Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689740

Identifier: 116689740

GI number: 116689740

Start: 1913000

End: 1913488

Strand: Reverse

Name: 116689740

Synonym: Bcen2424_1719

Alternate gene names: NA

Gene position: 1913488-1913000 (Counterclockwise)

Preceding gene: 116689742

Following gene: 116689739

Centisome position: 54.92

GC content: 62.17

Gene sequence:

>489_bases
ATGCCGGTCTCAGCCACCCTGCAGGATTGCCTGCGCCAGAAGTCATCGCGGTACGAAGTCGTGTACCACCCCTATAGTCA
TACGAGCATGGAGACGGCCGCCGCCGCGCATATTCCCGGCGATCGTCTCGCGAAAACCGTGCTTCTCGAGGACGCCGAAG
GCTACGTCGCCGCTGTATTGCCGACGACGCACGCCGTGCGCCTGTCGGATCTCTGGGTGAAGACGGGGCGCCATCTCGTG
CTCGCGCGGGAGGTCGAGTTGCGCGAGTTGTTCAAGGATTGCGACATGGGCGCGCTGCCGCCGGTCTGCATGGCGTACGG
GATGAAGACGTTTCTCGAGGAACACCTCGCGCAGCAGCCGGAAGTCTATTTCGAGGCCGGCGATCATCAAGCGCTGATTC
ACATGATGCAGGACGAATTCCTGATGCTGATGGAGACGGCCGAGCGCGCGCATTTCTCGCACCGGATGCAGGGGATGATG
CTGTCCTGA

Upstream 100 bases:

>100_bases
CGAGGGCATTTCCATTGGGCCGGAATGCGACCTATGCTGAACGAATCCGGAGCGAACGCCGTTCGCCCTATTCGTCCGAT
TCGCCCAGACGAGGTGCGCC

Downstream 100 bases:

>100_bases
GCGATGCGGGTCGTGTGTCGATGAAGCATGCGCGGGCATTTTCCCGCCGGGCTCGGTGAGGTGGGGATGCCCGTGCGTGC
AGAGGGGCGGGCAACGAATT

Product: YbaK/prolyl-tRNA synthetase associated region

Products: NA

Alternate protein names: YbaK-Like Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; YbaK / Prolyl-TRNA Synthetases Associated Domain Protein; YbaK/Aminoacyl-TRNA Synthetase Associated Region

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MPVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDAEGYVAAVLPTTHAVRLSDLWVKTGRHLV
LAREVELRELFKDCDMGALPPVCMAYGMKTFLEEHLAQQPEVYFEAGDHQALIHMMQDEFLMLMETAERAHFSHRMQGMM
LS

Sequences:

>Translated_162_residues
MPVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDAEGYVAAVLPTTHAVRLSDLWVKTGRHLV
LAREVELRELFKDCDMGALPPVCMAYGMKTFLEEHLAQQPEVYFEAGDHQALIHMMQDEFLMLMETAERAHFSHRMQGMM
LS
>Mature_161_residues
PVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDAEGYVAAVLPTTHAVRLSDLWVKTGRHLVL
AREVELRELFKDCDMGALPPVCMAYGMKTFLEEHLAQQPEVYFEAGDHQALIHMMQDEFLMLMETAERAHFSHRMQGMML
S

Specific function: Unknown

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18377; Mature: 18246

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDAEGYVAAVL
CCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEE
PTTHAVRLSDLWVKTGRHLVLAREVELRELFKDCDMGALPPVCMAYGMKTFLEEHLAQQP
CCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
EVYFEAGDHQALIHMMQDEFLMLMETAERAHFSHRMQGMMLS
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PVSATLQDCLRQKSSRYEVVYHPYSHTSMETAAAAHIPGDRLAKTVLLEDAEGYVAAVL
CCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEE
PTTHAVRLSDLWVKTGRHLVLAREVELRELFKDCDMGALPPVCMAYGMKTFLEEHLAQQP
CCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
EVYFEAGDHQALIHMMQDEFLMLMETAERAHFSHRMQGMMLS
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA