Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689790

Identifier: 116689790

GI number: 116689790

Start: 1965661

End: 1966410

Strand: Reverse

Name: 116689790

Synonym: Bcen2424_1769

Alternate gene names: NA

Gene position: 1966410-1965661 (Counterclockwise)

Preceding gene: 116689791

Following gene: 116689789

Centisome position: 56.44

GC content: 64.27

Gene sequence:

>750_bases
ATGCAGGATCATCCTCTCCCGCTCGACCTGTCCGGCCTTGCGCCCAGCCTGTACGCGCAGGGCACCGAGGAGGGCATCCT
GTCGCGCCTGATGGAGCGGATCGCGCCGACCAACCGCTTCTGCGTCGATATCGGCGCGAGCGACGGCCTGCGCAACAGCA
ATACCGCGCGGCTGCTACGCGAACAGGATTGGGCCGGCGTACTGGTGGAAGGCAGCGCATACCGGTTCGGCAAGCTCGCC
GCGCACTACGCGGGCGTGGAACGTGTCCGCCTGCACCACGATCGCGTCCAGCCCGACACGGTCGACCCACTGCTCGTCGA
CGCGAACGTACCGACCGACTTCGACCTGCTGTCGATCGACATCGACGGTAACGATTACTGGGTATGGCGCGGCCTGCAGG
CGTTCCAGCCGCGCATCGTCGTGATCGAATACAACCCGTACTACACGCCGCCCGAGCGCTGGGTCATGTGCTTCAATCCG
GACCACGAATGGGACGGCTCGACTTATTACGGCGCGAGCCTCGAATCGCTCGTGCATCTCGGCAGGCAGAAGGGCTATGA
GCTCGTTTGCTGCGACGACATGGGCAACAACGCGTTCTTCGTGCGACGCGACCTGTACCCGCTGCTCGGCATCGCGAACA
ACGATCCGTCGGTGTTGTTCCGACCGGCGATGTACAAGCTGCGCTACGTCGGACACAACACGTTCCTGACCGGTCATCCG
TATCGGCACGGGCCGGCCGAGCACATCTGA

Upstream 100 bases:

>100_bases
CGATGCTGGACATCCCAGTTTCCCCTGCTCAATCGACTTCAGGTAAATTACCCACCGAACACCGCCCATCATTCCCCATT
TCGCCCCGGAGCCGCCTTCG

Downstream 100 bases:

>100_bases
ATGGATTCGCTCGCCGTCACTTTCGACGAGATTCGCGATGCCTATGGGCTCGCTCGTAGCGGGCCACCGACGCAGGTCAG
CGAACGCGTGTGGCGTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MQDHPLPLDLSGLAPSLYAQGTEEGILSRLMERIAPTNRFCVDIGASDGLRNSNTARLLREQDWAGVLVEGSAYRFGKLA
AHYAGVERVRLHHDRVQPDTVDPLLVDANVPTDFDLLSIDIDGNDYWVWRGLQAFQPRIVVIEYNPYYTPPERWVMCFNP
DHEWDGSTYYGASLESLVHLGRQKGYELVCCDDMGNNAFFVRRDLYPLLGIANNDPSVLFRPAMYKLRYVGHNTFLTGHP
YRHGPAEHI

Sequences:

>Translated_249_residues
MQDHPLPLDLSGLAPSLYAQGTEEGILSRLMERIAPTNRFCVDIGASDGLRNSNTARLLREQDWAGVLVEGSAYRFGKLA
AHYAGVERVRLHHDRVQPDTVDPLLVDANVPTDFDLLSIDIDGNDYWVWRGLQAFQPRIVVIEYNPYYTPPERWVMCFNP
DHEWDGSTYYGASLESLVHLGRQKGYELVCCDDMGNNAFFVRRDLYPLLGIANNDPSVLFRPAMYKLRYVGHNTFLTGHP
YRHGPAEHI
>Mature_249_residues
MQDHPLPLDLSGLAPSLYAQGTEEGILSRLMERIAPTNRFCVDIGASDGLRNSNTARLLREQDWAGVLVEGSAYRFGKLA
AHYAGVERVRLHHDRVQPDTVDPLLVDANVPTDFDLLSIDIDGNDYWVWRGLQAFQPRIVVIEYNPYYTPPERWVMCFNP
DHEWDGSTYYGASLESLVHLGRQKGYELVCCDDMGNNAFFVRRDLYPLLGIANNDPSVLFRPAMYKLRYVGHNTFLTGHP
YRHGPAEHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28307; Mature: 28307

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDHPLPLDLSGLAPSLYAQGTEEGILSRLMERIAPTNRFCVDIGASDGLRNSNTARLLR
CCCCCCCEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHC
EQDWAGVLVEGSAYRFGKLAAHYAGVERVRLHHDRVQPDTVDPLLVDANVPTDFDLLSID
CCCCCEEEEECCCCCHHHHHHHHHCHHHEEEHHCCCCCCCCCCEEEECCCCCCCEEEEEE
IDGNDYWVWRGLQAFQPRIVVIEYNPYYTPPERWVMCFNPDHEWDGSTYYGASLESLVHL
ECCCCEEEEECHHHCCCEEEEEEECCCCCCHHHEEEEECCCCCCCCCEEECCCHHHHHHH
GRQKGYELVCCDDMGNNAFFVRRDLYPLLGIANNDPSVLFRPAMYKLRYVGHNTFLTGHP
HHHCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCEEECCCEEEEEEECCCEEEECCC
YRHGPAEHI
CCCCCCCCC
>Mature Secondary Structure
MQDHPLPLDLSGLAPSLYAQGTEEGILSRLMERIAPTNRFCVDIGASDGLRNSNTARLLR
CCCCCCCEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHC
EQDWAGVLVEGSAYRFGKLAAHYAGVERVRLHHDRVQPDTVDPLLVDANVPTDFDLLSID
CCCCCEEEEECCCCCHHHHHHHHHCHHHEEEHHCCCCCCCCCCEEEECCCCCCCEEEEEE
IDGNDYWVWRGLQAFQPRIVVIEYNPYYTPPERWVMCFNPDHEWDGSTYYGASLESLVHL
ECCCCEEEEECHHHCCCEEEEEEECCCCCCHHHEEEEECCCCCCCCCEEECCCHHHHHHH
GRQKGYELVCCDDMGNNAFFVRRDLYPLLGIANNDPSVLFRPAMYKLRYVGHNTFLTGHP
HHHCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCEEECCCEEEEEEECCCEEEECCC
YRHGPAEHI
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA