Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689686
Identifier: 116689686
GI number: 116689686
Start: 1849961
End: 1850383
Strand: Reverse
Name: 116689686
Synonym: Bcen2424_1664
Alternate gene names: NA
Gene position: 1850383-1849961 (Counterclockwise)
Preceding gene: 116689687
Following gene: 116689677
Centisome position: 53.11
GC content: 71.16
Gene sequence:
>423_bases ATGAGCACCGGGCCGGATACCCTCGCCGTCATCAAGGAACGCGCCACGATCGTGTGCCGCCAGCGCAGCAGCGTGCTGCT GGTCGCGCGCACCGCGGCGCGCTGGTCGCTGCCCGGCGGCACGATCCGGCGCGGCGAGACGCCGCTCCAGGCCGCGCAGC GGGAGCTCGCGGAGGAAACGCGGCTGGAGGGGCTCGCGCTCGACTACGCGGTGCAGTTCGGCGGGCTGACGAAGCTGCAT CACGTGTTCGTGGCCGACGTGCCGGCGCACCTGACGCCGCGTGCCAGCAACGAGATCGCCCGCTGCAAGTGGTTCACCGT CGATCGGCTCGACACGCTGCAGGCCAGCGTGCCGACGCGCAAGATCATCGAGCTGCTGCGGCTCGACTGTTTTTCTGCGT TCGCGAGCGGGCCGCTGCGCTGA
Upstream 100 bases:
>100_bases AACATCGGCGCGGCGGCCTGCATGCCGTCGCCGTCTGCTGCCGGCCCCCGCATGGCCGGCGCCGGTTTTTCTCCACGATT CAGCACCTGTTTTGCCGAAC
Downstream 100 bases:
>100_bases GATCGATGTCGGCTCGGGCACCGATTGCGGCGATTACACGCGCAGGAACGGGCCGGCCTTGCGTTCGAGCAGCGCGACCA ACTCGGGCTGCATGAACGCA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; Hydrolase NUDIX Family Domain-Containing Protein; NUDIX Family Hydrolase; NTP Pyrophosphohydrolase; Hydrolaso; MutT/NUDIX Family Hydrolase
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSTGPDTLAVIKERATIVCRQRSSVLLVARTAARWSLPGGTIRRGETPLQAAQRELAEETRLEGLALDYAVQFGGLTKLH HVFVADVPAHLTPRASNEIARCKWFTVDRLDTLQASVPTRKIIELLRLDCFSAFASGPLR
Sequences:
>Translated_140_residues MSTGPDTLAVIKERATIVCRQRSSVLLVARTAARWSLPGGTIRRGETPLQAAQRELAEETRLEGLALDYAVQFGGLTKLH HVFVADVPAHLTPRASNEIARCKWFTVDRLDTLQASVPTRKIIELLRLDCFSAFASGPLR >Mature_139_residues STGPDTLAVIKERATIVCRQRSSVLLVARTAARWSLPGGTIRRGETPLQAAQRELAEETRLEGLALDYAVQFGGLTKLHH VFVADVPAHLTPRASNEIARCKWFTVDRLDTLQASVPTRKIIELLRLDCFSAFASGPLR
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15437; Mature: 15306
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGPDTLAVIKERATIVCRQRSSVLLVARTAARWSLPGGTIRRGETPLQAAQRELAEET CCCCCHHHHHHHHHHHEEEECCCCEEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHH RLEGLALDYAVQFGGLTKLHHVFVADVPAHLTPRASNEIARCKWFTVDRLDTLQASVPTR HHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCHH KIIELLRLDCFSAFASGPLR HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STGPDTLAVIKERATIVCRQRSSVLLVARTAARWSLPGGTIRRGETPLQAAQRELAEET CCCCHHHHHHHHHHHEEEECCCCEEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHH RLEGLALDYAVQFGGLTKLHHVFVADVPAHLTPRASNEIARCKWFTVDRLDTLQASVPTR HHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCHH KIIELLRLDCFSAFASGPLR HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA