Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689647
Identifier: 116689647
GI number: 116689647
Start: 1792606
End: 1792965
Strand: Direct
Name: 116689647
Synonym: Bcen2424_1625
Alternate gene names: NA
Gene position: 1792606-1792965 (Clockwise)
Preceding gene: 116689646
Following gene: 116689648
Centisome position: 51.45
GC content: 61.67
Gene sequence:
>360_bases GTGTCGGGTGGCATGACGGCGGTCGCGCGCGTCGACGTGCGACCGCCGCTTCGACAGGGCATGCTGCCCGTCGTACCGCC GATCGTCATCGGCGCTTCCTTTCGCTGTTCAGCGCATCCGCTCGTCGCGTTCCCATCCAGCAGCACCGCGAAAGGGTGGC TTTCGCCGCACCCGCATCCACATCCGCAAACCGATCGTGCCGCCCGTCGGCGCAAACGTGTGCCGCACTTCTTCCGCTTT TTCATCTCGCCCGATCCGGCATGTCAGCCGCGTTCCAGAGGCCGCGCCTGCATATCTGCAATTGACGATCTAATTAATCA ATGTATTGGAATTAATGGCGGCGGCAAAATGTCGCGGTAA
Upstream 100 bases:
>100_bases GCGATCGCGCTGTATCGCGCGCTCGGCGGCGGCTGGGCGCCGGCCACGGCGGAGGCCGCGGCTTCCGCGTGACGGCCGAT GCGTCGCCCGACGCCGCGGC
Downstream 100 bases:
>100_bases AACGTTTGTATGCTTTTCGCAATCGTTTGCGCGATAAATCCGTATCGAATGAATGTCGCCGTTCATTTCCTGTCAGTTGA AAATGAATCGATATCCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSGGMTAVARVDVRPPLRQGMLPVVPPIVIGASFRCSAHPLVAFPSSSTAKGWLSPHPHPHPQTDRAARRRKRVPHFFRF FISPDPACQPRSRGRACISAIDDLINQCIGINGGGKMSR
Sequences:
>Translated_119_residues MSGGMTAVARVDVRPPLRQGMLPVVPPIVIGASFRCSAHPLVAFPSSSTAKGWLSPHPHPHPQTDRAARRRKRVPHFFRF FISPDPACQPRSRGRACISAIDDLINQCIGINGGGKMSR >Mature_118_residues SGGMTAVARVDVRPPLRQGMLPVVPPIVIGASFRCSAHPLVAFPSSSTAKGWLSPHPHPHPQTDRAARRRKRVPHFFRFF ISPDPACQPRSRGRACISAIDDLINQCIGINGGGKMSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12932; Mature: 12801
Theoretical pI: Translated: 12.12; Mature: 12.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGMTAVARVDVRPPLRQGMLPVVPPIVIGASFRCSAHPLVAFPSSSTAKGWLSPHPHP CCCCCCEEEEECCCCCHHHCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC HPQTDRAARRRKRVPHFFRFFISPDPACQPRSRGRACISAIDDLINQCIGINGGGKMSR CCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SGGMTAVARVDVRPPLRQGMLPVVPPIVIGASFRCSAHPLVAFPSSSTAKGWLSPHPHP CCCCCEEEEECCCCCHHHCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC HPQTDRAARRRKRVPHFFRFFISPDPACQPRSRGRACISAIDDLINQCIGINGGGKMSR CCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA