Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is cobI [H]
Identifier: 116689694
GI number: 116689694
Start: 1859195
End: 1859929
Strand: Reverse
Name: cobI [H]
Synonym: Bcen2424_1672
Alternate gene names: 116689694
Gene position: 1859929-1859195 (Counterclockwise)
Preceding gene: 116689695
Following gene: 116689693
Centisome position: 53.39
GC content: 68.03
Gene sequence:
>735_bases ATGACGACCGCACGCGGACGGCTGTTCGGGGTCGGCGTCGGCCCCGGCGATCCCGAGCTGATGACGATCAAGGCGCTGCG CGTGCTGCAGGCGGCGCCGGTGGTCGCGTATTTCGTCGCGAAGGGCAAGAAAGGCAACGCGTACGGCATCGTCGAAGCGC ACCTGCTCGACGGGCAGACGCAACTGCCGCTGGTCTACCCGGTGACGACGGAGGCGCTGCCGCCGCCGCTCTGCTACGAG ACGGTGATCGCCAATTTCTACGACACCGCGGCCGAGATCGTCGCGGCGCACCTCGATGCGGGCCGCGACGTCGCGGTGAT CTGCGAAGGCGATCCGTTCTTCTACGGCTCGTACATGTACCTGCACGATCGCCTCGCGCCGCGTTACGACACCGAGGTGA TCCCGGGCGTATGCGCGATGCTCGGCGGCACGGCCGTGCTCGGCCAGCCGCTCGTCTATCGCAACCAGAGCCTGTCGGTG CTGTCGGGCGTGCTGCCCGAGCATGAACTGCGCGAGCGGCTCGCGCGGGCCGACGCGGCCGTCGTGATGAAGCTCGGCCG CAATTTCGACAAGGTGCGGCGCGTGCTCGACGAACTCGGGCTCGCGAAGCGCGCGCGGTACGTCGAGCGCGCGACGATGG CGAACCAGCGCATCGTTCCGCTCGACGAGGTCGATCCGATGGCGTCGCCGTATTTCTCGCTGCTCGTCGTGCCGGGGGAA AAATGGCAAGGATGA
Upstream 100 bases:
>100_bases ACGCCGACAGCCGCGGCGTGCCGTACGTCGCGCTGCTCGGCCGGCGCGGCGGCAGTGCGATGGCCGCCGCCGCGGTCAAT GCGCTTGCGACGGAGGTCGA
Downstream 100 bases:
>100_bases CGACCCCGCCCGCGATCGTGATTCTCGGCGCGGGCGCGCTCGATACCGCGCGACGCATCCAGGCGCGTTACCCGGGCGCC CGGGTGCACGGTCTCGCATC
Product: precorrin-2 C(20)-methyltransferase
Products: NA
Alternate protein names: S-adenosyl-L-methionine--precorrin-2 methyltransferase; SP2MT [H]
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTTARGRLFGVGVGPGDPELMTIKALRVLQAAPVVAYFVAKGKKGNAYGIVEAHLLDGQTQLPLVYPVTTEALPPPLCYE TVIANFYDTAAEIVAAHLDAGRDVAVICEGDPFFYGSYMYLHDRLAPRYDTEVIPGVCAMLGGTAVLGQPLVYRNQSLSV LSGVLPEHELRERLARADAAVVMKLGRNFDKVRRVLDELGLAKRARYVERATMANQRIVPLDEVDPMASPYFSLLVVPGE KWQG
Sequences:
>Translated_244_residues MTTARGRLFGVGVGPGDPELMTIKALRVLQAAPVVAYFVAKGKKGNAYGIVEAHLLDGQTQLPLVYPVTTEALPPPLCYE TVIANFYDTAAEIVAAHLDAGRDVAVICEGDPFFYGSYMYLHDRLAPRYDTEVIPGVCAMLGGTAVLGQPLVYRNQSLSV LSGVLPEHELRERLARADAAVVMKLGRNFDKVRRVLDELGLAKRARYVERATMANQRIVPLDEVDPMASPYFSLLVVPGE KWQG >Mature_243_residues TTARGRLFGVGVGPGDPELMTIKALRVLQAAPVVAYFVAKGKKGNAYGIVEAHLLDGQTQLPLVYPVTTEALPPPLCYET VIANFYDTAAEIVAAHLDAGRDVAVICEGDPFFYGSYMYLHDRLAPRYDTEVIPGVCAMLGGTAVLGQPLVYRNQSLSVL SGVLPEHELRERLARADAAVVMKLGRNFDKVRRVLDELGLAKRARYVERATMANQRIVPLDEVDPMASPYFSLLVVPGEK WQG
Specific function: Methylates precorrin-2 at the C-20 position to produce precorrin-3A [H]
COG id: COG2243
COG function: function code H; Precorrin-2 methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR012382 - InterPro: IPR006364 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.130 [H]
Molecular weight: Translated: 26631; Mature: 26500
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTARGRLFGVGVGPGDPELMTIKALRVLQAAPVVAYFVAKGKKGNAYGIVEAHLLDGQT CCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC QLPLVYPVTTEALPPPLCYETVIANFYDTAAEIVAAHLDAGRDVAVICEGDPFFYGSYMY CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCEEE LHDRLAPRYDTEVIPGVCAMLGGTAVLGQPLVYRNQSLSVLSGVLPEHELRERLARADAA EECCCCCCCCCHHHHHHHHHHCCHHHHCCCEEECCCCHHHHHHCCCHHHHHHHHHHHHHH VVMKLGRNFDKVRRVLDELGLAKRARYVERATMANQRIVPLDEVDPMASPYFSLLVVPGE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEECCC KWQG CCCC >Mature Secondary Structure TTARGRLFGVGVGPGDPELMTIKALRVLQAAPVVAYFVAKGKKGNAYGIVEAHLLDGQT CCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC QLPLVYPVTTEALPPPLCYETVIANFYDTAAEIVAAHLDAGRDVAVICEGDPFFYGSYMY CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCEEE LHDRLAPRYDTEVIPGVCAMLGGTAVLGQPLVYRNQSLSVLSGVLPEHELRERLARADAA EECCCCCCCCCHHHHHHHHHHCCHHHHCCCEEECCCCHHHHHHCCCHHHHHHHHHHHHHH VVMKLGRNFDKVRRVLDELGLAKRARYVERATMANQRIVPLDEVDPMASPYFSLLVVPGE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEECCC KWQG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]