACGACGACGTCAA
GTCCACCACCCCGCCATCGAACACCGCCGCGTTGTCGTTCCGCATGGACACCGGCGGCCAGATCAACGCGTTCTACCGGC
AGGACAAGGTCGCCGCGCACCTGCTGGTGCGCTCGTCGACGAAGCCGCGCCTGCTGGTGGTGTTCCCCGCCGGCAACAGC
GGCACCGGGCTGTGGTTCGACGACACCGCGCAGCCGGTGAACTGGACCCTCGACACGCCGCCGTCGGCGCTGTCGGCGCC
GGACACGCACGGCCGCCCGCTGTACGGCATCGGCGCCGACGTGTCGGTCGACACCGGTACGCTGACGATCCGGCAGGGCG
TGCTCAGCAACGTGCGCTTCCTGCGCGACTTCAACGGCGGCGCGACGATCCCGCAGCAGATCCTCACCGCGCCGACGGTC
CAGGGCAGCACCGCACAATGGCAACGCGACCGGCTCGACGGCGCGCCCGGCTATGCGCTGCGCATCACGCTGCGCGACGG
CGGCAGCATCGCGCCGGCAGCGGGCGGCAAGCTCGTGCTCAACGCACCCGCGGGTTCGCACACGCTGAAGCTGCACATCG
ATGCGCTATCGGGCGAGACGCCGCTGTCGCCGATCACGCACGCCGACCTGTTCGCACCGTCGGTAAATCCCGACCCGGTC
AGCCAGAACGTGCTCGAATTCCTGAGCTTCAACGACAAGCTGCTGGCCGGCTCGTGGCAGTACGACACGTACTTCGGCCG
CGACACGCTGATCTCGGTCCGCATGCTGATGCCCGTGCTCGAACCCGCGGCGATCGAGGCCGGCCTGTCGTCGGTGCTGA
GCCGCCTGTCGGCCGACGGCAAGGTCGCGCACGAGGAAGGCATCGGCGAATTCGCGCTGGTCGACAACCAGAAGAACGGG
CGGCCGAACGATGCGACACCGACCTACGACTACAAGATGATCGACAGCGACTACCTGCTCGCACCGATCGCGGCCGCGTG
GCTGATCGACGATGCGCGCGGCCAGGCCCGCGCCGCCGCGTATCTGGCGCAGCGCGGCAGCGACGGGCAGACCAACGGCA
GCCGCCTCGTCGTCAATCTGCTGCACGTCGCGACGACCGCGCAACCGTTCGCGCAGCAGCCGTCGGTCGCGAACCTGATC
CACCTGCGGCCCGGCGAAATCGTCGGCAACTGGCGCGACAGCACCGACGGTCTCGGCGGCGGCGTGTACCCGTACGACGT
GAACGCGGTGCTCGTGCCGGCCGCGCTGCGCGCGGCGAACGCGTTCCTCGCCCGCGGCCTGCTCGATCCGTACCTCGATG
CCCAGCAACGCGCGACGCTCGCCAACACGGCGAACCAGGCGGTCACGTGGGAAACGCAGGCGCCGCCGCTGTTCCAGGTC
AGCGTGCCGGCCGCGCAGGCGGCCACCGACGTGTCGGCCTATGCGCCGTCCGCTGGCGTGCCGGCCGGCGCCGCGCCCAA
CGCACCGCTGGCCTTCTACGCGCTGTCGCTCGACCAGCAGGGCAACCCGATTCCGGTGATGAATTCGGACGGCGGTTTCG
CGCTGCTGTTCGGTACGCCGCCGGACGATCAGCTCCAGCGGATCGTCAGTGACGTCACGCGGCCGTTCCCGACCGGGCTC
GTGACGGATGTCGGGATGCTGATCGCGAACCCCGCGTATGCGAGCTCGTCGCTGTGGCCGAAGTTCACGAGCTCCGCGTA
TCACGGCACGGTGATCTGGTCGTGGCAGCAGGCGATGTGGGTGGCCGGGCTCGATCGCCAGCTGGCGCGCCAGGACCTGT
CGGCTACGACACGCACGCTGCTCACGCAGGCGCGGCAGACGATCTGGCAGGTGATCTCGAACGGGCGCGACATGCGCACG
TCGGAAATGTGGACGTGGTCCTACGTGAACGGCAAGTACCAGACCGACGCATTCGGCACGCGCAGTGCGGATGCGACCGA
AGCCAACGCGGCGCAGCTCTGGAGTACGACGTATCTCGCGATCCGCGATCCGCAGCAGCGTGCGGGCAAGTACTGGTGGC
AGGCGTCGCAGTCGATGCAGGACGACCAGTCGAAGCAGGCGACGGCGGTAGCGTCGCGCTAG

Upstream 100 bases:

>100_bases
TATTCGGCAGAGTGAATACAAAGCGAGACCAAACGGACAAAAGATCCGCCGCTTAGAACATCCAGATAAAAAATCGCCAG
TCATCAGGAGGGACATCAAC

Downstream 100 bases:

>100_bases
CGCGTCGCCGCGCGTGAGCAGGCCGACACCGACACCGGCCCGCAAAAGCCCGGCGGCACTCCCGCCGCCGGGGCTTTCGG
TGCAGATCCGGTTAGCGCGA

Product: putative lipoprotein

Products: NA

Alternate protein names: Type V Secretory Pathway Adhesin AidA; Glycogen Debranching

Number of amino acids: Translated: 713; Mature: 713

Protein sequence:

>713_residues
MHRLAKSLCLGLVCAGLLSACNDDDVKSTTPPSNTAALSFRMDTGGQINAFYRQDKVAAHLLVRSSTKPRLLVVFPAGNS
GTGLWFDDTAQPVNWTLDTPPSALSAPDTHGRPLYGIGADVSVDTGTLTIRQGVLSNVRFLRDFNGGATIPQQILTAPTV
QGSTAQWQRDRLDGAPGYALRITLRDGGSIAPAAGGKLVLNAPAGSHTLKLHIDALSGETPLSPITHADLFAPSVNPDPV
SQNVLEFLSFNDKLLAGSWQYDTYFGRDTLISVRMLMPVLEPAAIEAGLSSVLSRLSADGKVAHEEGIGEFALVDNQKNG
RPNDATPTYDYKMIDSDYLLAPIAAAWLIDDARGQARAAAYLAQRGSDGQTNGSRLVVNLLHVATTAQPFAQQPSVANLI
HLRPGEIVGNWRDSTDGLGGGVYPYDVNAVLVPAALRAANAFLARGLLDPYLDAQQRATLANTANQAVTWETQAPPLFQV
SVPAAQAATDVSAYAPSAGVPAGAAPNAPLAFYALSLDQQGNPIPVMNSDGGFALLFGTPPDDQLQRIVSDVTRPFPTGL
VTDVGMLIANPAYASSSLWPKFTSSAYHGTVIWSWQQAMWVAGLDRQLARQDLSATTRTLLTQARQTIWQVISNGRDMRT
SEMWTWSYVNGKYQTDAFGTRSADATEANAAQLWSTTYLAIRDPQQRAGKYWWQASQSMQDDQSKQATAVASR

Sequences:

>Translated_713_residues
MHRLAKSLCLGLVCAGLLSACNDDDVKSTTPPSNTAALSFRMDTGGQINAFYRQDKVAAHLLVRSSTKPRLLVVFPAGNS
GTGLWFDDTAQPVNWTLDTPPSALSAPDTHGRPLYGIGADVSVDTGTLTIRQGVLSNVRFLRDFNGGATIPQQILTAPTV
QGSTAQWQRDRLDGAPGYALRITLRDGGSIAPAAGGKLVLNAPAGSHTLKLHIDALSGETPLSPITHADLFAPSVNPDPV
SQNVLEFLSFNDKLLAGSWQYDTYFGRDTLISVRMLMPVLEPAAIEAGLSSVLSRLSADGKVAHEEGIGEFALVDNQKNG
RPNDATPTYDYKMIDSDYLLAPIAAAWLIDDARGQARAAAYLAQRGSDGQTNGSRLVVNLLHVATTAQPFAQQPSVANLI
HLRPGEIVGNWRDSTDGLGGGVYPYDVNAVLVPAALRAANAFLARGLLDPYLDAQQRATLANTANQAVTWETQAPPLFQV
SVPAAQAATDVSAYAPSAGVPAGAAPNAPLAFYALSLDQQGNPIPVMNSDGGFALLFGTPPDDQLQRIVSDVTRPFPTGL
VTDVGMLIANPAYASSSLWPKFTSSAYHGTVIWSWQQAMWVAGLDRQLARQDLSATTRTLLTQARQTIWQVISNGRDMRT
SEMWTWSYVNGKYQTDAFGTRSADATEANAAQLWSTTYLAIRDPQQRAGKYWWQASQSMQDDQSKQATAVASR
>Mature_713_residues
MHRLAKSLCLGLVCAGLLSACNDDDVKSTTPPSNTAALSFRMDTGGQINAFYRQDKVAAHLLVRSSTKPRLLVVFPAGNS
GTGLWFDDTAQPVNWTLDTPPSALSAPDTHGRPLYGIGADVSVDTGTLTIRQGVLSNVRFLRDFNGGATIPQQILTAPTV
QGSTAQWQRDRLDGAPGYALRITLRDGGSIAPAAGGKLVLNAPAGSHTLKLHIDALSGETPLSPITHADLFAPSVNPDPV
SQNVLEFLSFNDKLLAGSWQYDTYFGRDTLISVRMLMPVLEPAAIEAGLSSVLSRLSADGKVAHEEGIGEFALVDNQKNG
RPNDATPTYDYKMIDSDYLLAPIAAAWLIDDARGQARAAAYLAQRGSDGQTNGSRLVVNLLHVATTAQPFAQQPSVANLI
HLRPGEIVGNWRDSTDGLGGGVYPYDVNAVLVPAALRAANAFLARGLLDPYLDAQQRATLANTANQAVTWETQAPPLFQV
SVPAAQAATDVSAYAPSAGVPAGAAPNAPLAFYALSLDQQGNPIPVMNSDGGFALLFGTPPDDQLQRIVSDVTRPFPTGL
VTDVGMLIANPAYASSSLWPKFTSSAYHGTVIWSWQQAMWVAGLDRQLARQDLSATTRTLLTQARQTIWQVISNGRDMRT
SEMWTWSYVNGKYQTDAFGTRSADATEANAAQLWSTTYLAIRDPQQRAGKYWWQASQSMQDDQSKQATAVASR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76319; Mature: 76319

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLAKSLCLGLVCAGLLSACNDDDVKSTTPPSNTAALSFRMDTGGQINAFYRQDKVAAH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHH
LLVRSSTKPRLLVVFPAGNSGTGLWFDDTAQPVNWTLDTPPSALSAPDTHGRPLYGIGAD
HHEECCCCCEEEEEEECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCC
VSVDTGTLTIRQGVLSNVRFLRDFNGGATIPQQILTAPTVQGSTAQWQRDRLDGAPGYAL
CEECCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCEEE
RITLRDGGSIAPAAGGKLVLNAPAGSHTLKLHIDALSGETPLSPITHADLFAPSVNPDPV
EEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCC
SQNVLEFLSFNDKLLAGSWQYDTYFGRDTLISVRMLMPVLEPAAIEAGLSSVLSRLSADG
HHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC
KVAHEEGIGEFALVDNQKNGRPNDATPTYDYKMIDSDYLLAPIAAAWLIDDARGQARAAA
CCHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEECCCCHHHHHH
YLAQRGSDGQTNGSRLVVNLLHVATTAQPFAQQPSVANLIHLRPGEIVGNWRDSTDGLGG
HHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHEEEEECCCCEEECCCCCCCCCCC
GVYPYDVNAVLVPAALRAANAFLARGLLDPYLDAQQRATLANTANQAVTWETQAPPLFQV
CCCEEECCEEEEHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHCCCCEEEEECCCCCEEEE
SVPAAQAATDVSAYAPSAGVPAGAAPNAPLAFYALSLDQQGNPIPVMNSDGGFALLFGTP
ECCCHHHHCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCEEEEECCC
PDDQLQRIVSDVTRPFPTGLVTDVGMLIANPAYASSSLWPKFTSSAYHGTVIWSWQQAMW
CHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHH
VAGLDRQLARQDLSATTRTLLTQARQTIWQVISNGRDMRTSEMWTWSYVNGKYQTDAFGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEECCCCCC
RSADATEANAAQLWSTTYLAIRDPQQRAGKYWWQASQSMQDDQSKQATAVASR
CCCCCCCCCHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHRLAKSLCLGLVCAGLLSACNDDDVKSTTPPSNTAALSFRMDTGGQINAFYRQDKVAAH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHH
LLVRSSTKPRLLVVFPAGNSGTGLWFDDTAQPVNWTLDTPPSALSAPDTHGRPLYGIGAD
HHEECCCCCEEEEEEECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCC
VSVDTGTLTIRQGVLSNVRFLRDFNGGATIPQQILTAPTVQGSTAQWQRDRLDGAPGYAL
CEECCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCEEE
RITLRDGGSIAPAAGGKLVLNAPAGSHTLKLHIDALSGETPLSPITHADLFAPSVNPDPV
EEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCC
SQNVLEFLSFNDKLLAGSWQYDTYFGRDTLISVRMLMPVLEPAAIEAGLSSVLSRLSADG
HHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC
KVAHEEGIGEFALVDNQKNGRPNDATPTYDYKMIDSDYLLAPIAAAWLIDDARGQARAAA
CCHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEECCCCHHHHHH
YLAQRGSDGQTNGSRLVVNLLHVATTAQPFAQQPSVANLIHLRPGEIVGNWRDSTDGLGG
HHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHEEEEECCCCEEECCCCCCCCCCC
GVYPYDVNAVLVPAALRAANAFLARGLLDPYLDAQQRATLANTANQAVTWETQAPPLFQV
CCCEEECCEEEEHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHCCCCEEEEECCCCCEEEE
SVPAAQAATDVSAYAPSAGVPAGAAPNAPLAFYALSLDQQGNPIPVMNSDGGFALLFGTP
ECCCHHHHCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCEEEEECCC
PDDQLQRIVSDVTRPFPTGLVTDVGMLIANPAYASSSLWPKFTSSAYHGTVIWSWQQAMW
CHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHH
VAGLDRQLARQDLSATTRTLLTQARQTIWQVISNGRDMRTSEMWTWSYVNGKYQTDAFGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEECCCCCC
RSADATEANAAQLWSTTYLAIRDPQQRAGKYWWQASQSMQDDQSKQATAVASR
CCCCCCCCCHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA