Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is bcp [H]
Identifier: 116689885
GI number: 116689885
Start: 2069681
End: 2070142
Strand: Direct
Name: bcp [H]
Synonym: Bcen2424_1864
Alternate gene names: 116689885
Gene position: 2069681-2070142 (Clockwise)
Preceding gene: 116689884
Following gene: 116689886
Centisome position: 59.41
GC content: 59.74
Gene sequence:
>462_bases GTGTCTGTCGAAGTTGACCGTCAAGTTCCCGATTTCACCGCACCGGCCACGGGCGGCGACGTTTCGCTGTCCGACCTGAA GGGCAAGAAGCTCGTGCTGTACTTCTATCCGAAGGACAACACGCCGGGCTGCACGACCGAAGGGCTGCAGTTCCGCGATC TCTATCCGAAGTTCAAGAAGGCCGGTGCGGAAGTCATCGGCGTGTCGCGCGACAGCCTGCGCTCGCACGACAATTTCAAG GCCAAGCTCGAACTGCCGTTCCCGCTGATTTCCGATGCCGACGAAGCACTGTGCGCGCTGTTCGATGTCATCAAGATGAA GAAAATGTATGGCAAGGAAGTGCGCGGAATCGAGCGCTCGACGTTCCTGCTCGACGCCGACGGCGTGCTTCGCCAGGCAT GGCGCGGCATCAAGGTACCGGGTCACGTGGACGACGTGCTAAAGGCTGTACAAGCGCTTTGA
Upstream 100 bases:
>100_bases CGAGCCGGCGTCGCCGCTCCGCCCTTGCGGCGCGCTGCCGCGACGCCCCGCCGAACCGCGCCGCCGCGGCGGCGCCCTTC CATAACAACAGGAGAAACAC
Downstream 100 bases:
>100_bases GGCGCGTTATATTGGGCCGCAATGAATGCCAGTTCGCCCCATATTTCTCGTAGCTGCGCCCGTGCCCGTTGCAATGCTTC CCGGCACCTGACGCGCACGA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSVEVDRQVPDFTAPATGGDVSLSDLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEVIGVSRDSLRSHDNFK AKLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERSTFLLDADGVLRQAWRGIKVPGHVDDVLKAVQAL
Sequences:
>Translated_153_residues MSVEVDRQVPDFTAPATGGDVSLSDLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEVIGVSRDSLRSHDNFK AKLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERSTFLLDADGVLRQAWRGIKVPGHVDDVLKAVQAL >Mature_152_residues SVEVDRQVPDFTAPATGGDVSLSDLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEVIGVSRDSLRSHDNFKA KLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERSTFLLDADGVLRQAWRGIKVPGHVDDVLKAVQAL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI32189392, Length=164, Percent_Identity=35.9756097560976, Blast_Score=73, Evalue=8e-14, Organism=Homo sapiens, GI4505591, Length=165, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI32455266, Length=165, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI32455264, Length=165, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=4e-13, Organism=Escherichia coli, GI1788825, Length=143, Percent_Identity=39.1608391608392, Blast_Score=106, Evalue=7e-25, Organism=Caenorhabditis elegans, GI193204376, Length=143, Percent_Identity=34.965034965035, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI32565831, Length=142, Percent_Identity=34.5070422535211, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322180, Length=151, Percent_Identity=32.4503311258278, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319407, Length=163, Percent_Identity=26.9938650306748, Blast_Score=61, Evalue=6e-11, Organism=Drosophila melanogaster, GI17738015, Length=164, Percent_Identity=36.5853658536585, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24656348, Length=144, Percent_Identity=36.1111111111111, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI17864676, Length=144, Percent_Identity=36.1111111111111, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16947; Mature: 16816
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEVDRQVPDFTAPATGGDVSLSDLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKK CCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH AGAEVIGVSRDSLRSHDNFKAKLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERS CCCEEEECCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC TFLLDADGVLRQAWRGIKVPGHVDDVLKAVQAL EEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SVEVDRQVPDFTAPATGGDVSLSDLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKK CCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH AGAEVIGVSRDSLRSHDNFKAKLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERS CCCEEEECCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC TFLLDADGVLRQAWRGIKVPGHVDDVLKAVQAL EEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]