Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689879
Identifier: 116689879
GI number: 116689879
Start: 2063968
End: 2064339
Strand: Direct
Name: 116689879
Synonym: Bcen2424_1858
Alternate gene names: NA
Gene position: 2063968-2064339 (Clockwise)
Preceding gene: 116689878
Following gene: 116689880
Centisome position: 59.24
GC content: 62.63
Gene sequence:
>372_bases ATGAACCCCGTTTCGTTCGTCTGCATCGTCACCGGCGTGATGCTCAACGCCTGTGCGCAACTTCTGCTGAAAGCCGGCGT CAACGCCGTTGGACACTTCGAATTCAGCCGTGCGAACATCCTCCCGGTCGGCCTGAAGATCGCGACCCAGCTGCCGATCA TCGGCGGCCTCGGCTGCTATGTACTGAGCGTCGTGGTGTGGATCGTCGGGTTGTCGCGGGTCGACGTGTCGATCGCGTAT CCGATGCTGTCGCTCGGCTACGTCGTCAACGCGTTCGCGGCGTGGTACCTGTTCGGCGAGGTGCTGTCGGTCCAGAAGCT CGTCGGCATCGGCATCATCCTGATCGGTGTGCTCGTGCTGGCGCGCAGCTGA
Upstream 100 bases:
>100_bases TACGACGCGCTGGTCAAGGAAGGCGTGCCGATGCGCGTGATCGCGCGCGACAACCGCCGCGTGATCGTCGAGAAACCGCA ATCGTAAGGACGTCCCCCGC
Downstream 100 bases:
>100_bases GCGCGGCCCGCGCCGTTAAGCGTCCGCCTACAAAAAATCACGGTACGAATCCGCCAACCGGTGTTTAATGCCGGTTTCGG GCGGATCGCCCGACCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Small Multidrug Resistance Transmembrane Protein; QuateRNAry Ammonium Compound-Resistance Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNPVSFVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANILPVGLKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSIAY PMLSLGYVVNAFAAWYLFGEVLSVQKLVGIGIILIGVLVLARS
Sequences:
>Translated_123_residues MNPVSFVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANILPVGLKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSIAY PMLSLGYVVNAFAAWYLFGEVLSVQKLVGIGIILIGVLVLARS >Mature_123_residues MNPVSFVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANILPVGLKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSIAY PMLSLGYVVNAFAAWYLFGEVLSVQKLVGIGIILIGVLVLARS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12975; Mature: 12975
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVSFVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANILPVGLKIATQLPIIGGLGCY CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCEEEHHHHHHHHCCCCCCHHHH VLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSVQKLVGIGIILIGVLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARS HCC >Mature Secondary Structure MNPVSFVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANILPVGLKIATQLPIIGGLGCY CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCEEEHHHHHHHHCCCCCCHHHH VLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSVQKLVGIGIILIGVLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA