Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689818
Identifier: 116689818
GI number: 116689818
Start: 1995779
End: 1996531
Strand: Reverse
Name: 116689818
Synonym: Bcen2424_1797
Alternate gene names: NA
Gene position: 1996531-1995779 (Counterclockwise)
Preceding gene: 116689820
Following gene: 116689817
Centisome position: 57.31
GC content: 67.2
Gene sequence:
>753_bases ATGTCCCGCAGCTTTCCTACGACGTTGCCAACTTCCCGCATTTCTCTCGTCGCGCTCGGCGCAGCGCTCGCCGCGGCTTT GTCTGCCGGGCCTTCCGGTGCATTTGCGCAGGCCACTGGCGCCAGCGCGCCGGACACCGGCGCGTCCGCACCCGCTGCAG CCTCCGCCGCCCCGGATTTCGACGCCCGTCAAAAAGTGCTCAATCAACGCTCCGCGGAAAACGATTATCGTTATGCGGTG GCGGAGCACGATTGTTACAGCAAGTTCTTCGTCAACCACTGTCTCGGCAAGGCACGCGACCAGATGCGCGAGGAGCGGGC GAGCATTCGCCAGGAACAGCTCGCGCTGAACGACGAGCAGCGCGCGGTGCGGGCGCAGCAGCGCGACCAGCAGCAGGCGT TGAAGCAGGCCCGGAACGAGGCGGAAGCGCCGCAGCGGGCGGCGAACGACGCGGCGAACGCGGCTGCATTCCGCGACAAG CAGGAGCAGAATGCACTGAAGCAGGCGCAGCGCGGCGCGGAAGGGCCACAACGCGCGGCGAGCAAGCAGGCATACGACCA GAAGCAGGCGGATTTCCAGCGCAAGCTCGACCAGGCGCACCAGCAGGCGGCGCAGAAGGCGCAGGAGCGGGCGGACAACG CCACGCGCTACGAGCAGAAGCAGAAGGAAGCCGCGCAGCACAAGGCCGATGTCGAGCGGCGTCAGCAGGAAGCGGCCGAG AAGGCCAGGCAGCAGCAACAGCAGGGGCAGTAA
Upstream 100 bases:
>100_bases TGCCCGGCGGGCCCGACGGGCCAGAGGCCGCGGGTGAATGAAGCGGGGCATTTTGCCATAAATGGCGGAGCGTCCAGCCG GGGGTGATAGAATTTGACAC
Downstream 100 bases:
>100_bases CGTGTTGAATTGATCGGGATCAGTCTCGGGCGCGTCGGCACGCCAGTCGTCGCGCTGCTTCGATGAGGAGGCAAGTATGC AAAACCGTCACACGGAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: Myosin Heavy Chain
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSRSFPTTLPTSRISLVALGAALAAALSAGPSGAFAQATGASAPDTGASAPAAASAAPDFDARQKVLNQRSAENDYRYAV AEHDCYSKFFVNHCLGKARDQMREERASIRQEQLALNDEQRAVRAQQRDQQQALKQARNEAEAPQRAANDAANAAAFRDK QEQNALKQAQRGAEGPQRAASKQAYDQKQADFQRKLDQAHQQAAQKAQERADNATRYEQKQKEAAQHKADVERRQQEAAE KARQQQQQGQ
Sequences:
>Translated_250_residues MSRSFPTTLPTSRISLVALGAALAAALSAGPSGAFAQATGASAPDTGASAPAAASAAPDFDARQKVLNQRSAENDYRYAV AEHDCYSKFFVNHCLGKARDQMREERASIRQEQLALNDEQRAVRAQQRDQQQALKQARNEAEAPQRAANDAANAAAFRDK QEQNALKQAQRGAEGPQRAASKQAYDQKQADFQRKLDQAHQQAAQKAQERADNATRYEQKQKEAAQHKADVERRQQEAAE KARQQQQQGQ >Mature_249_residues SRSFPTTLPTSRISLVALGAALAAALSAGPSGAFAQATGASAPDTGASAPAAASAAPDFDARQKVLNQRSAENDYRYAVA EHDCYSKFFVNHCLGKARDQMREERASIRQEQLALNDEQRAVRAQQRDQQQALKQARNEAEAPQRAANDAANAAAFRDKQ EQNALKQAQRGAEGPQRAASKQAYDQKQADFQRKLDQAHQQAAQKAQERADNATRYEQKQKEAAQHKADVERRQQEAAEK ARQQQQQGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27415; Mature: 27284
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSFPTTLPTSRISLVALGAALAAALSAGPSGAFAQATGASAPDTGASAPAAASAAPDF CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCH DARQKVLNQRSAENDYRYAVAEHDCYSKFFVNHCLGKARDQMREERASIRQEQLALNDEQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RAVRAQQRDQQQALKQARNEAEAPQRAANDAANAAAFRDKQEQNALKQAQRGAEGPQRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SKQAYDQKQADFQRKLDQAHQQAAQKAQERADNATRYEQKQKEAAQHKADVERRQQEAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KARQQQQQGQ HHHHHHHCCC >Mature Secondary Structure SRSFPTTLPTSRISLVALGAALAAALSAGPSGAFAQATGASAPDTGASAPAAASAAPDF CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCH DARQKVLNQRSAENDYRYAVAEHDCYSKFFVNHCLGKARDQMREERASIRQEQLALNDEQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RAVRAQQRDQQQALKQARNEAEAPQRAANDAANAAAFRDKQEQNALKQAQRGAEGPQRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SKQAYDQKQADFQRKLDQAHQQAAQKAQERADNATRYEQKQKEAAQHKADVERRQQEAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KARQQQQQGQ HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA