Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689534
Identifier: 116689534
GI number: 116689534
Start: 1672875
End: 1673285
Strand: Direct
Name: 116689534
Synonym: Bcen2424_1512
Alternate gene names: NA
Gene position: 1672875-1673285 (Clockwise)
Preceding gene: 116689533
Following gene: 116689539
Centisome position: 48.02
GC content: 62.04
Gene sequence:
>411_bases ATGACACCGTATCGCGATTTGACCGACCACGAATGGCGCTGCGTCGCGCCGCTTCTGCCCGAAATGCAGCCGCGCACCGA GTTGCGCGGCCGGCCGTTAGCCAATACGCGGGCCGTGCTGAACGGGGTGCTCTGGGTGATCTACAGCGGCGCAACCTGGT CGGCCATGCCGCGCCGTTACCCGTCGTATCAAACATGCCATCGCCGCTTCAAGGTGTGGCACGAAACGGGCACGCTGATG AATGTGATGCGTGAGCTTTATGGCGAAGCCGGGATGAATCTATGCAATGAACTCTCCGCGCGGATGCGCAAGCACACGCA ATCGAAAGCGGCGGAGGCGCGTAGCAACGCAGCACCCGCGTATCGTGCACCAGGCAGCTATGCATCGGGTGCAATGAAGC ACGCAGCGTGA
Upstream 100 bases:
>100_bases TAAATTCAGTCGATCTACGGGTATTTTCGGATTTGTCTTATATTCATCGTTGAGGTGAGCCGATATTGTGGTGTCATGGT TATTAAGGCTGGAGATGTCC
Downstream 100 bases:
>100_bases TTCCATCGCTTTTCGTTGTGCGCGCACCAAAAGAAATCGGCCTGACGACGTTGTCGCAGGCCGATTTTTATTGAGCCGCG CGTTTTGGCGCGTGGTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase A-Like Protein; Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; ISAca3 Transposase OrfA; IS5 Family Transposase OrfA; ISBm1 Transposase OrfA; ISPs1 Transposase OrfA; IS5 Family Transposase
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTPYRDLTDHEWRCVAPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKVWHETGTLM NVMRELYGEAGMNLCNELSARMRKHTQSKAAEARSNAAPAYRAPGSYASGAMKHAA
Sequences:
>Translated_136_residues MTPYRDLTDHEWRCVAPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKVWHETGTLM NVMRELYGEAGMNLCNELSARMRKHTQSKAAEARSNAAPAYRAPGSYASGAMKHAA >Mature_135_residues TPYRDLTDHEWRCVAPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKVWHETGTLMN VMRELYGEAGMNLCNELSARMRKHTQSKAAEARSNAAPAYRAPGSYASGAMKHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15454; Mature: 15323
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPYRDLTDHEWRCVAPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRY CCCCCCCCCCCCEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PSYQTCHRRFKVWHETGTLMNVMRELYGEAGMNLCNELSARMRKHTQSKAAEARSNAAPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YRAPGSYASGAMKHAA CCCCCCHHHHHHHCCC >Mature Secondary Structure TPYRDLTDHEWRCVAPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRY CCCCCCCCCCCEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PSYQTCHRRFKVWHETGTLMNVMRELYGEAGMNLCNELSARMRKHTQSKAAEARSNAAPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YRAPGSYASGAMKHAA CCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA