Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689550

Identifier: 116689550

GI number: 116689550

Start: 1689145

End: 1690956

Strand: Direct

Name: 116689550

Synonym: Bcen2424_1528

Alternate gene names: NA

Gene position: 1689145-1690956 (Clockwise)

Preceding gene: 116689549

Following gene: 116689551

Centisome position: 48.48

GC content: 64.68

Gene sequence:

>1812_bases
GTGACTATCCGGCACAGTGGCGGCACGATCCGCCGCGCGTCACGACAGCGCGGCGCGTTCTCGGTGATGGCGATCATCGC
GACGCTGATCGCCATTACGACGCTTGGCGCCATTGGCGTCGGTAATCTCTTTTTCCAGCGTCGGGACGTGCAGCGGATTG
CCGACATGGCGGCGCTCGCGGCCGTGCAGCGGATGGACGACGCCTGTTCGCAGCCGACTGCCACCGCGACCAGCAACGCA
CAGTCGAACGGGCTCGATGCGTCGAACGGCGACACGATCACCATCGAATGTGGCCGCTGGGATACGTCGGTCAACCCGGC
ACCCAGCTACTACGCTGCCGCGACATCCGGAACCACGCAATTGAACGCGGCCAAGGTGGTCGTCACGCGGCAAGTGCCGT
TCTTCTTCGTCGGACCGCCGCAGACGGTATCCGCGGTGTCGACCGCGCGGTCGACCAACATCGATACGTTCTCGGTCGGC
GCGACCCTGGCCGCGCTCGGCGGAGTGGGTTGCTCAGGCGGATCGGCGCCGACGTCCGGCAATCCGGGGCTCGTCAACGG
GCTGATCGGTGCGCTGCTCGGCGCCAACCTGAACCTGAACATCGCATCGTATCAAGCGCTTGCGTGCACGAACGTGACGG
TCGGCGACCTCGTTGTGGCGGCGGGCGTCGGGACGGTCGATCAACTGCTCGCGCTGAAACTCACGTTGCCGCAACTGCTC
CAGTTGATGGTGAAGGCGGCCACGCAGACGTCCGTCGTCAACGCAAGCCTGCAGGCGAGCCTCGCTACGCTGCAGGCGAT
CGTGAACGCCAACGTTCCGGGGACGTCGATCGGCCTCGGCGGCGCGGGCGGCTTGCTGAACGTCGCGCTCGCGGATACGC
AGGCGGCGCTCAACGCACAGGTGGATTTGCTCGACCTGCTGATGGTCGGCGCGGAGATCGCGGCAACGGGCAAGCCGGCG
GTCGTGGTCAACGTGCCGTCGCTGAATCTCGGCGGGCTGACGGGAACGCAGTTGCAGGTGCAGATCATCAGCCCGCCGTC
GATCGGCATCGGCGAGGGCGGGATCGATCCGGCGACGGGAACGTGGCGGACAACGGCGTCGACGGCGGCGGTGGGCGTGT
ATCTGAATGTCGAGCTTGGTACGACACAGTTGCCCATCGTCGGGGCGTTGCTTGGCGCGCTCAACGTCGGCGTCGACGTC
AACCTGCCGATCTACCTACAGGCTGGTACCGGCACGGCGCGGCTGGACTCGACGCAATGCACGTCGACACAGGCAACCAG
CACTGTCGTCATCACTGCGCGACCCGGTGTAGCCAATTTATGCATCGGCCAGCCTCCGCTCGATGCGTCAGGCAAGATCA
ATCTGTCGTCGACTTACAGTTGCAAATCGCCCGCCCAGATCATCAACGTCAACGTGCTCGGGCTCGCACAGTTGACGGCC
AGTCTGTCCAATATATCGGTTCAGGTGCAGGGCACTGAGCAATCGCACACGTTCAACGGCGTACCCGGAATCGACGCGAA
CTATTGGACGGTCAACTCGAATGCGCTCGGTTCAGCGCTCGGTTCAGCGCTGAGCCAACTCGCGGCCGCGACGATCACGG
CCAACATCGGACTCGGGGGCGTGAACCTTCTGTCGCTGCCGTCCACCTTCGTGTCCACCTTGCTCACGTTTTTGACCGGC
CAGCTCCGCCCACTCCTGTCGAGCCTTGACGCAGTCCTCGTTCCGCTGCTGAATCTGCTTGGCGTCCAGGTCGGCGCGGC
GACGGTCCATCAGATCTCGCTCAATTGCGGGGTCGCCCAAACGGTTTACTGA

Upstream 100 bases:

>100_bases
GCAGTGGTTCGGCACGATGTCGGCGTCGGGCGGCGGCAGCAGCGGTGGCAGCGGCGGCGGCCTGTCCGGTGGCGACCTCG
CGCGCTGACGGAGCAAAACG

Downstream 100 bases:

>100_bases
ATAAGCAGATCAGATGAGAAATACGCCCGCAATCGAAGAGCTCGACCTGTACGTCTGGGAAGGCAAGGCGGACATCGTCG
ACCGCGTCGCCCGGTGCATG

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MTIRHSGGTIRRASRQRGAFSVMAIIATLIAITTLGAIGVGNLFFQRRDVQRIADMAALAAVQRMDDACSQPTATATSNA
QSNGLDASNGDTITIECGRWDTSVNPAPSYYAAATSGTTQLNAAKVVVTRQVPFFFVGPPQTVSAVSTARSTNIDTFSVG
ATLAALGGVGCSGGSAPTSGNPGLVNGLIGALLGANLNLNIASYQALACTNVTVGDLVVAAGVGTVDQLLALKLTLPQLL
QLMVKAATQTSVVNASLQASLATLQAIVNANVPGTSIGLGGAGGLLNVALADTQAALNAQVDLLDLLMVGAEIAATGKPA
VVVNVPSLNLGGLTGTQLQVQIISPPSIGIGEGGIDPATGTWRTTASTAAVGVYLNVELGTTQLPIVGALLGALNVGVDV
NLPIYLQAGTGTARLDSTQCTSTQATSTVVITARPGVANLCIGQPPLDASGKINLSSTYSCKSPAQIINVNVLGLAQLTA
SLSNISVQVQGTEQSHTFNGVPGIDANYWTVNSNALGSALGSALSQLAAATITANIGLGGVNLLSLPSTFVSTLLTFLTG
QLRPLLSSLDAVLVPLLNLLGVQVGAATVHQISLNCGVAQTVY

Sequences:

>Translated_603_residues
MTIRHSGGTIRRASRQRGAFSVMAIIATLIAITTLGAIGVGNLFFQRRDVQRIADMAALAAVQRMDDACSQPTATATSNA
QSNGLDASNGDTITIECGRWDTSVNPAPSYYAAATSGTTQLNAAKVVVTRQVPFFFVGPPQTVSAVSTARSTNIDTFSVG
ATLAALGGVGCSGGSAPTSGNPGLVNGLIGALLGANLNLNIASYQALACTNVTVGDLVVAAGVGTVDQLLALKLTLPQLL
QLMVKAATQTSVVNASLQASLATLQAIVNANVPGTSIGLGGAGGLLNVALADTQAALNAQVDLLDLLMVGAEIAATGKPA
VVVNVPSLNLGGLTGTQLQVQIISPPSIGIGEGGIDPATGTWRTTASTAAVGVYLNVELGTTQLPIVGALLGALNVGVDV
NLPIYLQAGTGTARLDSTQCTSTQATSTVVITARPGVANLCIGQPPLDASGKINLSSTYSCKSPAQIINVNVLGLAQLTA
SLSNISVQVQGTEQSHTFNGVPGIDANYWTVNSNALGSALGSALSQLAAATITANIGLGGVNLLSLPSTFVSTLLTFLTG
QLRPLLSSLDAVLVPLLNLLGVQVGAATVHQISLNCGVAQTVY
>Mature_602_residues
TIRHSGGTIRRASRQRGAFSVMAIIATLIAITTLGAIGVGNLFFQRRDVQRIADMAALAAVQRMDDACSQPTATATSNAQ
SNGLDASNGDTITIECGRWDTSVNPAPSYYAAATSGTTQLNAAKVVVTRQVPFFFVGPPQTVSAVSTARSTNIDTFSVGA
TLAALGGVGCSGGSAPTSGNPGLVNGLIGALLGANLNLNIASYQALACTNVTVGDLVVAAGVGTVDQLLALKLTLPQLLQ
LMVKAATQTSVVNASLQASLATLQAIVNANVPGTSIGLGGAGGLLNVALADTQAALNAQVDLLDLLMVGAEIAATGKPAV
VVNVPSLNLGGLTGTQLQVQIISPPSIGIGEGGIDPATGTWRTTASTAAVGVYLNVELGTTQLPIVGALLGALNVGVDVN
LPIYLQAGTGTARLDSTQCTSTQATSTVVITARPGVANLCIGQPPLDASGKINLSSTYSCKSPAQIINVNVLGLAQLTAS
LSNISVQVQGTEQSHTFNGVPGIDANYWTVNSNALGSALGSALSQLAAATITANIGLGGVNLLSLPSTFVSTLLTFLTGQ
LRPLLSSLDAVLVPLLNLLGVQVGAATVHQISLNCGVAQTVY

Specific function: Unknown

COG id: COG4655

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60608; Mature: 60477

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRHSGGTIRRASRQRGAFSVMAIIATLIAITTLGAIGVGNLFFQRRDVQRIADMAALA
CEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVQRMDDACSQPTATATSNAQSNGLDASNGDTITIECGRWDTSVNPAPSYYAAATSGTTQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCE
LNAAKVVVTRQVPFFFVGPPQTVSAVSTARSTNIDTFSVGATLAALGGVGCSGGSAPTSG
ECEEEEEEEECCCEEEECCCCHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
NPGLVNGLIGALLGANLNLNIASYQALACTNVTVGDLVVAAGVGTVDQLLALKLTLPQLL
CCHHHHHHHHHHHCCCCEEEEECEEEEEECCCCHHHHHEECCCCHHHHHHHHHCCHHHHH
QLMVKAATQTSVVNASLQASLATLQAIVNANVPGTSIGLGGAGGLLNVALADTQAALNAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEECCHHHHCCC
VDLLDLLMVGAEIAATGKPAVVVNVPSLNLGGLTGTQLQVQIISPPSIGIGEGGIDPATG
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
TWRTTASTAAVGVYLNVELGTTQLPIVGALLGALNVGVDVNLPIYLQAGTGTARLDSTQC
CEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCEECCCEEEEEECCCCEEECCCCC
TSTQATSTVVITARPGVANLCIGQPPLDASGKINLSSTYSCKSPAQIINVNVLGLAQLTA
CCCCCCEEEEEEECCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEHHHHHH
SLSNISVQVQGTEQSHTFNGVPGIDANYWTVNSNALGSALGSALSQLAAATITANIGLGG
HHCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHEEEEECCCCC
VNLLSLPSTFVSTLLTFLTGQLRPLLSSLDAVLVPLLNLLGVQVGAATVHQISLNCGVAQ
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEE
TVY
CCC
>Mature Secondary Structure 
TIRHSGGTIRRASRQRGAFSVMAIIATLIAITTLGAIGVGNLFFQRRDVQRIADMAALA
EEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVQRMDDACSQPTATATSNAQSNGLDASNGDTITIECGRWDTSVNPAPSYYAAATSGTTQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCE
LNAAKVVVTRQVPFFFVGPPQTVSAVSTARSTNIDTFSVGATLAALGGVGCSGGSAPTSG
ECEEEEEEEECCCEEEECCCCHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
NPGLVNGLIGALLGANLNLNIASYQALACTNVTVGDLVVAAGVGTVDQLLALKLTLPQLL
CCHHHHHHHHHHHCCCCEEEEECEEEEEECCCCHHHHHEECCCCHHHHHHHHHCCHHHHH
QLMVKAATQTSVVNASLQASLATLQAIVNANVPGTSIGLGGAGGLLNVALADTQAALNAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEECCHHHHCCC
VDLLDLLMVGAEIAATGKPAVVVNVPSLNLGGLTGTQLQVQIISPPSIGIGEGGIDPATG
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
TWRTTASTAAVGVYLNVELGTTQLPIVGALLGALNVGVDVNLPIYLQAGTGTARLDSTQC
CEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCEECCCEEEEEECCCCEEECCCCC
TSTQATSTVVITARPGVANLCIGQPPLDASGKINLSSTYSCKSPAQIINVNVLGLAQLTA
CCCCCCEEEEEEECCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEHHHHHH
SLSNISVQVQGTEQSHTFNGVPGIDANYWTVNSNALGSALGSALSQLAAATITANIGLGG
HHCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHEEEEECCCCC
VNLLSLPSTFVSTLLTFLTGQLRPLLSSLDAVLVPLLNLLGVQVGAATVHQISLNCGVAQ
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEE
TVY
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA