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The map label for this gene is ompW [C]

Identifier: 116689777

GI number: 116689777

Start: 1953672

End: 1954310

Strand: Reverse

Name: ompW [C]

Synonym: Bcen2424_1756

Alternate gene names: 116689777

Gene position: 1954310-1953672 (Counterclockwise)

Preceding gene: 116689778

Following gene: 116689772

Centisome position: 56.1

GC content: 63.69

Gene sequence:

>639_bases
ATGCATAAAACGATTCGAACTTGTGTCACCGCCGCCGTCGTCGCGGCCGCCATCGCGATGCCGTCGCTGTCGCACGCGGC
GTCGCCGGGCGACGGCATCAACCAGGGTGACGTACTGGTCCGGCTGCGCGCGATCAGCATCCAGCCGAACGAGCGCGCGA
GCGACACGCTCGGCGCGATTAACACCGGCGTGAACAACGCGATCGTGCCTGAACTCGACTTCACGTACATGATCCGCGAC
TACCTCGGCGTCGAGCTGATCCTCGGCACGTCGCGGCATCAGCTGACGTCGAGCCTCGGCAATCTCGGCGGCGTGGGCGT
GCTGCCGCCGACGCTCTTGCTGCAGTATCACTTCAACCATGCGGGCAAGGTGCGCCCGTACGTCGGCGCCGGGTTGAACT
ACACGTACTTCTACAACAACGGGCTCAACGTCGGCGGGGAGGGCGTGTCGATCAACAAGAGCAGCTTCGGCCCCGCGCTG
CAGTTCGGCGTGGACGTGCAGTTGACCAAGAAGGTGTTCATGAACGTCGACGTGAAGAAGATCTGGATGAGCACCGATGC
GACGCTGGGCGACAAGGGCATCGGCACGCTGCACATCGATCCGCTGATCGTCGGCGTGGGCGTCGGGATGAAGTTCTAG

Upstream 100 bases:

>100_bases
CTGCGGCAAACCGTCCCACGTTTACGCTGGCTTGACCAATATCAAGATGACGAAAAGACCCTACAGGGAGAATGGAAACC
ATTCTTTGGGGGTCCGTACC

Downstream 100 bases:

>100_bases
GCGCGACGGAGCAAGAACAGAGTTGGGGTTGGCGGCATGGCGGTCTGCATGCCGCTTTTTTTATGCGCATTTATGTGCGG
GCGTCGCGGGCGGTGTCGGG

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MHKTIRTCVTAAVVAAAIAMPSLSHAASPGDGINQGDVLVRLRAISIQPNERASDTLGAINTGVNNAIVPELDFTYMIRD
YLGVELILGTSRHQLTSSLGNLGGVGVLPPTLLLQYHFNHAGKVRPYVGAGLNYTYFYNNGLNVGGEGVSINKSSFGPAL
QFGVDVQLTKKVFMNVDVKKIWMSTDATLGDKGIGTLHIDPLIVGVGVGMKF

Sequences:

>Translated_212_residues
MHKTIRTCVTAAVVAAAIAMPSLSHAASPGDGINQGDVLVRLRAISIQPNERASDTLGAINTGVNNAIVPELDFTYMIRD
YLGVELILGTSRHQLTSSLGNLGGVGVLPPTLLLQYHFNHAGKVRPYVGAGLNYTYFYNNGLNVGGEGVSINKSSFGPAL
QFGVDVQLTKKVFMNVDVKKIWMSTDATLGDKGIGTLHIDPLIVGVGVGMKF
>Mature_212_residues
MHKTIRTCVTAAVVAAAIAMPSLSHAASPGDGINQGDVLVRLRAISIQPNERASDTLGAINTGVNNAIVPELDFTYMIRD
YLGVELILGTSRHQLTSSLGNLGGVGVLPPTLLLQYHFNHAGKVRPYVGAGLNYTYFYNNGLNVGGEGVSINKSSFGPAL
QFGVDVQLTKKVFMNVDVKKIWMSTDATLGDKGIGTLHIDPLIVGVGVGMKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=218, Percent_Identity=33.0275229357798, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22466; Mature: 22466

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKTIRTCVTAAVVAAAIAMPSLSHAASPGDGINQGDVLVRLRAISIQPNERASDTLGAI
CCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHH
NTGVNNAIVPELDFTYMIRDYLGVELILGTSRHQLTSSLGNLGGVGVLPPTLLLQYHFNH
HCCCCCCCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHEEEECCCC
AGKVRPYVGAGLNYTYFYNNGLNVGGEGVSINKSSFGPALQFGVDVQLTKKVFMNVDVKK
CCCCCCEECCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEECCCCEEEHHHHHCCCHHE
IWMSTDATLGDKGIGTLHIDPLIVGVGVGMKF
EEEECCCCCCCCCCEEEEECEEEEEECCCCCC
>Mature Secondary Structure
MHKTIRTCVTAAVVAAAIAMPSLSHAASPGDGINQGDVLVRLRAISIQPNERASDTLGAI
CCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHH
NTGVNNAIVPELDFTYMIRDYLGVELILGTSRHQLTSSLGNLGGVGVLPPTLLLQYHFNH
HCCCCCCCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHEEEECCCC
AGKVRPYVGAGLNYTYFYNNGLNVGGEGVSINKSSFGPALQFGVDVQLTKKVFMNVDVKK
CCCCCCEECCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEECCCCEEEHHHHHCCCHHE
IWMSTDATLGDKGIGTLHIDPLIVGVGVGMKF
EEEECCCCCCCCCCEEEEECEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]