Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689778
Identifier: 116689778
GI number: 116689778
Start: 1954376
End: 1955566
Strand: Reverse
Name: 116689778
Synonym: Bcen2424_1757
Alternate gene names: NA
Gene position: 1955566-1954376 (Counterclockwise)
Preceding gene: 116689779
Following gene: 116689777
Centisome position: 56.13
GC content: 69.52
Gene sequence:
>1191_bases ATGACCGTACGCACTTCCTTTCCGCCGCTGACGATCCGCGGCCGCACCTTGCTGCCAGTCGTGCAGGGCGGCATGGGCGT CGGCATCTCCGCGCACCGGCTGGCGGGCAGCGTCGCGCGCGAAGGCGCGGTCGGCACGATCGCGAGCATCGACCTGCGCC ACCATCATGCGGACCTGCTCGCGCGGTGTCGCGCGCAACCCGATCGCGCGACGCTCGAGGCGGCGAACCTCGACGCGCTC GCGCGCGAGATCCGTCTCGCGAAAACGTACAGCGAAGGGCGCGGGATGATCGCGGTCAACGTGATGAAGGCGGTGAGCGC GCAGGCGGACTACGTGCGGGTCGCGTGCGACGAGGGCGCGGATGCGATCGTGATGGGCGCGGGCCTGCCGCTCGATCTGC CCGACCTCACGCAAGGGCACGACGTCGCGCTGATCCCGATCCTGTCGGACAGCCGCGGGATCGCGCTGGTGCTGAAGAAG TGGATGAAGAAGGGGCGCCTGCCCGATGCGATCGTGATCGAGCATCCGGCGCACGCGGGCGGGCACCTCGGCGTCACGCA GATCGACGACATGCACGACGCCCGCTTCGATTTCGCACGCGTGCTGGACGAGGCCGCGCAGGTGATGGCATCGCTCGGCA TCGCTCGCGACACGATCCCGTTGATCGTGGCCGGCGGGATCAACAGTCACGACACGGTGCGCGCGGCGTTCGCGGCCGGC GCGAATGGCGTGCAGGTCGGGACGCCGTTCGCGGTGACCGAAGAGGGCGACGCGCATCCGCACTTCAAGCGCGTGCTCGC CGATGCGACGCCGGACGACATCGTCGAATTCGTCAGCGTGACGGGCCTGCCCGCGCGAGCGGTGAAGACGCCGTGGCTCG ATCGTTACCTGCGCAACGAGACGCGCATTCGCAACAAGCTCGGCGCGTTCAAGCAGCGCTGCCCGACCGCGCTCGAATGC CTGAGCGTATGCGGGCTGCGCGACGGCATCGAGAAGTTCGGCCACTTCTGCATCGACACGCGGCTCGCGGCCGCGCTGCG CGGCGACGTCGCGAACGGGCTGTTCTTCCGCGGCCGCGAAGCCTTGCCGTTCGGCCGTGCGATCCGCAGCGTGCGCGATC TGCTCGACCTGCTGCTGACGGGCAGTGCGACCGAGCCTGCGGCAAACCGTCCCACGTTTACGCTGGCTTGA
Upstream 100 bases:
>100_bases AATACGGCACGCTTGCGTGCCGTTTTTTATTGACGGCCGTCAAGGTGCGCGGCGGTGGATCGTCGATCATCGCGGTTCCG ATGTTCCGACGAGGTTTCAG
Downstream 100 bases:
>100_bases CCAATATCAAGATGACGAAAAGACCCTACAGGGAGAATGGAAACCATTCTTTGGGGGTCCGTACCATGCATAAAACGATT CGAACTTGTGTCACCGCCGC
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Enoyl-(Acyl-Carrier-Protein) Reductase II; 2-Nitropropane Dioxygenase-Like Protein; Oxidoreductase; Enoyl-[Acyl-Carrier Protein] Reductase; 2-Nitropropane Dioxygenase Npd; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Trans-2-Enoyl-ACP Reductase; Enoyl-(Acyl-Carrier-Protein) Reductase; Dioxygenase; Enoyl-ACP Reductase; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; Dioxygenases Related 2-Nitropropane Dioxygenase; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier-Protein] Reductase; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTVRTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLLARCRAQPDRATLEAANLDAL AREIRLAKTYSEGRGMIAVNVMKAVSAQADYVRVACDEGADAIVMGAGLPLDLPDLTQGHDVALIPILSDSRGIALVLKK WMKKGRLPDAIVIEHPAHAGGHLGVTQIDDMHDARFDFARVLDEAAQVMASLGIARDTIPLIVAGGINSHDTVRAAFAAG ANGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNETRIRNKLGAFKQRCPTALEC LSVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGREALPFGRAIRSVRDLLDLLLTGSATEPAANRPTFTLA
Sequences:
>Translated_396_residues MTVRTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLLARCRAQPDRATLEAANLDAL AREIRLAKTYSEGRGMIAVNVMKAVSAQADYVRVACDEGADAIVMGAGLPLDLPDLTQGHDVALIPILSDSRGIALVLKK WMKKGRLPDAIVIEHPAHAGGHLGVTQIDDMHDARFDFARVLDEAAQVMASLGIARDTIPLIVAGGINSHDTVRAAFAAG ANGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNETRIRNKLGAFKQRCPTALEC LSVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGREALPFGRAIRSVRDLLDLLLTGSATEPAANRPTFTLA >Mature_395_residues TVRTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLLARCRAQPDRATLEAANLDALA REIRLAKTYSEGRGMIAVNVMKAVSAQADYVRVACDEGADAIVMGAGLPLDLPDLTQGHDVALIPILSDSRGIALVLKKW MKKGRLPDAIVIEHPAHAGGHLGVTQIDDMHDARFDFARVLDEAAQVMASLGIARDTIPLIVAGGINSHDTVRAAFAAGA NGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNETRIRNKLGAFKQRCPTALECL SVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGREALPFGRAIRSVRDLLDLLLTGSATEPAANRPTFTLA
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42291; Mature: 42160
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLL CCCCCCCCCEEECCCEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH ARCRAQPDRATLEAANLDALAREIRLAKTYSEGRGMIAVNVMKAVSAQADYVRVACDEGA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCEEEEEECCCC DAIVMGAGLPLDLPDLTQGHDVALIPILSDSRGIALVLKKWMKKGRLPDAIVIEHPAHAG CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC GHLGVTQIDDMHDARFDFARVLDEAAQVMASLGIARDTIPLIVAGGINSHDTVRAAFAAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCC ANGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNE CCCCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH TRIRNKLGAFKQRCPTALECLSVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGRE HHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC ALPFGRAIRSVRDLLDLLLTGSATEPAANRPTFTLA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECC >Mature Secondary Structure TVRTSFPPLTIRGRTLLPVVQGGMGVGISAHRLAGSVAREGAVGTIASIDLRHHHADLL CCCCCCCCEEECCCEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH ARCRAQPDRATLEAANLDALAREIRLAKTYSEGRGMIAVNVMKAVSAQADYVRVACDEGA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCEEEEEECCCC DAIVMGAGLPLDLPDLTQGHDVALIPILSDSRGIALVLKKWMKKGRLPDAIVIEHPAHAG CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC GHLGVTQIDDMHDARFDFARVLDEAAQVMASLGIARDTIPLIVAGGINSHDTVRAAFAAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCC ANGVQVGTPFAVTEEGDAHPHFKRVLADATPDDIVEFVSVTGLPARAVKTPWLDRYLRNE CCCCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH TRIRNKLGAFKQRCPTALECLSVCGLRDGIEKFGHFCIDTRLAAALRGDVANGLFFRGRE HHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC ALPFGRAIRSVRDLLDLLLTGSATEPAANRPTFTLA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA