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The map label for this gene is ydhO [H]

Identifier: 116689887

GI number: 116689887

Start: 2072514

End: 2073605

Strand: Direct

Name: ydhO [H]

Synonym: Bcen2424_1866

Alternate gene names: 116689887

Gene position: 2072514-2073605 (Clockwise)

Preceding gene: 116689886

Following gene: 116689888

Centisome position: 59.49

GC content: 69.32

Gene sequence:

>1092_bases
ATGCTTCGAATCTGGGTTCCCGTCGCCGTCGTCTCCCTGCTTGCGGCCTGTTCCAGCGTGCCGCCGCAGTCGGCATCGCG
TTCCGCTTCGGGGATGAAGATCACGACGCCGCGCGCATTCCCCGCGCCCGCCAATTTCCCGAAATTCGTCGACCACAGCG
TCGGCCAGGAAGAAATCTCGATCCAGGCGATGAGCCTCGTCGGCGTCCCGTATCGCTGGGGCGGCAACACGCCGACGAGC
GGCTTCGACTGCAGCGGGCTCGTGCGCTACGTGATCGGCCGCGCGGCCGACGTGAACCTGCCGCGCACGACTGCCGACAT
GAGCGGCCGCGGCGTATCGGTCGAACCCGACGAGATCGCGCCGGGCGACCTGATTTTCTTCAATACGACCGGACGGCCGC
ATTCGCACGTCGGCATCTATGTCGGCAAGCTGCGCTTCGTCAACGCGCCGTCGACGGGCGGCACCGTACGGCTCGACTAC
CTGACGAACCCGTACTGGGCCAAGCGATTCGACGGCATTCGCCGCGTCGCGCCGCCGCGCTCGGCCCCGACGCCGTTCGA
TGCGCCGACTTACGAGGCCAAGCGTGACGAGCCGCGTAATCCGCCGGTGGTCGCGGCCGCTCCGGTGGTCGTGACGGCTG
CCGTCGCACAGCGGCAGCCCGCGTATGCGTCGTCGCAAGCAAGAGCAACGCAGACACAGGCACCGGCCATCCCGAGCACG
CCGGTCGTGACGGCCGCCGCAGCTGCACCGGCAGCACCGGCCGCCGATCCGTATGAACCGCCGCCACCGAGGATGCAGGC
GGCCCAGCAGCAAGCCACGTCGGTGAATGACGGCGCAACCGCGATGGCGGCCAATGCAGGACCGGCCGCGTCGGCGGAGG
TCGGCACGCAGATTCCGACGACCGCGCTGACGGCCGCCCAGGCTGCCGCCTTCGATGCAGAGCCGCCGCCCGCCACCGCG
TCGACGCCGGCACGCAGTATCGAGCCCGCGCCCGTGCAGGTATTGCGTGCGTCGACGCAATCTGCACCCGTCAGCCCGCG
CACGAGTACGGCGGACGATCCGATAGCACGGTTTGCGACCGGCAGTTACTGA

Upstream 100 bases:

>100_bases
AATTCTCAAGAATGGTTGCCTAAGCCCCGCTGGAGCGTCTACCATCGGGCCTATCTGTTGTCATACGATTCGCGAGCGCG
CCGCGCTCGCCCGCCTTGCC

Downstream 100 bases:

>100_bases
TCGATTGTTGCTTGCCGGGCGACGGTGACGTCGACGGTATCCGCTGCCGCTTCGCCGCAACCTTCCGCCCCGTTACTATC
TTCCTGTCCCAATAATGGGG

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLRIWVPVAVVSLLAACSSVPPQSASRSASGMKITTPRAFPAPANFPKFVDHSVGQEEISIQAMSLVGVPYRWGGNTPTS
GFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSVEPDEIAPGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDY
LTNPYWAKRFDGIRRVAPPRSAPTPFDAPTYEAKRDEPRNPPVVAAAPVVVTAAVAQRQPAYASSQARATQTQAPAIPST
PVVTAAAAAPAAPAADPYEPPPPRMQAAQQQATSVNDGATAMAANAGPAASAEVGTQIPTTALTAAQAAAFDAEPPPATA
STPARSIEPAPVQVLRASTQSAPVSPRTSTADDPIARFATGSY

Sequences:

>Translated_363_residues
MLRIWVPVAVVSLLAACSSVPPQSASRSASGMKITTPRAFPAPANFPKFVDHSVGQEEISIQAMSLVGVPYRWGGNTPTS
GFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSVEPDEIAPGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDY
LTNPYWAKRFDGIRRVAPPRSAPTPFDAPTYEAKRDEPRNPPVVAAAPVVVTAAVAQRQPAYASSQARATQTQAPAIPST
PVVTAAAAAPAAPAADPYEPPPPRMQAAQQQATSVNDGATAMAANAGPAASAEVGTQIPTTALTAAQAAAFDAEPPPATA
STPARSIEPAPVQVLRASTQSAPVSPRTSTADDPIARFATGSY
>Mature_363_residues
MLRIWVPVAVVSLLAACSSVPPQSASRSASGMKITTPRAFPAPANFPKFVDHSVGQEEISIQAMSLVGVPYRWGGNTPTS
GFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSVEPDEIAPGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDY
LTNPYWAKRFDGIRRVAPPRSAPTPFDAPTYEAKRDEPRNPPVVAAAPVVVTAAVAQRQPAYASSQARATQTQAPAIPST
PVVTAAAAAPAAPAADPYEPPPPRMQAAQQQATSVNDGATAMAANAGPAASAEVGTQIPTTALTAAQAAAFDAEPPPATA
STPARSIEPAPVQVLRASTQSAPVSPRTSTADDPIARFATGSY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=123, Percent_Identity=41.4634146341463, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786421, Length=147, Percent_Identity=36.734693877551, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1788501, Length=177, Percent_Identity=33.8983050847458, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788001, Length=119, Percent_Identity=40.3361344537815, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 37540; Mature: 37540

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIWVPVAVVSLLAACSSVPPQSASRSASGMKITTPRAFPAPANFPKFVDHSVGQEEIS
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHE
IQAMSLVGVPYRWGGNTPTSGFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSVEPDEIA
EEEEEEECCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYLTNPYWAKRFDGIRRVAPPR
CCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHCHHHCCCCC
SAPTPFDAPTYEAKRDEPRNPPVVAAAPVVVTAAVAQRQPAYASSQARATQTQAPAIPST
CCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC
PVVTAAAAAPAAPAADPYEPPPPRMQAAQQQATSVNDGATAMAANAGPAASAEVGTQIPT
CCEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHCCCCCCH
TALTAAQAAAFDAEPPPATASTPARSIEPAPVQVLRASTQSAPVSPRTSTADDPIARFAT
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHC
GSY
CCC
>Mature Secondary Structure
MLRIWVPVAVVSLLAACSSVPPQSASRSASGMKITTPRAFPAPANFPKFVDHSVGQEEIS
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHE
IQAMSLVGVPYRWGGNTPTSGFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSVEPDEIA
EEEEEEECCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYLTNPYWAKRFDGIRRVAPPR
CCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHCHHHCCCCC
SAPTPFDAPTYEAKRDEPRNPPVVAAAPVVVTAAVAQRQPAYASSQARATQTQAPAIPST
CCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC
PVVTAAAAAPAAPAADPYEPPPPRMQAAQQQATSVNDGATAMAANAGPAASAEVGTQIPT
CCEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHCCCCCCH
TALTAAQAAAFDAEPPPATASTPARSIEPAPVQVLRASTQSAPVSPRTSTADDPIARFAT
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHC
GSY
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]