Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is engA [H]
Identifier: 116689829
GI number: 116689829
Start: 2008831
End: 2010168
Strand: Reverse
Name: engA [H]
Synonym: Bcen2424_1808
Alternate gene names: 116689829
Gene position: 2010168-2008831 (Counterclockwise)
Preceding gene: 116689830
Following gene: 116689828
Centisome position: 57.7
GC content: 65.4
Gene sequence:
>1338_bases ATGAAACCGGTCATTGCCCTCGTTGGGCGCCCCAATGTGGGGAAATCCACGCTGTTCAACCGGCTCACGCGCTCGCGCGA TGCGCTGGTCGCCGACTTGCCCGGCCTGACGCGCGATCGCCATTACGGCGAAGGGCGCGTCGGCGAACGGCCTTACCTGG TCGTCGATACGGGCGGCTTCGAACCCGTCGCGAAGGACGGCATCCTGCACGAAATGGCGCGCCAGACGCGGCAGGCCGTC GAGGAAGCCGACGTCGTCGTGTTCATCGTCGACGGCCGTAACGGGCTCGCGCCGCAGGACAAGTCGATCGCCGACTACCT GCGCAAGACCGGCCGGCCGATCTTCCTGGTCGTCAACAAGGCCGAAGGGATGAAGTACACGGCGGTCGCGACGGACTTCT ACGAGCTCGGGCTCGGCGATCCGCGCGCGATCTCGGCCGCGCACGGCGACGGCGTGACCGACATGATCAACGAGGCGCTC GAAGTCGCGTACGCGGGCCAGCCCGAGGAGGCGGACGAGGACGATCCGTCGCGCGGCATCAAGATCGCGATCGTCGGCCG GCCGAACGTCGGCAAGTCGACGCTCGTCAACGCGCTGATCGGCGAAGACCGCGTGATCGCGTTCGACATGCCGGGTACGA CGCGCGATTCGATCTACGTCGACTTCGAACGTAACGGCAAGAAATACACGCTGATCGACACGGCCGGCCTGCGCCGCCGC GGCAAGGTGTTCGAGGCGATCGAGAAGTTCTCGGTCGTGAAGACGCTGCAGTCGATCTCCGACGCGAACGTCGTCATTCT TCTGCTGGATGCGCAGCAGGACATTTCCGACCAGGACGCACACATCGCCGGCTTCGTCGTCGAGCAGGGCCGCGCGCTCG TGATCGGCGTCAACAAATGGGACGGTCTCGACGACCACGCGCGCGACCGCGCGAAAGCGGATTTGACCCGCAAGCTGAAA TTCCTCGACTTCGCGAAATCGCACTTCATTTCGGCCGCGAAGAAGACGGGCATCGGCGCGCTGATGCGCTCGGTCGACGA CGCGTACGCGGCCGCGATGGCGAAGCTGCCGACGCCGAAGCTCACGCGCGCGCTGATCGAGGCCGTCGAGTTCCAGCAGC CGCGCCGTCGCGGCCCGGTGCGTCCGAAGCTGCGCTATGCGCACCAGGGCGGCCAGAATCCGCCGATCATCGTGATCCAC GGCAACGCGCTCGACGCGGTGACGGAAACGTACAAGCGTTACCTCGAAAACCGATTCCGCGAAACTTTCTCGCTGACCGG GACTCCATTGCGCATAGAGTTCCGTTCGTCGAACAACCCGTACGCGGACAAGGGCTGA
Upstream 100 bases:
>100_bases GCGCGCATCCGGCGCGGCGCGAATTCGTGATATTTTCATTCAGCGCAGCCGCCCGCAGCAGCGGGCCTCCCGCTGCTGCG CTTCACCGTAGAAAACACAG
Downstream 100 bases:
>100_bases AGCACGCCCCGCAAGGCATCGGCCCCATGGCCAGTGGCCGGGCGGGGCAGGCAAAATCAGCTATAGTGTAGCGATTGGCG CCGGATCTCTTTTTCTTCGT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDGILHEMARQTRQAV EEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL EVAYAGQPEEADEDDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR GKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARDRAKADLTRKLK FLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIH GNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRSSNNPYADKG
Sequences:
>Translated_445_residues MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDGILHEMARQTRQAV EEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL EVAYAGQPEEADEDDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR GKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARDRAKADLTRKLK FLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIH GNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRSSNNPYADKG >Mature_445_residues MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDGILHEMARQTRQAV EEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL EVAYAGQPEEADEDDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR GKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARDRAKADLTRKLK FLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIH GNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRSSNNPYADKG
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=468, Percent_Identity=51.7094017094017, Blast_Score=476, Evalue=1e-135, Organism=Escherichia coli, GI2367268, Length=92, Percent_Identity=39.1304347826087, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788919, Length=124, Percent_Identity=33.0645161290323, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17507259, Length=95, Percent_Identity=37.8947368421053, Blast_Score=69, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=180, Percent_Identity=31.6666666666667, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 48982; Mature: 48982
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF CCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK CCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEEC AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAYAGQPEEADEDDPSRGI CCCCEEEEEEHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCE KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR EEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCHH GKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKW HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEECCCC DGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKLPTPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFR HHHHHHHHHHHCCHHHCCCCCCHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH ETFSLTGTPLRIEFRSSNNPYADKG HHHCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF CCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK CCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEEC AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAYAGQPEEADEDDPSRGI CCCCEEEEEEHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCE KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR EEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCHH GKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKW HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEECCCC DGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKLPTPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFR HHHHHHHHHHHCCHHHCCCCCCHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH ETFSLTGTPLRIEFRSSNNPYADKG HHHCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA