Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
---|---|
Accession | NC_008542 |
Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116689905
Identifier: 116689905
GI number: 116689905
Start: 2089473
End: 2089922
Strand: Direct
Name: 116689905
Synonym: Bcen2424_1884
Alternate gene names: NA
Gene position: 2089473-2089922 (Clockwise)
Preceding gene: 116689904
Following gene: 116689906
Centisome position: 59.98
GC content: 70.0
Gene sequence:
>450_bases ATGGCATGGAGACAACACCGCTGGTTCCGCCGCTGGCTGATCGTGATCGTGTTCTGGGCGGTGCCCGTCGCGATCATCGC CGTGCGCGAGATCCGCGAGGAAATGGCCTACAACAAGGCGGACCTGCAACTCGCGCTGACCACCTGGCAGCTCACCGACG CGCAACAGGCCGCCGGCGCCGCCGCGAAGTGCCACGGGAATCCTGACGAAGCGCGCGCGACCGGCTGCCCGGCCGACGTG CTCGCCGCCAACGCGCCGCGCCAGCAGGCGGCCCGCGACGAATACGTGGTGCGCCGCAATACGCTCGCCGGCTATCTGTG GCATGCGTTCGTCGGCTACTGGGTCGTTCCGGCCGCGTTCCTGTTCGCATGCGGCGTCGTGATCGCGCTGATCCGCCGCG CGCTGCGCCGCCCGCCGATCAAGCCGCCCGTTCCCCCCGTCACACACTGA
Upstream 100 bases:
>100_bases TTTTCTTCTATGATGGCTGCAACGCGGCCCACCCAAGACCAAGAAGCGCCATCGGGCCGCCCTCGAGACGGACGCGCACG CGCGTCAAACGGAGGCTTGG
Downstream 100 bases:
>100_bases CACCGGCGCACGCCGCAGGCGCCGCCGCCCGCTGCTCGAGCGCCGCGTTCCCCGCACGCCGGCCACGCGCCACGCGCGCC TGGCGCGTGCGCGACATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAWRQHRWFRRWLIVIVFWAVPVAIIAVREIREEMAYNKADLQLALTTWQLTDAQQAAGAAAKCHGNPDEARATGCPADV LAANAPRQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAFLFACGVVIALIRRALRRPPIKPPVPPVTH
Sequences:
>Translated_149_residues MAWRQHRWFRRWLIVIVFWAVPVAIIAVREIREEMAYNKADLQLALTTWQLTDAQQAAGAAAKCHGNPDEARATGCPADV LAANAPRQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAFLFACGVVIALIRRALRRPPIKPPVPPVTH >Mature_148_residues AWRQHRWFRRWLIVIVFWAVPVAIIAVREIREEMAYNKADLQLALTTWQLTDAQQAAGAAAKCHGNPDEARATGCPADVL AANAPRQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAFLFACGVVIALIRRALRRPPIKPPVPPVTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16777; Mature: 16646
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWRQHRWFRRWLIVIVFWAVPVAIIAVREIREEMAYNKADLQLALTTWQLTDAQQAAGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEHHHHHCCHHHHHCC AAKCHGNPDEARATGCPADVLAANAPRQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAF HHHCCCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFACGVVIALIRRALRRPPIKPPVPPVTH HHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AWRQHRWFRRWLIVIVFWAVPVAIIAVREIREEMAYNKADLQLALTTWQLTDAQQAAGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEHHHHHCCHHHHHCC AAKCHGNPDEARATGCPADVLAANAPRQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAF HHHCCCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFACGVVIALIRRALRRPPIKPPVPPVTH HHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA