Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is fiu [H]

Identifier: 116689677

GI number: 116689677

Start: 1837157

End: 1839127

Strand: Reverse

Name: fiu [H]

Synonym: Bcen2424_1655

Alternate gene names: 116689677

Gene position: 1839127-1837157 (Counterclockwise)

Preceding gene: 116689686

Following gene: 116689676

Centisome position: 52.79

GC content: 67.99

Gene sequence:

>1971_bases
GTGAGTACGGCGACGCGCACCGCGAGCGATCCGCGCGACGTACCGCAAACCATCGACAGCGTCCCGGTAGAGGAAACGCT
GTCCTATGGCGGTCGCACGCTGGCCGACGCGCTGGCCGGCGTGCCCGGTGTGTCCAATACGTCGGACACGCGCTTCGATT
CGTTCCGCATTCGCGGCTTTTCCGCCGCGGGCGACCTGCTGCTCGACGGCATGCGCGACGATGCGCAATACGTGCGCAGT
CTCAGCAACATCGAACGCGTCGAAGTGCTGAAGGGGCCGGCAGCGGCGCTGTACGGGCGCGGCAGCGGCGGCGGCGTCAT
CAACCGGATCACCAAGCAGCCGTTGCCGGAAAACTTCGGGCATCTGTCGGCGGCGACCGGCAGCTATGGACGGCTCGGCG
CGTCGGTCGATCTCAACCGGATGCTGTCGAGCGCATGGAGCGTGCGGCTCAATGCCGGACGCGAACACGCAGGCAGCTTC
CGCGACCACGTCGACAGCACGCGTCAGTACGTCGCACCGTCGATCAAATGGCACGACGCGCGGCGCAGCTGGCTGCTGCA
GTTCGAATACGACGCGTACCGGCGCGTGCCCGATCGCGGCATGCCGGCGCCGGTCGCCGCGCTCGACGCGGCCGGCAAGC
CGTTCGCGTTCTCGCTGCCGTCCGCGCCACGCGCAACCTTCTTCGGCGCGGCGGGCCGCGACACGATTCGCGACGAGAAC
ATGAACTGGCGCTCGGTCTTCACGCACGCGCTCGACGGCGACTGGGAATTGCGCCATACGCTCGGCGTGCTGAATTTGCG
CAGCACCTTCGACAATACCTACGTCACGCAAAGCTACGTCGCGAAGCCGCGCGACTACCGGCATGTGCAACGCGCACGCT
ATCTGCAGGACATGACGCATCTCAACGTCCAGACCGGCGTCGAACTGGGCGGCAAGGTCGCAACCGGTCCGGCGCTGCAT
CACCTGCTGTTCGGTATCGAATACGGCTGGCAGAAACGCGCGCCGACGCTCTGGCAGGCCGACGCGGCGCCGATTCCGGT
GACCGGGCCGGATCGTTTCGCCCTGGTCGGCTCGACGCCGCGCCCGTATGCGATGAACCGCCACCGCGTCAGCGACTACG
CGATCTTCGCGCAGGATCGCGTCGACCTCGGGCGAGCGTGGAAGCTCCTCGGCGGCCTGCGCGGGGAACGTTTCGACGTC
GATTCGACCAACGCGCTGAACGGCCTGCATGCACGGCGCACGACGGCGGCATGGAGCCCGCGGCTCGGCGTCGTGTGGTC
GCCGGTCGGCACGCACAGCCTGTATGCGTCGTACAGCAAGAACTTCGCGCCGGTCGGTGGCGACCTGATCGGCATCACGC
CCGACGCGCGCGGCAACGCCAACGACCTCGGCCCGCAATACACGCGCCAATACGAGATCGGCGTGAAAAGCGACTGGCGC
GACGGCGCGCTGAGCACGACGCTCGCGCTGTTTCAGCTCGACCTGTACAACCGCCGCATCGCCGATCCGGTTCGGCCGGG
CTTTTTCGACCTCACCGGCCTCGAGCGCAATCGCGGCCTGGAACTGGGCGTCGCCGGCCGGCTCGCGGGCGACTGGTTCG
TCCGCGGCGGCATCGGCTGGCAACACGCGCGGGTGGTCGACGCCGAGCCGAAGTACGCGGGCAAGCGCTCGGCGGGCGTG
TCGGCGTCGAACGGCAGCCTGTTCGTCGGCCATGCGCCGCTACGCGGTTTTTTCGCGGAACTCGGGCTGGTGTACGAAGG
CGCGCGTTACGCCGATCGCGACAACCTGCTCGAATTGCCCGCGTACGTTCGCTGGGACGGCAAGGCCGGCTATCGCACGC
GCGACTTCGAGGTGACGCTGGCGGCCGTCAACCTGACCGATCGCGATTACTACGCGAATGCGACGGGCCTCGCGCAGATC
ATGCCCGGTACGCCACGCACGTTCACGCTGACGGCGGCATACAAGTTCTGA

Upstream 100 bases:

>100_bases
CGTTGCTTCCTCCCCTGCTCCAGCAGCCGAGTTCGACGACGAACTGCCTGCGGTCGAAGTACGCAGCCGTCGTCATCCAA
ACGATCCGCGCGCCGAAAGC

Downstream 100 bases:

>100_bases
CCTCGCGGGTAGCGCCGACACCCGCGCAGCCGGCCCGCCGGGCGGCTTGCGGGTTGCACGCCTGTGCTATCGTATGCGCC
GCGTTCGGTGCTCGCATGCG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Ferric iron uptake protein; TonB-dependent receptor fiu [H]

Number of amino acids: Translated: 656; Mature: 655

Protein sequence:

>656_residues
MSTATRTASDPRDVPQTIDSVPVEETLSYGGRTLADALAGVPGVSNTSDTRFDSFRIRGFSAAGDLLLDGMRDDAQYVRS
LSNIERVEVLKGPAAALYGRGSGGGVINRITKQPLPENFGHLSAATGSYGRLGASVDLNRMLSSAWSVRLNAGREHAGSF
RDHVDSTRQYVAPSIKWHDARRSWLLQFEYDAYRRVPDRGMPAPVAALDAAGKPFAFSLPSAPRATFFGAAGRDTIRDEN
MNWRSVFTHALDGDWELRHTLGVLNLRSTFDNTYVTQSYVAKPRDYRHVQRARYLQDMTHLNVQTGVELGGKVATGPALH
HLLFGIEYGWQKRAPTLWQADAAPIPVTGPDRFALVGSTPRPYAMNRHRVSDYAIFAQDRVDLGRAWKLLGGLRGERFDV
DSTNALNGLHARRTTAAWSPRLGVVWSPVGTHSLYASYSKNFAPVGGDLIGITPDARGNANDLGPQYTRQYEIGVKSDWR
DGALSTTLALFQLDLYNRRIADPVRPGFFDLTGLERNRGLELGVAGRLAGDWFVRGGIGWQHARVVDAEPKYAGKRSAGV
SASNGSLFVGHAPLRGFFAELGLVYEGARYADRDNLLELPAYVRWDGKAGYRTRDFEVTLAAVNLTDRDYYANATGLAQI
MPGTPRTFTLTAAYKF

Sequences:

>Translated_656_residues
MSTATRTASDPRDVPQTIDSVPVEETLSYGGRTLADALAGVPGVSNTSDTRFDSFRIRGFSAAGDLLLDGMRDDAQYVRS
LSNIERVEVLKGPAAALYGRGSGGGVINRITKQPLPENFGHLSAATGSYGRLGASVDLNRMLSSAWSVRLNAGREHAGSF
RDHVDSTRQYVAPSIKWHDARRSWLLQFEYDAYRRVPDRGMPAPVAALDAAGKPFAFSLPSAPRATFFGAAGRDTIRDEN
MNWRSVFTHALDGDWELRHTLGVLNLRSTFDNTYVTQSYVAKPRDYRHVQRARYLQDMTHLNVQTGVELGGKVATGPALH
HLLFGIEYGWQKRAPTLWQADAAPIPVTGPDRFALVGSTPRPYAMNRHRVSDYAIFAQDRVDLGRAWKLLGGLRGERFDV
DSTNALNGLHARRTTAAWSPRLGVVWSPVGTHSLYASYSKNFAPVGGDLIGITPDARGNANDLGPQYTRQYEIGVKSDWR
DGALSTTLALFQLDLYNRRIADPVRPGFFDLTGLERNRGLELGVAGRLAGDWFVRGGIGWQHARVVDAEPKYAGKRSAGV
SASNGSLFVGHAPLRGFFAELGLVYEGARYADRDNLLELPAYVRWDGKAGYRTRDFEVTLAAVNLTDRDYYANATGLAQI
MPGTPRTFTLTAAYKF
>Mature_655_residues
STATRTASDPRDVPQTIDSVPVEETLSYGGRTLADALAGVPGVSNTSDTRFDSFRIRGFSAAGDLLLDGMRDDAQYVRSL
SNIERVEVLKGPAAALYGRGSGGGVINRITKQPLPENFGHLSAATGSYGRLGASVDLNRMLSSAWSVRLNAGREHAGSFR
DHVDSTRQYVAPSIKWHDARRSWLLQFEYDAYRRVPDRGMPAPVAALDAAGKPFAFSLPSAPRATFFGAAGRDTIRDENM
NWRSVFTHALDGDWELRHTLGVLNLRSTFDNTYVTQSYVAKPRDYRHVQRARYLQDMTHLNVQTGVELGGKVATGPALHH
LLFGIEYGWQKRAPTLWQADAAPIPVTGPDRFALVGSTPRPYAMNRHRVSDYAIFAQDRVDLGRAWKLLGGLRGERFDVD
STNALNGLHARRTTAAWSPRLGVVWSPVGTHSLYASYSKNFAPVGGDLIGITPDARGNANDLGPQYTRQYEIGVKSDWRD
GALSTTLALFQLDLYNRRIADPVRPGFFDLTGLERNRGLELGVAGRLAGDWFVRGGIGWQHARVVDAEPKYAGKRSAGVS
ASNGSLFVGHAPLRGFFAELGLVYEGARYADRDNLLELPAYVRWDGKAGYRTRDFEVTLAAVNLTDRDYYANATGLAQIM
PGTPRTFTLTAAYKF

Specific function: Involved in the active transport across the outer membrane of iron complexed with catecholate siderophores such as dihydroxybenzoylserine and dihydroxybenzoate. It derives its energy for transport by interacting with the trans-periplasmic membrane protein

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=730, Percent_Identity=25.6164383561644, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1786344, Length=714, Percent_Identity=26.3305322128852, Blast_Score=155, Evalue=7e-39,
Organism=Escherichia coli, GI1790743, Length=304, Percent_Identity=24.0131578947368, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 72082; Mature: 71950

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTATRTASDPRDVPQTIDSVPVEETLSYGGRTLADALAGVPGVSNTSDTRFDSFRIRGF
CCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEE
SAAGDLLLDGMRDDAQYVRSLSNIERVEVLKGPAAALYGRGSGGGVINRITKQPLPENFG
CCCCHHHHCCCCHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCCCCC
HLSAATGSYGRLGASVDLNRMLSSAWSVRLNAGREHAGSFRDHVDSTRQYVAPSIKWHDA
CEEECCCCCCCCCCCCCHHHHHHHHHEEEEECCCHHCCHHHHHHHHHHHHHCCCCEEECC
RRSWLLQFEYDAYRRVPDRGMPAPVAALDAAGKPFAFSLPSAPRATFFGAAGRDTIRDEN
CCEEEEEEECHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCEEECCCCCCCCCCCC
MNWRSVFTHALDGDWELRHTLGVLNLRSTFDNTYVTQSYVAKPRDYRHVQRARYLQDMTH
CCHHHHHHHHCCCCEEEHHHHHHEEHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHH
LNVQTGVELGGKVATGPALHHLLFGIEYGWQKRAPTLWQADAAPIPVTGPDRFALVGSTP
CCHHHCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCC
RPYAMNRHRVSDYAIFAQDRVDLGRAWKLLGGLRGERFDVDSTNALNGLHARRTTAAWSP
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHCCCCCCCC
RLGVVWSPVGTHSLYASYSKNFAPVGGDLIGITPDARGNANDLGPQYTRQYEIGVKSDWR
CCCEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCC
DGALSTTLALFQLDLYNRRIADPVRPGFFDLTGLERNRGLELGVAGRLAGDWFVRGGIGW
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCEECCCEEEECCCCC
QHARVVDAEPKYAGKRSAGVSASNGSLFVGHAPLRGFFAELGLVYEGARYADRDNLLELP
CEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEECC
AYVRWDGKAGYRTRDFEVTLAAVNLTDRDYYANATGLAQIMPGTPRTFTLTAAYKF
CEEEECCCCCCEEECEEEEEEEEEECCCCCCCCCCCHHEECCCCCCEEEEEEEECC
>Mature Secondary Structure 
STATRTASDPRDVPQTIDSVPVEETLSYGGRTLADALAGVPGVSNTSDTRFDSFRIRGF
CCCCCCCCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEE
SAAGDLLLDGMRDDAQYVRSLSNIERVEVLKGPAAALYGRGSGGGVINRITKQPLPENFG
CCCCHHHHCCCCHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCCCCC
HLSAATGSYGRLGASVDLNRMLSSAWSVRLNAGREHAGSFRDHVDSTRQYVAPSIKWHDA
CEEECCCCCCCCCCCCCHHHHHHHHHEEEEECCCHHCCHHHHHHHHHHHHHCCCCEEECC
RRSWLLQFEYDAYRRVPDRGMPAPVAALDAAGKPFAFSLPSAPRATFFGAAGRDTIRDEN
CCEEEEEEECHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCEEECCCCCCCCCCCC
MNWRSVFTHALDGDWELRHTLGVLNLRSTFDNTYVTQSYVAKPRDYRHVQRARYLQDMTH
CCHHHHHHHHCCCCEEEHHHHHHEEHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHH
LNVQTGVELGGKVATGPALHHLLFGIEYGWQKRAPTLWQADAAPIPVTGPDRFALVGSTP
CCHHHCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCC
RPYAMNRHRVSDYAIFAQDRVDLGRAWKLLGGLRGERFDVDSTNALNGLHARRTTAAWSP
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHCCCCCCCC
RLGVVWSPVGTHSLYASYSKNFAPVGGDLIGITPDARGNANDLGPQYTRQYEIGVKSDWR
CCCEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCC
DGALSTTLALFQLDLYNRRIADPVRPGFFDLTGLERNRGLELGVAGRLAGDWFVRGGIGW
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCEECCCEEEECCCCC
QHARVVDAEPKYAGKRSAGVSASNGSLFVGHAPLRGFFAELGLVYEGARYADRDNLLELP
CEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEECC
AYVRWDGKAGYRTRDFEVTLAAVNLTDRDYYANATGLAQIMPGTPRTFTLTAAYKF
CEEEECCCCCCEEECEEEEEEEEEECCCCCCCCCCCHHEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]