Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is iucB [H]
Identifier: 116689668
GI number: 116689668
Start: 1828540
End: 1829556
Strand: Direct
Name: iucB [H]
Synonym: Bcen2424_1646
Alternate gene names: 116689668
Gene position: 1828540-1829556 (Clockwise)
Preceding gene: 116689667
Following gene: 116689671
Centisome position: 52.49
GC content: 68.63
Gene sequence:
>1017_bases ATGCAAGACACGCTGACGAAACCGGCCGGCGCCGCCGACGCTGTCGAAGGTGAAGTGGCCGCGGCGCTCGATGGCGCCGC GCAGGGGCAGGCGGCGGCCGTCGTCGAGCATGCGCTCGATGCATGGCGGCCCGACGACGCACCGGACGCGCTGCTCGCGA CGTTCGTCGCGCTGTTCAACACCGACACGCGGCATGACGCGGCGACGATCTCGGTGCCGCGCGGCGGCGCCGATGCGGCG GCCGTGGCCTCGTACGTCGCGCGTGCGGTGCGTGAAGGCGTGATCGACGGCGCGCAGGTCGCGGACGACACGCTGCGGCT CACGGTGTCGCGCACGACGTTCTGGCAGAACCCGCGGCCGTGGCTGAAGGCGAGCGCATCGGGCGGGATGCCGCTGCGCT ACGCGATCACGAACGGCCATCGGCATCCGGTACGGCCGCCGTCGCCGGCCGGCGAGATCTATGCGCGCCCTATGCCGCAG GTCGGGATGACGTTCAGCCTGCGCACCGTCGACATCGATGCGCACGCGGACCTCTTCAGCGGCTGGATGAACCTCGACCG CGTCGCGCATTTCTGGGATCAGCGCGGCACGCGCGACGAGCACGCGGCGTATCTGGCCGAACGGCTGGCCGATCCGCACA TGCACCCGATGATCGGCTATTTCGACGACACGCCGTTCGGCTATTTCGAGTTCTACTGGGCGAAGGAGGATCGCCTCGCG CCGTTCTACGACGCGCACGACTACGATCGCGGGCTGCACCTGCTGATCGGCGACTCGCGGTTCCAGAGCGCCGGCAAGCT GCATGCGTGGTGGAGCGGGGTGCTGCACTACATGTTCGTCGACGAACCGCGCACGCAGCGGCTCGTCGGCGAGCCGCGCG TCGATCACGTGCGGCACATCGCGTACATGCACCGGCTCGGGTTCTACACGCTGAAGGAATTCGATTTCCCGCACAAGCGC GCGGCGCTCACGGTGATCGAGCGCGATACGTTCTTTGACACTTTCCGGTTGCCGTGA
Upstream 100 bases:
>100_bases TTCTCGAACTGCGCTGGAACAATTTCCAGCGCAGCCTGTTTCCGGCACTCGAGCGTGGGCTGCACGTCCTCGCCGACCGC CACGACGCGGGAGCATTGTG
Downstream 100 bases:
>100_bases CGGGGGTGGGGGTGCGCGGCGTCGGTGCGTCCGACGTGGTTGTCCTTTGCAAACGAGCCGCTCGCCGATTCCAGCTTCCT CGTCGAGCCGACCCGGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFNTDTRHDAATISVPRGGADAA AVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRPWLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQ VGMTFSLRTVDIDAHADLFSGWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR AALTVIERDTFFDTFRLP
Sequences:
>Translated_338_residues MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFNTDTRHDAATISVPRGGADAA AVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRPWLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQ VGMTFSLRTVDIDAHADLFSGWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR AALTVIERDTFFDTFRLP >Mature_338_residues MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFNTDTRHDAATISVPRGGADAA AVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRPWLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQ VGMTFSLRTVDIDAHADLFSGWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR AALTVIERDTFFDTFRLP
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR019432 [H]
Pfam domain/function: PF10331 AlcB [H]
EC number: NA
Molecular weight: Translated: 37844; Mature: 37844
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFN CCCCCCCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC TDTRHDAATISVPRGGADAAAVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRP CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCCC WLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQVGMTFSLRTVDIDAHADLFS CEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCHHHHHH GWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCC PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHI CCCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHH AYMHRLGFYTLKEFDFPHKRAALTVIERDTFFDTFRLP HHHHHHCCHHHHHCCCCCHHHEEEEEECCCCCHHCCCC >Mature Secondary Structure MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFN CCCCCCCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC TDTRHDAATISVPRGGADAAAVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRP CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCCC WLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQVGMTFSLRTVDIDAHADLFS CEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCHHHHHH GWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCC PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHI CCCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHH AYMHRLGFYTLKEFDFPHKRAALTVIERDTFFDTFRLP HHHHHHCCHHHHHCCCCCHHHEEEEEECCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8003107 [H]