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The map label for this gene is rodZ [H]

Identifier: 116689834

GI number: 116689834

Start: 2015069

End: 2016085

Strand: Reverse

Name: rodZ [H]

Synonym: Bcen2424_1813

Alternate gene names: 116689834

Gene position: 2016085-2015069 (Counterclockwise)

Preceding gene: 116689835

Following gene: 116689833

Centisome position: 57.87

GC content: 70.11

Gene sequence:

>1017_bases
ATGAGTGAGCCGCAGCCGTCTAACGGCGCAGAGACGAATGCCGCGAAGCCGGCACCGGCCGGACTGGAATCGCTGGCGGC
GGTCGGCAGCCGGCTGGCGCAGCTTCGGGAGACGAAGGGCTGGTCGGTCGACGATGTGTCGGCGCGACTCAAGGTCGCAC
CGCAGAAGCTCCGCGCGCTCGAGTCTGGCGACATCAGCCATTTGCCCGGTGTGACGTTCGCGCTCGGTGTCGTGCGCAGC
TACGCGAAGATGCTCGGCGTCGATCCGGAACCGTTCGCGCAGGCGCTGCGCCGCGAGCGCGGGGTGCCGGAAGTCGACCT
GTCGATGCCGGCGTCGTCGGGCACGGATCTGCCGCGCGGCCGCGTGTCGATTCCGCTGGGCGGCTCGTCGCGCCACCATC
CTTGGCTGTGGGGAACGGGGATCGTCATCGTCGCGGTGGTTGCCGTACTGATGTGGCACACTGGCGGCGATTCGTCGAGC
CTGCTCGCACGCTTCAAGGGCGGCGAGGCCGAGCATGCGTCGGCCGCGAGTGCGACGGCGGCATCGTCGTCGGCTGAAGA
GGCGGCTACGAACGGCGCGTCGGCAGCGGTTGCGAATGAGGTTCCGGCCCCGGCTGCTGCATCGGTTGCCCCGGCGCAGG
CGATCGCGTCGGCGGTTCCGGCGCCTGCGGCCCCGGTCGCGACGGCGGCTGCGTCGCAGCCCGTGGCGGCAACGGCGGCG
GCCAGCGCGGCCGCACCGGCCCAGCCGGCGAGCGTCGTGGTGGCGGCAGGCCAGTCGATGGTCGAACTGAAGGTCAAGCA
GGATTGCTGGTTCAGCGTGCGCGACAAGAACGGCAAGGAGCTGTTCTCGGCGCTGGTGCGCGCCGGCGAAACGAAGCAGG
TGGCCGGTGACGGGCCGTTCAAGGTCACGATCGGCAACAAGGCCGGCCTCGACGCGGTTGCGTTCGACGGAAAACCGGTC
GATCCGGCAAAATATTCGGCAGCGCGGGGTAACGTGGCGCGGTTCACGTTGCCCTGA

Upstream 100 bases:

>100_bases
GCGGCGCCTCGGCGCCGCGCATGGTATGAACCGTTGCGGGTGCCGGCCGGCAGGAGCCGGCGGCAGCCGCCAGTGAAGAA
GAATCGACGCGAGGACAAGG

Downstream 100 bases:

>100_bases
CGTCAAGCGCCGTGGCGAAGGCCTGTCGTCGATCTCGGCAGGCCGTGAGGGCACGGCGCTTTTTCAATTCATGCGCCACG
TTGCGGCGCATTCCGCGTAA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSEPQPSNGAETNAAKPAPAGLESLAAVGSRLAQLRETKGWSVDDVSARLKVAPQKLRALESGDISHLPGVTFALGVVRS
YAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRGRVSIPLGGSSRHHPWLWGTGIVIVAVVAVLMWHTGGDSSS
LLARFKGGEAEHASAASATAASSSAEEAATNGASAAVANEVPAPAAASVAPAQAIASAVPAPAAPVATAAASQPVAATAA
ASAAAPAQPASVVVAAGQSMVELKVKQDCWFSVRDKNGKELFSALVRAGETKQVAGDGPFKVTIGNKAGLDAVAFDGKPV
DPAKYSAARGNVARFTLP

Sequences:

>Translated_338_residues
MSEPQPSNGAETNAAKPAPAGLESLAAVGSRLAQLRETKGWSVDDVSARLKVAPQKLRALESGDISHLPGVTFALGVVRS
YAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRGRVSIPLGGSSRHHPWLWGTGIVIVAVVAVLMWHTGGDSSS
LLARFKGGEAEHASAASATAASSSAEEAATNGASAAVANEVPAPAAASVAPAQAIASAVPAPAAPVATAAASQPVAATAA
ASAAAPAQPASVVVAAGQSMVELKVKQDCWFSVRDKNGKELFSALVRAGETKQVAGDGPFKVTIGNKAGLDAVAFDGKPV
DPAKYSAARGNVARFTLP
>Mature_337_residues
SEPQPSNGAETNAAKPAPAGLESLAAVGSRLAQLRETKGWSVDDVSARLKVAPQKLRALESGDISHLPGVTFALGVVRSY
AKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRGRVSIPLGGSSRHHPWLWGTGIVIVAVVAVLMWHTGGDSSSL
LARFKGGEAEHASAASATAASSSAEEAATNGASAAVANEVPAPAAASVAPAQAIASAVPAPAAPVATAAASQPVAATAAA
SAAAPAQPASVVVAAGQSMVELKVKQDCWFSVRDKNGKELFSALVRAGETKQVAGDGPFKVTIGNKAGLDAVAFDGKPVD
PAKYSAARGNVARFTLP

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=337, Percent_Identity=27.5964391691395, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 34028; Mature: 33896

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPQPSNGAETNAAKPAPAGLESLAAVGSRLAQLRETKGWSVDDVSARLKVAPQKLRAL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH
ESGDISHLPGVTFALGVVRSYAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRG
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
RVSIPLGGSSRHHPWLWGTGIVIVAVVAVLMWHTGGDSSSLLARFKGGEAEHASAASATA
EEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHH
ASSSAEEAATNGASAAVANEVPAPAAASVAPAQAIASAVPAPAAPVATAAASQPVAATAA
HCCCHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHH
ASAAAPAQPASVVVAAGQSMVELKVKQDCWFSVRDKNGKELFSALVRAGETKQVAGDGPF
HHCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCEECCCCCE
KVTIGNKAGLDAVAFDGKPVDPAKYSAARGNVARFTLP
EEEECCCCCCCEEEECCCCCCCHHHHHCCCCEEEEECC
>Mature Secondary Structure 
SEPQPSNGAETNAAKPAPAGLESLAAVGSRLAQLRETKGWSVDDVSARLKVAPQKLRAL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH
ESGDISHLPGVTFALGVVRSYAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRG
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
RVSIPLGGSSRHHPWLWGTGIVIVAVVAVLMWHTGGDSSSLLARFKGGEAEHASAASATA
EEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHH
ASSSAEEAATNGASAAVANEVPAPAAASVAPAQAIASAVPAPAAPVATAAASQPVAATAA
HCCCHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHH
ASAAAPAQPASVVVAAGQSMVELKVKQDCWFSVRDKNGKELFSALVRAGETKQVAGDGPF
HHCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCEECCCCCE
KVTIGNKAGLDAVAFDGKPVDPAKYSAARGNVARFTLP
EEEECCCCCCCEEEECCCCCCCHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA