Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is hflK [H]
Identifier: 116689826
GI number: 116689826
Start: 2005769
End: 2007157
Strand: Reverse
Name: hflK [H]
Synonym: Bcen2424_1805
Alternate gene names: 116689826
Gene position: 2007157-2005769 (Counterclockwise)
Preceding gene: 116689827
Following gene: 116689825
Centisome position: 57.61
GC content: 69.4
Gene sequence:
>1389_bases GTGAACGAATACAACGAGCGGAGTACCTGGCGGCGGATGCGCGCCTTGCTGTCGATCAACGATCCCCGCTGGGGACGCGG CGAAGGCAATGGCAAGGACGGGTCCCGCCCGCGCGCGAACGAATCGAAGCGTCCGCAAGGCGGCGACGGCGATGGTCCGC CCGATCTCGACGAGATGTGGCGCAACTTCAACCGGCGCCTGAGCGGCCTGTTCGGCGGCAAGGGCGGCAACGGCTTCCGT CCCGACAACGGCCGGGCCGCACGGGTCGGCGTCGGCATCGTGATCGGCGTACTGGTCGCGGTGTATGCGGGCAGCGGGCT GTTCGTCGTGCAGGAAGGCCAGACGGGCGTCGTGCTGCAGCTCGGCAAGCTGTCGGGCACGGTCGGCCAGGGCGTGCATT GGCGCGCGCCGTATCCGTTCGCGTCGCACGAGATCGTCGACACGTCGCAGGTGCGCTCGATCGAGATCGGCCGCAACAAC GTCGTGCGCCTTGCAAACGTGAAGGAAGCCGCGATGCTGACGCGCGATGCCGACATCGTCGACGTGCGCTTCATCGTCCA GTACCGGATTCGTTCCGCCACCGATTACCTGTTCCGCAGCGTCGATCCCGAACGCAGCGTGTCGCAGGCCGCGCAGGCCG CGGTGCGCGCGATCGTCGGCACGCGTAGCGCGGCCGACATGCTGAACCAGGATCGCGATGCGCTGCGCGAGCAGCTTTCC ACCGCGATCCAGCGCGACCTCGACCGCTACCAGTCGGGGCTCGAGGTGACGGCCGTCACGATGCAGAGCGTCGCGGCGCC CGAGCAGACCCAGGCCGCGTACGCCGAAGTCGCGAAGGCGCGGGACGAGCGCGAGGCCGCGAAGCGCGCCGCGCAGGCGT ATGCAAGCGACCTGCTGCCGAAGGCGCAGGGCGATGCGGCGAAGCTCATCGACGAAGCGAAGGCGTATGCCGATCGCGTG GTCACCGAAGCCGAAGGCGACGCGGACCGCTTCAAGCAGGTCTACGCGCAGTATTCGAAGGCGCCGGCGGTCATCCGCGA GCGGATGTACCTCGAGACGATGCAGGAAATCTATTCGAACGCGACGAAGGTGTTCGTCGGCAACAAGGGCGGCAACAGCG TCGTGTATCTGCCGCTCGACAAGCTCGTCGAGCAGGGGCGGCAAAACGCCGCGGCGTCGACCGGCGCATCCGCGCCCGAT GCGGCGTCGGCACCGGCCGCAACGGCGCCCTCGGCAGCCGCTGCCGCGTCGGCACCGGCCGCAACGGCGCCCTCGGCAGC CGCTGCCGCGCCGGCGAGCGCCGCACCGGCCGCCACCGCGTCGGGTGTCGACGTGCTGCGATCGCGGGACGCGTTTCGCA GCCGGTCGCGTGAAGACGATACGAAGTAA
Upstream 100 bases:
>100_bases GCACGTCCGCTGAACCACACGAAGACCACACGATTTCCGAACACGGGCGCTAACCGGTCCCGGCCGGTTCGCCGGCGTCC AATCTGGTGAACAAACTCTG
Downstream 100 bases:
>100_bases CGGGGAGCGCAGAACATGAACCGAATCATTGCGCTCGTCGTCGCAATCGTGATCGTTGCCTTCGCGGCATCGTCGACGGT CCTGACCGTCGATCCGCGCC
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MNEYNERSTWRRMRALLSINDPRWGRGEGNGKDGSRPRANESKRPQGGDGDGPPDLDEMWRNFNRRLSGLFGGKGGNGFR PDNGRAARVGVGIVIGVLVAVYAGSGLFVVQEGQTGVVLQLGKLSGTVGQGVHWRAPYPFASHEIVDTSQVRSIEIGRNN VVRLANVKEAAMLTRDADIVDVRFIVQYRIRSATDYLFRSVDPERSVSQAAQAAVRAIVGTRSAADMLNQDRDALREQLS TAIQRDLDRYQSGLEVTAVTMQSVAAPEQTQAAYAEVAKARDEREAAKRAAQAYASDLLPKAQGDAAKLIDEAKAYADRV VTEAEGDADRFKQVYAQYSKAPAVIRERMYLETMQEIYSNATKVFVGNKGGNSVVYLPLDKLVEQGRQNAAASTGASAPD AASAPAATAPSAAAAASAPAATAPSAAAAAPASAAPAATASGVDVLRSRDAFRSRSREDDTK
Sequences:
>Translated_462_residues MNEYNERSTWRRMRALLSINDPRWGRGEGNGKDGSRPRANESKRPQGGDGDGPPDLDEMWRNFNRRLSGLFGGKGGNGFR PDNGRAARVGVGIVIGVLVAVYAGSGLFVVQEGQTGVVLQLGKLSGTVGQGVHWRAPYPFASHEIVDTSQVRSIEIGRNN VVRLANVKEAAMLTRDADIVDVRFIVQYRIRSATDYLFRSVDPERSVSQAAQAAVRAIVGTRSAADMLNQDRDALREQLS TAIQRDLDRYQSGLEVTAVTMQSVAAPEQTQAAYAEVAKARDEREAAKRAAQAYASDLLPKAQGDAAKLIDEAKAYADRV VTEAEGDADRFKQVYAQYSKAPAVIRERMYLETMQEIYSNATKVFVGNKGGNSVVYLPLDKLVEQGRQNAAASTGASAPD AASAPAATAPSAAAAASAPAATAPSAAAAAPASAAPAATASGVDVLRSRDAFRSRSREDDTK >Mature_462_residues MNEYNERSTWRRMRALLSINDPRWGRGEGNGKDGSRPRANESKRPQGGDGDGPPDLDEMWRNFNRRLSGLFGGKGGNGFR PDNGRAARVGVGIVIGVLVAVYAGSGLFVVQEGQTGVVLQLGKLSGTVGQGVHWRAPYPFASHEIVDTSQVRSIEIGRNN VVRLANVKEAAMLTRDADIVDVRFIVQYRIRSATDYLFRSVDPERSVSQAAQAAVRAIVGTRSAADMLNQDRDALREQLS TAIQRDLDRYQSGLEVTAVTMQSVAAPEQTQAAYAEVAKARDEREAAKRAAQAYASDLLPKAQGDAAKLIDEAKAYADRV VTEAEGDADRFKQVYAQYSKAPAVIRERMYLETMQEIYSNATKVFVGNKGGNSVVYLPLDKLVEQGRQNAAASTGASAPD AASAPAATAPSAAAAASAPAATAPSAAAAAPASAAPAATASGVDVLRSRDAFRSRSREDDTK
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=386, Percent_Identity=32.1243523316062, Blast_Score=179, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 49303; Mature: 49303
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEYNERSTWRRMRALLSINDPRWGRGEGNGKDGSRPRANESKRPQGGDGDGPPDLDEMW CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RNFNRRLSGLFGGKGGNGFRPDNGRAARVGVGIVIGVLVAVYAGSGLFVVQEGQTGVVLQ HHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEE LGKLSGTVGQGVHWRAPYPFASHEIVDTSQVRSIEIGRNNVVRLANVKEAAMLTRDADIV ECCCCCCCCCCEECCCCCCCCCCCCCCCHHHEEEEECCCCEEEECCHHHHHHHHCCCCHH DVRFIVQYRIRSATDYLFRSVDPERSVSQAAQAAVRAIVGTRSAADMLNQDRDALREQLS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHH TAIQRDLDRYQSGLEVTAVTMQSVAAPEQTQAAYAEVAKARDEREAAKRAAQAYASDLLP HHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAQGDAAKLIDEAKAYADRVVTEAEGDADRFKQVYAQYSKAPAVIRERMYLETMQEIYSN CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC ATKVFVGNKGGNSVVYLPLDKLVEQGRQNAAASTGASAPDAASAPAATAPSAAAAASAPA CEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC ATAPSAAAAAPASAAPAATASGVDVLRSRDAFRSRSREDDTK CCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNEYNERSTWRRMRALLSINDPRWGRGEGNGKDGSRPRANESKRPQGGDGDGPPDLDEMW CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RNFNRRLSGLFGGKGGNGFRPDNGRAARVGVGIVIGVLVAVYAGSGLFVVQEGQTGVVLQ HHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEE LGKLSGTVGQGVHWRAPYPFASHEIVDTSQVRSIEIGRNNVVRLANVKEAAMLTRDADIV ECCCCCCCCCCEECCCCCCCCCCCCCCCHHHEEEEECCCCEEEECCHHHHHHHHCCCCHH DVRFIVQYRIRSATDYLFRSVDPERSVSQAAQAAVRAIVGTRSAADMLNQDRDALREQLS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHH TAIQRDLDRYQSGLEVTAVTMQSVAAPEQTQAAYAEVAKARDEREAAKRAAQAYASDLLP HHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAQGDAAKLIDEAKAYADRVVTEAEGDADRFKQVYAQYSKAPAVIRERMYLETMQEIYSN CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC ATKVFVGNKGGNSVVYLPLDKLVEQGRQNAAASTGASAPDAASAPAATAPSAAAAASAPA CEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC ATAPSAAAAAPASAAPAATASGVDVLRSRDAFRSRSREDDTK CCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]