Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689616
Identifier: 116689616
GI number: 116689616
Start: 1755527
End: 1755949
Strand: Direct
Name: 116689616
Synonym: Bcen2424_1594
Alternate gene names: NA
Gene position: 1755527-1755949 (Clockwise)
Preceding gene: 116689615
Following gene: 116689619
Centisome position: 50.39
GC content: 63.36
Gene sequence:
>423_bases ATGACCCAACCGAAGATTCATCCTCGACTCGAAAAGGCGCTGACGCGCGGCGATCTCGCGATCCGCCAGGCCAATTCCGC GCGGGCGACTGCCGTGCTGCAAGCACTCGGCACGATGATCATCGAGGCCTCCGCAACGATCGGTGTCGAGGCCAGCATCG ACATTCCGCAAGGCGATCGCATTTACGATCCGGTCAACGGACTGTGGCCGCAGAAGATGCTGGTGTCGTTCGACGGCCCG GTGGACGAAGCCGACAAGGAAGAACTGCGCACGGTCTATCTGGTGGCCGACGATCCGGGCACGCAGTTCCGTGTGGAATG GCATCGCGCGGACGGCAAGCTCGGCCGCCAGGAAGGCGGTCCGCTCGCGACCGTGGCGTTCCTGACCGACGTTGAAATTC CGTGGAGCGACGACGACGAGTAA
Upstream 100 bases:
>100_bases GGGCGACACGCCGGCCCGGCGCAATCGTCGCATTCGTATTCATCCGGCGCCACCGCTTCACGTGTGCGGCGCCCTTTACA AGAAGCAAACAGGAAAACGC
Downstream 100 bases:
>100_bases CGTCGTCGCATGAAGCCGGCGCCCGGTGTCCGGCGCGCCGGCCGTCAGCGCATCATCCGCCGCCGGAACAGCCACGCGGA CAGCAGGAATCCGCCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTQPKIHPRLEKALTRGDLAIRQANSARATAVLQALGTMIIEASATIGVEASIDIPQGDRIYDPVNGLWPQKMLVSFDGP VDEADKEELRTVYLVADDPGTQFRVEWHRADGKLGRQEGGPLATVAFLTDVEIPWSDDDE
Sequences:
>Translated_140_residues MTQPKIHPRLEKALTRGDLAIRQANSARATAVLQALGTMIIEASATIGVEASIDIPQGDRIYDPVNGLWPQKMLVSFDGP VDEADKEELRTVYLVADDPGTQFRVEWHRADGKLGRQEGGPLATVAFLTDVEIPWSDDDE >Mature_139_residues TQPKIHPRLEKALTRGDLAIRQANSARATAVLQALGTMIIEASATIGVEASIDIPQGDRIYDPVNGLWPQKMLVSFDGPV DEADKEELRTVYLVADDPGTQFRVEWHRADGKLGRQEGGPLATVAFLTDVEIPWSDDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15367; Mature: 15236
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPKIHPRLEKALTRGDLAIRQANSARATAVLQALGTMIIEASATIGVEASIDIPQGDR CCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCC IYDPVNGLWPQKMLVSFDGPVDEADKEELRTVYLVADDPGTQFRVEWHRADGKLGRQEGG EECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCC PLATVAFLTDVEIPWSDDDE CEEEEEEEEECCCCCCCCCC >Mature Secondary Structure TQPKIHPRLEKALTRGDLAIRQANSARATAVLQALGTMIIEASATIGVEASIDIPQGDR CCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCC IYDPVNGLWPQKMLVSFDGPVDEADKEELRTVYLVADDPGTQFRVEWHRADGKLGRQEGG EECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCC PLATVAFLTDVEIPWSDDDE CEEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA