Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689549
Identifier: 116689549
GI number: 116689549
Start: 1688806
End: 1689132
Strand: Direct
Name: 116689549
Synonym: Bcen2424_1527
Alternate gene names: NA
Gene position: 1688806-1689132 (Clockwise)
Preceding gene: 116689548
Following gene: 116689550
Centisome position: 48.47
GC content: 69.42
Gene sequence:
>327_bases ATGTTTCACCTTTCCTCAATCCGCGTGCAGGCCGTGGGCATCGCCTTCGCCTGCTCGCTCGGGGCGGGCGTCGCGCATGC GCAAGACGACACGCCGGCGTCCGAAATCGGTCATGCGACCAGCGCGCTGCTCGACGTGCAGCGCTCGAATCGCGCGGCCG CCACGCCGCAACCGATCGACGGTGCGGCCGGCACGTATGCCTATCAGCGCTATATCGACTCGTTCAAGACGCCGATTCCG CAGTGGTTCGGCACGATGTCGGCGTCGGGCGGCGGCAGCAGCGGTGGCAGCGGCGGCGGCCTGTCCGGTGGCGACCTCGC GCGCTGA
Upstream 100 bases:
>100_bases CTGCGCCCGTGCCGTCGGTGGCCAGCAGCGACAATTTCGATCTTGCCGTGCCGCTGCTGCAGCGTTTCGCGCGATAACGA CGATATTCACGGAGGCCATC
Downstream 100 bases:
>100_bases CGGAGCAAAACGGTGACTATCCGGCACAGTGGCGGCACGATCCGCCGCGCGTCACGACAGCGCGGCGCGTTCTCGGTGAT GGCGATCATCGCGACGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MFHLSSIRVQAVGIAFACSLGAGVAHAQDDTPASEIGHATSALLDVQRSNRAAATPQPIDGAAGTYAYQRYIDSFKTPIP QWFGTMSASGGGSSGGSGGGLSGGDLAR
Sequences:
>Translated_108_residues MFHLSSIRVQAVGIAFACSLGAGVAHAQDDTPASEIGHATSALLDVQRSNRAAATPQPIDGAAGTYAYQRYIDSFKTPIP QWFGTMSASGGGSSGGSGGGLSGGDLAR >Mature_108_residues MFHLSSIRVQAVGIAFACSLGAGVAHAQDDTPASEIGHATSALLDVQRSNRAAATPQPIDGAAGTYAYQRYIDSFKTPIP QWFGTMSASGGGSSGGSGGGLSGGDLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10828; Mature: 10828
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHLSSIRVQAVGIAFACSLGAGVAHAQDDTPASEIGHATSALLDVQRSNRAAATPQPID CCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC GAAGTYAYQRYIDSFKTPIPQWFGTMSASGGGSSGGSGGGLSGGDLAR CCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFHLSSIRVQAVGIAFACSLGAGVAHAQDDTPASEIGHATSALLDVQRSNRAAATPQPID CCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC GAAGTYAYQRYIDSFKTPIPQWFGTMSASGGGSSGGSGGGLSGGDLAR CCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA