Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is corA [H]
Identifier: 116689742
GI number: 116689742
Start: 1914256
End: 1915233
Strand: Reverse
Name: corA [H]
Synonym: Bcen2424_1721
Alternate gene names: 116689742
Gene position: 1915233-1914256 (Counterclockwise)
Preceding gene: 116689744
Following gene: 116689740
Centisome position: 54.97
GC content: 62.47
Gene sequence:
>978_bases ATGCTGATCAACTGTGCTGCTTACCAGGACGGCCGCAAGCTGGCCGATATCGACATCGACGCCATCAGCGATTACGTGTC GAAGCCCGAATGCTTCGTGTGGGTCGCGCTGAAGGACCCGACGCCCGAGGAAATCGACCTGATGGGCGAGGAATTCGGTT TGCACGAGCTGGCGCTCGAGGATGCCCGCAAAGGCCATCAGCGGCCGAAGATCGAGGAATACGGCGATTCGCTGTTCGCG GTGCTGCACACGGTCGAACTCGACGAGGACGACGAATTCAAGGTCGGCGAATTGAACGTATTCGTCGGCCCGAATTACGT GCTGTCGATCCGCAACCATACCGAGCACGATTTCCGCGACGTGCGCAAGCGTTGCGAGCGCGAGCCGCACTTGTTGCGGG AGGGTTCGGCGTTCGTGTTCTACGCGTTGATGGACCAGGTCGTCGACCGGTATTTCCCGATCCTCGAAACGCTCGGAGCG GAACTCGAGGAGCTCGAGGACCGCATCTTCGCGAAGGCGACGCCGGCGTCGTCGCGCGCGATCATCGAGGATCTCTATTC TCTGAAGCGCCGGCTCGTGCTGCTGTACCAGCACACGGCGCCGCTGATGGAGCCGCTCTCGAAGCTCACCGGCGGGCGCG TGCCGCAGGTGTGCAGCGGGATGGCGGCTTACTTCCGCGACGTGTACGACCATCTGCAGCGGATCGTGAAGACGATCGAA GGGCGGCGCGAAATGGTCGTCACGGCGATCCAGGTGAACCTCGGGATGATTTCGCTCGCGGAGAACGAGGTGACCAAGCG GCTCGGCTCGTTCGCCGCGCTGTTCGCGATACCGACGATGATCGCCGGCATCTACGGGATGAACTTCGCGAACATGCCCG AGCTGCACCTGAAATACGGGTTCTACGGCTGCATCGCGGTGATGGCCATCGCCGACCTCGCGCTGTGGTGGCGTTTCAAG CGGGCGGGGTGGCTGTAG
Upstream 100 bases:
>100_bases ACGCAGCCCGATCATGACCAATATCGGCGTGCCGCGCAAGCCGGGCCGTTCATGCAGCAAACCGGTAAACTGATGCGCAA ACCGCAACGTCACGAATACC
Downstream 100 bases:
>100_bases CCAGGCCTCACGCCGGACGCGGCGCGTGCTTGCCGACCACGACGCGCCACGGCCGCACGCGCCACGATTTCACGAGGCCG TTCTGCACGTACGGATCGGC
Product: magnesium and cobalt transport protein CorA
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MLINCAAYQDGRKLADIDIDAISDYVSKPECFVWVALKDPTPEEIDLMGEEFGLHELALEDARKGHQRPKIEEYGDSLFA VLHTVELDEDDEFKVGELNVFVGPNYVLSIRNHTEHDFRDVRKRCEREPHLLREGSAFVFYALMDQVVDRYFPILETLGA ELEELEDRIFAKATPASSRAIIEDLYSLKRRLVLLYQHTAPLMEPLSKLTGGRVPQVCSGMAAYFRDVYDHLQRIVKTIE GRREMVVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFANMPELHLKYGFYGCIAVMAIADLALWWRFK RAGWL
Sequences:
>Translated_325_residues MLINCAAYQDGRKLADIDIDAISDYVSKPECFVWVALKDPTPEEIDLMGEEFGLHELALEDARKGHQRPKIEEYGDSLFA VLHTVELDEDDEFKVGELNVFVGPNYVLSIRNHTEHDFRDVRKRCEREPHLLREGSAFVFYALMDQVVDRYFPILETLGA ELEELEDRIFAKATPASSRAIIEDLYSLKRRLVLLYQHTAPLMEPLSKLTGGRVPQVCSGMAAYFRDVYDHLQRIVKTIE GRREMVVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFANMPELHLKYGFYGCIAVMAIADLALWWRFK RAGWL >Mature_325_residues MLINCAAYQDGRKLADIDIDAISDYVSKPECFVWVALKDPTPEEIDLMGEEFGLHELALEDARKGHQRPKIEEYGDSLFA VLHTVELDEDDEFKVGELNVFVGPNYVLSIRNHTEHDFRDVRKRCEREPHLLREGSAFVFYALMDQVVDRYFPILETLGA ELEELEDRIFAKATPASSRAIIEDLYSLKRRLVLLYQHTAPLMEPLSKLTGGRVPQVCSGMAAYFRDVYDHLQRIVKTIE GRREMVVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFANMPELHLKYGFYGCIAVMAIADLALWWRFK RAGWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=315, Percent_Identity=25.3968253968254, Blast_Score=75, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6321058, Length=139, Percent_Identity=27.3381294964029, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6324442, Length=139, Percent_Identity=28.0575539568345, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37057; Mature: 37057
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINCAAYQDGRKLADIDIDAISDYVSKPECFVWVALKDPTPEEIDLMGEEFGLHELALE CEEEECCCCCCCEEECCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHH DARKGHQRPKIEEYGDSLFAVLHTVELDEDDEFKVGELNVFVGPNYVLSIRNHTEHDFRD HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEEEECCCCCHHHHH VRKRCEREPHLLREGSAFVFYALMDQVVDRYFPILETLGAELEELEDRIFAKATPASSRA HHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IIEDLYSLKRRLVLLYQHTAPLMEPLSKLTGGRVPQVCSGMAAYFRDVYDHLQRIVKTIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GRREMVVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFANMPELHLKYG CCHHHEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FYGCIAVMAIADLALWWRFKRAGWL HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLINCAAYQDGRKLADIDIDAISDYVSKPECFVWVALKDPTPEEIDLMGEEFGLHELALE CEEEECCCCCCCEEECCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHH DARKGHQRPKIEEYGDSLFAVLHTVELDEDDEFKVGELNVFVGPNYVLSIRNHTEHDFRD HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEEEECCCCCHHHHH VRKRCEREPHLLREGSAFVFYALMDQVVDRYFPILETLGAELEELEDRIFAKATPASSRA HHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IIEDLYSLKRRLVLLYQHTAPLMEPLSKLTGGRVPQVCSGMAAYFRDVYDHLQRIVKTIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GRREMVVTAIQVNLGMISLAENEVTKRLGSFAALFAIPTMIAGIYGMNFANMPELHLKYG CCHHHEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FYGCIAVMAIADLALWWRFKRAGWL HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]