Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yxiE [H]

Identifier: 116689619

GI number: 116689619

Start: 1758080

End: 1758577

Strand: Direct

Name: yxiE [H]

Synonym: Bcen2424_1597

Alternate gene names: 116689619

Gene position: 1758080-1758577 (Clockwise)

Preceding gene: 116689616

Following gene: 116689623

Centisome position: 50.46

GC content: 59.84

Gene sequence:

>498_bases
ATGGCTAGCTACAACAAGATTTTGCTGTGTTACGACGGCACGCTCGAAGGGCGCAAGGCGCTGCGTTACGGGGCCAATCT
CGCAATGGACCTGAAGGCCGAAACGCATTTGCTGTCGGTCGTCGACATGCGTTCGAGCATTGCGCAAAGTGCAGGTTTGC
TGACCGATGTCGCATGCGGACGCTTCGAGGAAACCGCGCGCGAAATCCTGCAGGAAGGCGTGAATTGGCTGCGCGAGCGC
GGCGTGCAGGCCGAAGGCCATTTCGCATTCGGTTATCCGATCGACGAAATCGCGAATCTCGCGTCGGAATTGAAGGTCGA
TCTCGTCGTCGTCGGCCACCGGTGCCGCAGCGGATTGTCGAGATGGTGGATGGGGTCGGGCAATACGCAACTGCTCGATC
GCGTGAACTGCAGCATCCTGGTTGCGTGTTCGTCGGCGGAAGAGCAGAAGGCCGAAATTGCGCGCGAGCGTGAAGCGGCC
ATCGCGAACGGCCAATGA

Upstream 100 bases:

>100_bases
CGCGCCGTGCGGGGCGAATCAGCGTTTTCCATCCCTTGCGTCTTGAATTGCGGCGCACCATGATGAATGCGTAGGCTCGT
TGTCGCGATAGGGAGGCTTC

Downstream 100 bases:

>100_bases
TCTAAAAGCTGGGGGACCCCCTGACCACCCGACCGGCAATGCGTGACGGTCAGGCATCGCACTGCATCGGCAGTGCGCAC
GTCGAGCACGGCCTGCTATG

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP YxiE [H]

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MASYNKILLCYDGTLEGRKALRYGANLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACGRFEETAREILQEGVNWLRER
GVQAEGHFAFGYPIDEIANLASELKVDLVVVGHRCRSGLSRWWMGSGNTQLLDRVNCSILVACSSAEEQKAEIAREREAA
IANGQ

Sequences:

>Translated_165_residues
MASYNKILLCYDGTLEGRKALRYGANLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACGRFEETAREILQEGVNWLRER
GVQAEGHFAFGYPIDEIANLASELKVDLVVVGHRCRSGLSRWWMGSGNTQLLDRVNCSILVACSSAEEQKAEIAREREAA
IANGQ
>Mature_164_residues
ASYNKILLCYDGTLEGRKALRYGANLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACGRFEETAREILQEGVNWLRERG
VQAEGHFAFGYPIDEIANLASELKVDLVVVGHRCRSGLSRWWMGSGNTQLLDRVNCSILVACSSAEEQKAEIAREREAAI
ANGQ

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 18118; Mature: 17987

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYNKILLCYDGTLEGRKALRYGANLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACG
CCCCCEEEEEECCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHC
RFEETAREILQEGVNWLRERGVQAEGHFAFGYPIDEIANLASELKVDLVVVGHRCRSGLS
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHEEECHHHHHHHH
RWWMGSGNTQLLDRVNCSILVACSSAEEQKAEIAREREAAIANGQ
HHCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASYNKILLCYDGTLEGRKALRYGANLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACG
CCCCEEEEEECCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHC
RFEETAREILQEGVNWLRERGVQAEGHFAFGYPIDEIANLASELKVDLVVVGHRCRSGLS
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHEEECHHHHHHHH
RWWMGSGNTQLLDRVNCSILVACSSAEEQKAEIAREREAAIANGQ
HHCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377 [H]