Click here to switch to the map view.

The map label for this gene is ssuC [H]

Identifier: 116689585

GI number: 116689585

Start: 1728237

End: 1729049

Strand: Direct

Name: ssuC [H]

Synonym: Bcen2424_1563

Alternate gene names: 116689585

Gene position: 1728237-1729049 (Clockwise)

Preceding gene: 116689584

Following gene: 116689586

Centisome position: 49.61

GC content: 66.91

Gene sequence:

>813_bases
ATGACAACGAAAACGTCGACGACGGGCGTCGCCGTGGCCGCCCGCGCGTGGCGCGGCGTCGCGCCGTGGCTCGTGCCGCT
CGCGTTGCTGGTGGTGTGGGAGGTCGGTGCGCGCACCGGCTGGCTGTCGACCCGCGTGCTGCCCGAGCCGGTGGCCGTCG
TGCGCGCCGCCTGGTCGCTCGTGACGTCGGGCGAAATGTGGGCGAACGTGAAAGTGAGCACGTGGCGCGCGCTGTTCGGC
TTCGCGATCGGCGGTGGCGTGGGCCTTGCGCTGGGGCTTGCGACCGGGCTGTCGAAGGCCGCCGAGGTCGCGCTCGACTC
GACGATCCAGATGATCCGCAACATCCCGGCGCTCGCGATGATCCCGCTCGTGATCCTGTGGTTCGGCATCGACGAGAAGG
CGAAGCTGTTCCTCGTCGCGCTCGGCGTGTTCTTTCCCGTCTACATCAACACGTATCACGGGATCCGCTCGGTCGACGCG
AACCTGATCGAGATGGCGAAGAGCTACGGCGTGCGCGGCTTCGCGCTGTACCGCGACGTGATCCTGCCCGGCGCATTGCC
GTCGATCCTCGTCGGCGTGCGTTTCGCGCTCGGCCTGATGTGGGTGATGCTGATCGTCGCGGAAACGATCTCCGCGCAGT
CGGGCATCGGCTACATGACGATGAACGCGCGTGAATTCCTGCAAACCGACGTGGTGGTGGTCGGCATCCTGCTGTACGCG
GTGCTCGGCAAGCTGGCCGATGTGCTGGCGAAATGGATCGAGCGCGTGACGCTGCGCTGGCACCCCGCCTATCAATCAGG
AGCAAAGGCATGA

Upstream 100 bases:

>100_bases
GTCAAGAAGGCGGCTGGTCCGCTGTCGGGGCCGTTCGGCGAGATCGTCGGCAACAACTATCTGCCGAAGACGAGCCAGAG
CTGAGCGACGGAGGCTTGCG

Downstream 100 bases:

>100_bases
ATGCGACGACTTCGGCGGCCGCCTACGGCCCGCTCGCCGGCGCAGACCTCGAGGCCGAACTGGCGCAGGCCCGCGTCGCG
GACAGCGATGCGCGTGACGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTTKTSTTGVAVAARAWRGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRALFG
FAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRSVDA
NLIEMAKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGILLYA
VLGKLADVLAKWIERVTLRWHPAYQSGAKA

Sequences:

>Translated_270_residues
MTTKTSTTGVAVAARAWRGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRALFG
FAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRSVDA
NLIEMAKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGILLYA
VLGKLADVLAKWIERVTLRWHPAYQSGAKA
>Mature_269_residues
TTKTSTTGVAVAARAWRGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSLVTSGEMWANVKVSTWRALFGF
AIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRSVDAN
LIEMAKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGILLYAV
LGKLADVLAKWIERVTLRWHPAYQSGAKA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=246, Percent_Identity=66.260162601626, Blast_Score=314, Evalue=4e-87,
Organism=Escherichia coli, GI1786564, Length=242, Percent_Identity=35.1239669421488, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29112; Mature: 28981

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKTSTTGVAVAARAWRGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSL
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
VTSGEMWANVKVSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAM
HCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHH
ILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGILLYA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHH
VLGKLADVLAKWIERVTLRWHPAYQSGAKA
HHHHHHHHHHHHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure 
TTKTSTTGVAVAARAWRGVAPWLVPLALLVVWEVGARTGWLSTRVLPEPVAVVRAAWSL
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
VTSGEMWANVKVSTWRALFGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAM
HCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRSVDANLIEMAKSYGVRGFALYRDV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHH
ILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGILLYA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHH
VLGKLADVLAKWIERVTLRWHPAYQSGAKA
HHHHHHHHHHHHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]