Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689560
Identifier: 116689560
GI number: 116689560
Start: 1700455
End: 1701081
Strand: Direct
Name: 116689560
Synonym: Bcen2424_1538
Alternate gene names: NA
Gene position: 1700455-1701081 (Clockwise)
Preceding gene: 116689559
Following gene: 116689561
Centisome position: 48.81
GC content: 65.71
Gene sequence:
>627_bases ATGGCACTCGGCAACGACGTTCATCTCATTCCCGTCAGGCTCGACGCGCTGCGTCCGACCCAGATGACGGTGGGCTACCG CGAAGTCAAGGCGAAGCGCAAGCACTGGAAGGCGCTGAACAAGCGCGCCCGCAAGGCCGCGATCGAATCGCACTGGTTCC CGGCCGTGCTCGGCCCGGACGGACTGCACTACATCACCGATCATCACCATCTCGGCCTCGCGCTGATCGAGGAGGGCGAG GCGCGCGTGAACGCGATGCTGCTGAAGGATCTGTCGTGGCTCGACGACACGATCTTCTGGCGGATGATGGAACACAACCA GTGGGTGCATCCGTTCGGCCCGGACGGCTCGCGGCGCGACTATGCGCATTTGCCGAAGGTGCTGACGGGGCTCGAGGACG ATCCGTACCGCAGCCTCGCCGGCGAACTGCGCACGGCGGGCGGCTACGCGAAGGACGCGACGCCGTTCAGCGAATTCCTG TGGGCCGACTATCTGCGCCAGCACGTGTCGCTCGACCAGATCCGCAAGAACTTCGCGAAGGCGCTCGATATCGCGCTGCA GCGCGCGCACGAGCAGGATGCGCGCTATCTGCCCGGCTGGTCGGGCGTGATTGCCGTGAAGCCCTGA
Upstream 100 bases:
>100_bases TCGGAGATCGTCAACCGGACGCGTATCGCGGTCATGACGGATTAACGGCGCCCGGGATCAGGAGTATCGTTGCCGGAATT TTGCAACATGGGGTACGACC
Downstream 100 bases:
>100_bases CCGGCTCACGGCTCCGCCGTCTCATGACGACCGCTCCGATTCGCCCCGACGCCGGCCCGCAGCATCCCGACCATTTCGTC GCGCTCGACACGCCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ParB-Like Nuclease Superfamily
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MALGNDVHLIPVRLDALRPTQMTVGYREVKAKRKHWKALNKRARKAAIESHWFPAVLGPDGLHYITDHHHLGLALIEEGE ARVNAMLLKDLSWLDDTIFWRMMEHNQWVHPFGPDGSRRDYAHLPKVLTGLEDDPYRSLAGELRTAGGYAKDATPFSEFL WADYLRQHVSLDQIRKNFAKALDIALQRAHEQDARYLPGWSGVIAVKP
Sequences:
>Translated_208_residues MALGNDVHLIPVRLDALRPTQMTVGYREVKAKRKHWKALNKRARKAAIESHWFPAVLGPDGLHYITDHHHLGLALIEEGE ARVNAMLLKDLSWLDDTIFWRMMEHNQWVHPFGPDGSRRDYAHLPKVLTGLEDDPYRSLAGELRTAGGYAKDATPFSEFL WADYLRQHVSLDQIRKNFAKALDIALQRAHEQDARYLPGWSGVIAVKP >Mature_207_residues ALGNDVHLIPVRLDALRPTQMTVGYREVKAKRKHWKALNKRARKAAIESHWFPAVLGPDGLHYITDHHHLGLALIEEGEA RVNAMLLKDLSWLDDTIFWRMMEHNQWVHPFGPDGSRRDYAHLPKVLTGLEDDPYRSLAGELRTAGGYAKDATPFSEFLW ADYLRQHVSLDQIRKNFAKALDIALQRAHEQDARYLPGWSGVIAVKP
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23802; Mature: 23670
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGNDVHLIPVRLDALRPTQMTVGYREVKAKRKHWKALNKRARKAAIESHWFPAVLGPD CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GLHYITDHHHLGLALIEEGEARVNAMLLKDLSWLDDTIFWRMMEHNQWVHPFGPDGSRRD CCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH YAHLPKVLTGLEDDPYRSLAGELRTAGGYAKDATPFSEFLWADYLRQHVSLDQIRKNFAK HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH ALDIALQRAHEQDARYLPGWSGVIAVKP HHHHHHHHHHHHCCCCCCCCCCEEEECC >Mature Secondary Structure ALGNDVHLIPVRLDALRPTQMTVGYREVKAKRKHWKALNKRARKAAIESHWFPAVLGPD CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GLHYITDHHHLGLALIEEGEARVNAMLLKDLSWLDDTIFWRMMEHNQWVHPFGPDGSRRD CCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH YAHLPKVLTGLEDDPYRSLAGELRTAGGYAKDATPFSEFLWADYLRQHVSLDQIRKNFAK HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH ALDIALQRAHEQDARYLPGWSGVIAVKP HHHHHHHHHHHHCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA