Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689789
Identifier: 116689789
GI number: 116689789
Start: 1964662
End: 1965660
Strand: Reverse
Name: 116689789
Synonym: Bcen2424_1768
Alternate gene names: NA
Gene position: 1965660-1964662 (Counterclockwise)
Preceding gene: 116689790
Following gene: 116689788
Centisome position: 56.42
GC content: 63.16
Gene sequence:
>999_bases ATGGATTCGCTCGCCGTCACTTTCGACGAGATTCGCGATGCCTATGGGCTCGCTCGTAGCGGGCCACCGACGCAGGTCAG CGAACGCGTGTGGCGTCTGCCGACCGACGGCGGCGCAGGCGTGGCAGTCAAGCTCTATGCGCTTGAGCACCATCCGCGCG CAGTCAAGGAAACCGCCGTCCTCGCGCATCTGGAAACGCACGGCGATACTCGCTTCCATGTGCAGACGCTGAAGCGCACG CGATCCGATGCATCGCTGTGGTCAGGACAAAATTCTCACGCGATGCTGACGCGCTGGGAAGCCGGGCAATTCAAAACCTA CGATACGTTCTCGCCAACCGAATGGGACGCGCTCGGCGCGAGTCTGGCCGCGTTGCACCTGAGCCTTGAACGATTGCCTC TGCCGTCGCCCGATACGATCCGCGCGCGGCTCACCTCGATCGATGCGGACGCGGTACGCCGCAGCCTGCTGGATGCACTT GATCGAGCCGATGCGAACGTCACCGGTGCCGCGAATCTGCGCCGCTACGTCGATCTCGCGCTGCGTATGCTCGACCGCTA CTATCCGGGCAGCATCGATGCGTTTCCCGCCGACGATCCGCAGCACCCGATCCACAACGACTACAACCAGTTCAACTATC TGTTCACGGGCGCGCTGCCGCCGCTGATCCTCGACTGGGAAGCGTCGATCGGCGCACCGCGCGAATACGAGCTGGTGCGC TGCCTGAATCATTTGCCGCTGGAAGCACCGCACCTCGCGCAAGCGTTCGTGCATGCGTACCAGCGGGTACGGCCCGTGAA TCCGGCGTACATCGCGTGGGCAGTCGATGCCGCCTGCTTGCAGCACGCGCTCAAGCTCTGGATCGTGCAGGGCTGGCTCG ACGATCCATCGCGCTTCGCATCGCATCTGAACGGTGCGGTGACGATGGCGTCCGCGATGGTGAACGCGCGTGACCGTCTA ATAGATTTCTTTTCCCGCTGCGTGGAAACAGGAAGCTGA
Upstream 100 bases:
>100_bases GGTGTTGTTCCGACCGGCGATGTACAAGCTGCGCTACGTCGGACACAACACGTTCCTGACCGGTCATCCGTATCGGCACG GGCCGGCCGAGCACATCTGA
Downstream 100 bases:
>100_bases TGTGAGTGCGAATCCGAACGAGATCCCGAATCCGCCGCCGCCCGGCGAGCGGCAGCACGTGTTTCCGCCGCCGCTGGATC GCGATTACCGCGTCGAGGAC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MDSLAVTFDEIRDAYGLARSGPPTQVSERVWRLPTDGGAGVAVKLYALEHHPRAVKETAVLAHLETHGDTRFHVQTLKRT RSDASLWSGQNSHAMLTRWEAGQFKTYDTFSPTEWDALGASLAALHLSLERLPLPSPDTIRARLTSIDADAVRRSLLDAL DRADANVTGAANLRRYVDLALRMLDRYYPGSIDAFPADDPQHPIHNDYNQFNYLFTGALPPLILDWEASIGAPREYELVR CLNHLPLEAPHLAQAFVHAYQRVRPVNPAYIAWAVDAACLQHALKLWIVQGWLDDPSRFASHLNGAVTMASAMVNARDRL IDFFSRCVETGS
Sequences:
>Translated_332_residues MDSLAVTFDEIRDAYGLARSGPPTQVSERVWRLPTDGGAGVAVKLYALEHHPRAVKETAVLAHLETHGDTRFHVQTLKRT RSDASLWSGQNSHAMLTRWEAGQFKTYDTFSPTEWDALGASLAALHLSLERLPLPSPDTIRARLTSIDADAVRRSLLDAL DRADANVTGAANLRRYVDLALRMLDRYYPGSIDAFPADDPQHPIHNDYNQFNYLFTGALPPLILDWEASIGAPREYELVR CLNHLPLEAPHLAQAFVHAYQRVRPVNPAYIAWAVDAACLQHALKLWIVQGWLDDPSRFASHLNGAVTMASAMVNARDRL IDFFSRCVETGS >Mature_332_residues MDSLAVTFDEIRDAYGLARSGPPTQVSERVWRLPTDGGAGVAVKLYALEHHPRAVKETAVLAHLETHGDTRFHVQTLKRT RSDASLWSGQNSHAMLTRWEAGQFKTYDTFSPTEWDALGASLAALHLSLERLPLPSPDTIRARLTSIDADAVRRSLLDAL DRADANVTGAANLRRYVDLALRMLDRYYPGSIDAFPADDPQHPIHNDYNQFNYLFTGALPPLILDWEASIGAPREYELVR CLNHLPLEAPHLAQAFVHAYQRVRPVNPAYIAWAVDAACLQHALKLWIVQGWLDDPSRFASHLNGAVTMASAMVNARDRL IDFFSRCVETGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37014; Mature: 37014
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLAVTFDEIRDAYGLARSGPPTQVSERVWRLPTDGGAGVAVKLYALEHHPRAVKETAV CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHH LAHLETHGDTRFHVQTLKRTRSDASLWSGQNSHAMLTRWEAGQFKTYDTFSPTEWDALGA HHHHHHCCCCHHHHHHHHHHHCHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCHHHHHH SLAALHLSLERLPLPSPDTIRARLTSIDADAVRRSLLDALDRADANVTGAANLRRYVDLA HHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LRMLDRYYPGSIDAFPADDPQHPIHNDYNQFNYLFTGALPPLILDWEASIGAPREYELVR HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCCEEEECCCCCCCCCHHHHHH CLNHLPLEAPHLAQAFVHAYQRVRPVNPAYIAWAVDAACLQHALKLWIVQGWLDDPSRFA HHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SHLNGAVTMASAMVNARDRLIDFFSRCVETGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDSLAVTFDEIRDAYGLARSGPPTQVSERVWRLPTDGGAGVAVKLYALEHHPRAVKETAV CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHH LAHLETHGDTRFHVQTLKRTRSDASLWSGQNSHAMLTRWEAGQFKTYDTFSPTEWDALGA HHHHHHCCCCHHHHHHHHHHHCHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCHHHHHH SLAALHLSLERLPLPSPDTIRARLTSIDADAVRRSLLDALDRADANVTGAANLRRYVDLA HHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LRMLDRYYPGSIDAFPADDPQHPIHNDYNQFNYLFTGALPPLILDWEASIGAPREYELVR HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCCEEEECCCCCCCCCHHHHHH CLNHLPLEAPHLAQAFVHAYQRVRPVNPAYIAWAVDAACLQHALKLWIVQGWLDDPSRFA HHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SHLNGAVTMASAMVNARDRLIDFFSRCVETGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA