| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689493
Identifier: 116689493
GI number: 116689493
Start: 1624751
End: 1625647
Strand: Direct
Name: 116689493
Synonym: Bcen2424_1471
Alternate gene names: NA
Gene position: 1624751-1625647 (Clockwise)
Preceding gene: 116689492
Following gene: 116689494
Centisome position: 46.64
GC content: 69.9
Gene sequence:
>897_bases ATGCCAACGACCCCAGCGAATCCCCCGGTTCCCCGCCAGCGGCGCGTGCAGTGTGCGAGCGCGGCCGGCCTTCACCACGT CGCCTATACCGAGTGGGGCGATCCCGCGAATCCGCGCGTGCTCGTCTGTGTGCACGGCCTGACCCGCTCCGGGCGCGATT TCGACCGGCTTGCCGCCGCGCTGTCCGATACGTATCGCGTCGTCTGCCCCGATGTCGTCGGGCGCGGCCAATCGGACCGG CTGGCCGACCCGCGGCACTATGCGATTCCGCAGTACGTGGCCGACATGGTGACGCTGATCGCACGGCTCGACGTCGAATC GGTCGACTGGTTCGGTACGTCGATGGGCGGCCTGATCGGCATGGCGCTCGCCGGGCTGCCCGGTTCGCCGCTGCGCCGGA TGATCGTCAACGACGTCGGCCCGCGCATCGAGCCCGATTCGTTGACGCGCATCGGCGAGTACCTCGGCGTGCAGCCGCGC TTTGCGACCGAGCAGGAGGGGATCGACTACCTGACGTCGCTGTCGCTGCCGTTCGGTGCGCTGAGCGCCGACGAGTGGCG CGAGATCAACGGGCCGCTGCTGCACGAACTGCCCGAAGGCGGCTGGACGATGCGCTACGATCCGCGCATCGCCGAGCCGT TCAAGGCGACGACGCCCGAACTGGCCGCGCTTGGCGAGGCCGCGCTATGGCGCGCGATCGAGACGACGGATGCGACGCTC CTCGTCGTGCGCGGCGAGACGTCCGACTTGCTGTCGCGCGAGACGGCGGCCGAAATGGTCCGTCGCGGGCGGCACGTGAC GCAGGTCGAGATTCCGGGGGCGGGCCATGCGCCGGCCTTCGTCAGCGCCGACCAGATTGCGCTCGCGCGGCGGTTTTTCG TCGAAGGCGACGCATAA
Upstream 100 bases:
>100_bases CGCGTGGCGCCCCGTCATTCCGAAGCGGTTTACAATCGTTTGCATCGGGCGCCGCAAGCGTTGTCCCGCGCGTCGCCCCC CGTTCGACAGGATGCCAACG
Downstream 100 bases:
>100_bases ACGCGTCATAATATGCGGTTCGGCGGCACGCGGGCCGTGCCGCCGCCCGATTCCTTACCCATCACGACCGGAACATTTTC ATGGCAGTCATTCGTCACCA
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; Cation Diffusion Facilitator Family Transporter; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Hydrolases Or Acyltransferases; Alpha/Beta Hydrolase Fold-Containing Protein; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPTTPANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDTYRVVCPDVVGRGQSDR LADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIGMALAGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPR FATEQEGIDYLTSLSLPFGALSADEWREINGPLLHELPEGGWTMRYDPRIAEPFKATTPELAALGEAALWRAIETTDATL LVVRGETSDLLSRETAAEMVRRGRHVTQVEIPGAGHAPAFVSADQIALARRFFVEGDA
Sequences:
>Translated_298_residues MPTTPANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDTYRVVCPDVVGRGQSDR LADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIGMALAGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPR FATEQEGIDYLTSLSLPFGALSADEWREINGPLLHELPEGGWTMRYDPRIAEPFKATTPELAALGEAALWRAIETTDATL LVVRGETSDLLSRETAAEMVRRGRHVTQVEIPGAGHAPAFVSADQIALARRFFVEGDA >Mature_297_residues PTTPANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDTYRVVCPDVVGRGQSDRL ADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIGMALAGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPRF ATEQEGIDYLTSLSLPFGALSADEWREINGPLLHELPEGGWTMRYDPRIAEPFKATTPELAALGEAALWRAIETTDATLL VVRGETSDLLSRETAAEMVRRGRHVTQVEIPGAGHAPAFVSADQIALARRFFVEGDA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32443; Mature: 32312
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTPANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAA CCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHH LSDTYRVVCPDVVGRGQSDRLADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIG HHCCCEEECHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH MALAGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPRFATEQEGIDYLTSLSLPFGA HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHCHHHHHHCCCCCCC LSADEWREINGPLLHELPEGGWTMRYDPRIAEPFKATTPELAALGEAALWRAIETTDATL CCCHHHHHCCCCHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE LVVRGETSDLLSRETAAEMVRRGRHVTQVEIPGAGHAPAFVSADQIALARRFFVEGDA EEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure PTTPANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAA CCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHH LSDTYRVVCPDVVGRGQSDRLADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIG HHCCCEEECHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH MALAGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPRFATEQEGIDYLTSLSLPFGA HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHCHHHHHHCCCCCCC LSADEWREINGPLLHELPEGGWTMRYDPRIAEPFKATTPELAALGEAALWRAIETTDATL CCCHHHHHCCCCHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE LVVRGETSDLLSRETAAEMVRRGRHVTQVEIPGAGHAPAFVSADQIALARRFFVEGDA EEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA