Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is iucB [H]

Identifier: 116689668

GI number: 116689668

Start: 1828540

End: 1829556

Strand: Direct

Name: iucB [H]

Synonym: Bcen2424_1646

Alternate gene names: 116689668

Gene position: 1828540-1829556 (Clockwise)

Preceding gene: 116689667

Following gene: 116689671

Centisome position: 52.49

GC content: 68.63

Gene sequence:

>1017_bases
ATGCAAGACACGCTGACGAAACCGGCCGGCGCCGCCGACGCTGTCGAAGGTGAAGTGGCCGCGGCGCTCGATGGCGCCGC
GCAGGGGCAGGCGGCGGCCGTCGTCGAGCATGCGCTCGATGCATGGCGGCCCGACGACGCACCGGACGCGCTGCTCGCGA
CGTTCGTCGCGCTGTTCAACACCGACACGCGGCATGACGCGGCGACGATCTCGGTGCCGCGCGGCGGCGCCGATGCGGCG
GCCGTGGCCTCGTACGTCGCGCGTGCGGTGCGTGAAGGCGTGATCGACGGCGCGCAGGTCGCGGACGACACGCTGCGGCT
CACGGTGTCGCGCACGACGTTCTGGCAGAACCCGCGGCCGTGGCTGAAGGCGAGCGCATCGGGCGGGATGCCGCTGCGCT
ACGCGATCACGAACGGCCATCGGCATCCGGTACGGCCGCCGTCGCCGGCCGGCGAGATCTATGCGCGCCCTATGCCGCAG
GTCGGGATGACGTTCAGCCTGCGCACCGTCGACATCGATGCGCACGCGGACCTCTTCAGCGGCTGGATGAACCTCGACCG
CGTCGCGCATTTCTGGGATCAGCGCGGCACGCGCGACGAGCACGCGGCGTATCTGGCCGAACGGCTGGCCGATCCGCACA
TGCACCCGATGATCGGCTATTTCGACGACACGCCGTTCGGCTATTTCGAGTTCTACTGGGCGAAGGAGGATCGCCTCGCG
CCGTTCTACGACGCGCACGACTACGATCGCGGGCTGCACCTGCTGATCGGCGACTCGCGGTTCCAGAGCGCCGGCAAGCT
GCATGCGTGGTGGAGCGGGGTGCTGCACTACATGTTCGTCGACGAACCGCGCACGCAGCGGCTCGTCGGCGAGCCGCGCG
TCGATCACGTGCGGCACATCGCGTACATGCACCGGCTCGGGTTCTACACGCTGAAGGAATTCGATTTCCCGCACAAGCGC
GCGGCGCTCACGGTGATCGAGCGCGATACGTTCTTTGACACTTTCCGGTTGCCGTGA

Upstream 100 bases:

>100_bases
TTCTCGAACTGCGCTGGAACAATTTCCAGCGCAGCCTGTTTCCGGCACTCGAGCGTGGGCTGCACGTCCTCGCCGACCGC
CACGACGCGGGAGCATTGTG

Downstream 100 bases:

>100_bases
CGGGGGTGGGGGTGCGCGGCGTCGGTGCGTCCGACGTGGTTGTCCTTTGCAAACGAGCCGCTCGCCGATTCCAGCTTCCT
CGTCGAGCCGACCCGGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFNTDTRHDAATISVPRGGADAA
AVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRPWLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQ
VGMTFSLRTVDIDAHADLFSGWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR
AALTVIERDTFFDTFRLP

Sequences:

>Translated_338_residues
MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFNTDTRHDAATISVPRGGADAA
AVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRPWLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQ
VGMTFSLRTVDIDAHADLFSGWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR
AALTVIERDTFFDTFRLP
>Mature_338_residues
MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFNTDTRHDAATISVPRGGADAA
AVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRPWLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQ
VGMTFSLRTVDIDAHADLFSGWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR
AALTVIERDTFFDTFRLP

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iucB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR019432 [H]

Pfam domain/function: PF10331 AlcB [H]

EC number: NA

Molecular weight: Translated: 37844; Mature: 37844

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFN
CCCCCCCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
TDTRHDAATISVPRGGADAAAVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRP
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCCC
WLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQVGMTFSLRTVDIDAHADLFS
CEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCHHHHHH
GWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCC
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHI
CCCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHH
AYMHRLGFYTLKEFDFPHKRAALTVIERDTFFDTFRLP
HHHHHHCCHHHHHCCCCCHHHEEEEEECCCCCHHCCCC
>Mature Secondary Structure
MQDTLTKPAGAADAVEGEVAAALDGAAQGQAAAVVEHALDAWRPDDAPDALLATFVALFN
CCCCCCCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
TDTRHDAATISVPRGGADAAAVASYVARAVREGVIDGAQVADDTLRLTVSRTTFWQNPRP
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCCC
WLKASASGGMPLRYAITNGHRHPVRPPSPAGEIYARPMPQVGMTFSLRTVDIDAHADLFS
CEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCHHHHHH
GWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCC
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHI
CCCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHH
AYMHRLGFYTLKEFDFPHKRAALTVIERDTFFDTFRLP
HHHHHHCCHHHHHCCCCCHHHEEEEEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8003107 [H]