Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is ylaK [H]
Identifier: 116689886
GI number: 116689886
Start: 2070475
End: 2072277
Strand: Direct
Name: ylaK [H]
Synonym: Bcen2424_1865
Alternate gene names: 116689886
Gene position: 2070475-2072277 (Clockwise)
Preceding gene: 116689885
Following gene: 116689887
Centisome position: 59.43
GC content: 67.22
Gene sequence:
>1803_bases ATGCCTTTGCCTACTCCCCCCAGCAAGCTCGGCAGCCTGCTGCCGCCCGACGAATACAAGGCGAAAGCGCGGCCCGCGAA AGCCGCGAAGAAATCCGCCGAAGGGGACGCATCCACAGCCGGTGACTATGGTCCGGCCAGCGTGGCCCAACCGATGATCG AAGCCGCGAACACGGCCGCGCCGCTGCGTGCCGTCGCGTCTTCGGCGCCCGATGCCGCGAGCGCGCCCGCGCGAGGCCGC AAGACCCGACAGACGGCCGCGCTGTTGCAGCCGCTGCAGGCGCCTGCGGCCCCCGCGGCACCGGTCGTTGCACGCAACGA CAAGCCGGCCACCGGGAAACCGGCCGCCGCGCCCGCGCGCGATGCCGGCGCCGCGACGAAGTCGCGCAGCCGCAAGCCCG CCGAAGTCGAACAGCAGAAACTGTTCGTGCTCGACACCAACGTGCTGATGCACGACCCGAGCAGCCTCTTCCGCTTCGAG GAACACGACGTCTATCTGCCGATGATGACGCTCGAGGAACTCGACAACCACAAGAAGGGGATGTCCGAAGTCGCGCGTAA CGCCCGTCAGGTCAGCCGCACGCTCGACGCGCTGGTCGCCGACGGCGGCCCGATCTCGGACGGCATCCCGCTGTCGCGCC TCGGCAGCCGCGAGGCGGTCGGCCGCCTGTACTTCCAGACGAAGCTCGCCGACATCGCGCCGGTCGAAGGCTTGCCCGCA GGCAAGGCCGACAACCAGATCCTCGGCGTCGTGCGCGCGCTGCAGCGCGACCGGCCCGACCGCCAGGTCGTGCTGGTGTC GAAAGACATCAACATGCGGATCAAGGCGCACGCGCTCGGCCTGCCCGCGGAAGACTACTTCAACGACCAGGTCCTCGAGG ATTCGGATCTCCTGTACAACGGCGTGCGCGAACTGCCGCAGGACTTCTGGACCAAGCATGCGAAGGGCATGGAGAGCTGG CAGGACACGAAGACGGGCACCACGTACTACCGCGTGACCGGCCCGCTCGTCGCGTCGATGCTCGTCAACGAGTTCGTCTA TCTCGAGCCGCAGAACGGCGAGCCGACGTTCCACGCGATCGTCCGCGAGCTGAACGGCAAGACGGCGCTGCTGCAGACGC TGCGCGACTACAGCCACCACAAGAACAACGTGTGGGGCATCACCGCGCGCAACCGCGAGCAGAACTTCGCGCTGAACCTG CTGATGAACCCCGAGATCGACTTCGTCACGCTGCTCGGTCAGGCCGGCACCGGCAAGACGCTCGTCGCGCTCGCGGCCGG CCTCGCGCAGGTGCTCGACGACAAGCGCTACAACGAGATCATCGTGACGCGCGCGACCGTGCCCGTCGGCGAGGACATCG GTTTCCTGCCCGGCACCGAGGAAGAGAAGATGCAGCCGTGGATGGGTGCATTCGACGACAACCTCGAAGTGCTGCAGAAG ACCGACGACGCGGCCGGCGAATGGGGCCGTGCCGCGACGCAGGAGTTGATCCGCTCGCGCCTGAAGGTGAAGAGCATGAA CTTCATGCGCGGCCGCACGTTCGTCGACAAGTATCTGATCATCGACGAGGCGCAGAACCTGACGCCGAAGCAGATGAAGA CGCTCGTCACGCGCGCGGGCCCCGGCACGAAGATCGTGTGCCTCGGCAACATCGCGCAGATCGACACGCCTTACCTGACC GAAGGCAGCTCGGGCCTGACCTACGTCGTCGACCGCTTCAAGGGCTGGGGCCACAGCGGCCACGTGACCCTCGCACGCGG CGAACGCTCGCGGCTCGCCGACTACGCGTCGGACATTCTGTAA
Upstream 100 bases:
>100_bases AATTCCTGTGCGCCACCGCGCGCAAACTGCATGCGTCTACGTCACGCAGGATGCGATCAGCGGCGCACGCCATGCGACAC GATTCCTCCCGAGGGACACC
Downstream 100 bases:
>100_bases CGCGCACGCCGGCCGACCGGCCGGCTTTCGACGCCACACGGCGCTCCGTTTCCGGAGCGCCGTTTTTATTTGGGGTCGAA AACGAAGGTAATGCCCCGTC
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MPLPTPPSKLGSLLPPDEYKAKARPAKAAKKSAEGDASTAGDYGPASVAQPMIEAANTAAPLRAVASSAPDAASAPARGR KTRQTAALLQPLQAPAAPAAPVVARNDKPATGKPAAAPARDAGAATKSRSRKPAEVEQQKLFVLDTNVLMHDPSSLFRFE EHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDALVADGGPISDGIPLSRLGSREAVGRLYFQTKLADIAPVEGLPA GKADNQILGVVRALQRDRPDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDSDLLYNGVRELPQDFWTKHAKGMESW QDTKTGTTYYRVTGPLVASMLVNEFVYLEPQNGEPTFHAIVRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFALNL LMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQK TDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLT EGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL
Sequences:
>Translated_600_residues MPLPTPPSKLGSLLPPDEYKAKARPAKAAKKSAEGDASTAGDYGPASVAQPMIEAANTAAPLRAVASSAPDAASAPARGR KTRQTAALLQPLQAPAAPAAPVVARNDKPATGKPAAAPARDAGAATKSRSRKPAEVEQQKLFVLDTNVLMHDPSSLFRFE EHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDALVADGGPISDGIPLSRLGSREAVGRLYFQTKLADIAPVEGLPA GKADNQILGVVRALQRDRPDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDSDLLYNGVRELPQDFWTKHAKGMESW QDTKTGTTYYRVTGPLVASMLVNEFVYLEPQNGEPTFHAIVRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFALNL LMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQK TDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLT EGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL >Mature_599_residues PLPTPPSKLGSLLPPDEYKAKARPAKAAKKSAEGDASTAGDYGPASVAQPMIEAANTAAPLRAVASSAPDAASAPARGRK TRQTAALLQPLQAPAAPAAPVVARNDKPATGKPAAAPARDAGAATKSRSRKPAEVEQQKLFVLDTNVLMHDPSSLFRFEE HDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDALVADGGPISDGIPLSRLGSREAVGRLYFQTKLADIAPVEGLPAG KADNQILGVVRALQRDRPDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDSDLLYNGVRELPQDFWTKHAKGMESWQ DTKTGTTYYRVTGPLVASMLVNEFVYLEPQNGEPTFHAIVRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFALNLL MNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQKT DDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTE GSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=191, Percent_Identity=36.1256544502618, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI145693103, Length=167, Percent_Identity=37.125748502994, Blast_Score=90, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 65316; Mature: 65185
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPTPPSKLGSLLPPDEYKAKARPAKAAKKSAEGDASTAGDYGPASVAQPMIEAANTAA CCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHH PLRAVASSAPDAASAPARGRKTRQTAALLQPLQAPAAPAAPVVARNDKPATGKPAAAPAR HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCC DAGAATKSRSRKPAEVEQQKLFVLDTNVLMHDPSSLFRFEEHDVYLPMMTLEELDNHKKG CCCCCHHHCCCCCCCHHHCEEEEEECCEEEECCHHHHEECCCCEEEHHHHHHHHHHHHHH MSEVARNARQVSRTLDALVADGGPISDGIPLSRLGSREAVGRLYFQTKLADIAPVEGLPA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC GKADNQILGVVRALQRDRPDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDSDLLYN CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCCHHHHHH GVRELPQDFWTKHAKGMESWQDTKTGTTYYRVTGPLVASMLVNEFVYLEPQNGEPTFHAI HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHEEEEECCCCCHHHHHH VRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQAGTGKT HHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCHH LVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQK HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCHHCCCCCCHHHHHH TDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHHHHHCCC PGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL CCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCC >Mature Secondary Structure PLPTPPSKLGSLLPPDEYKAKARPAKAAKKSAEGDASTAGDYGPASVAQPMIEAANTAA CCCCCHHHHCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHH PLRAVASSAPDAASAPARGRKTRQTAALLQPLQAPAAPAAPVVARNDKPATGKPAAAPAR HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCC DAGAATKSRSRKPAEVEQQKLFVLDTNVLMHDPSSLFRFEEHDVYLPMMTLEELDNHKKG CCCCCHHHCCCCCCCHHHCEEEEEECCEEEECCHHHHEECCCCEEEHHHHHHHHHHHHHH MSEVARNARQVSRTLDALVADGGPISDGIPLSRLGSREAVGRLYFQTKLADIAPVEGLPA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC GKADNQILGVVRALQRDRPDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDSDLLYN CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCCHHHHHH GVRELPQDFWTKHAKGMESWQDTKTGTTYYRVTGPLVASMLVNEFVYLEPQNGEPTFHAI HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHEEEEECCCCCHHHHHH VRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQAGTGKT HHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCHH LVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQK HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCHHCCCCCCHHHHHH TDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHHHHHCCC PGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL CCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]