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The map label for this gene is yoaB [C]

Identifier: 116689494

GI number: 116689494

Start: 1625728

End: 1626081

Strand: Direct

Name: yoaB [C]

Synonym: Bcen2424_1472

Alternate gene names: 116689494

Gene position: 1625728-1626081 (Clockwise)

Preceding gene: 116689493

Following gene: 116689495

Centisome position: 46.66

GC content: 65.25

Gene sequence:

>354_bases
ATGGCAGTCATTCGTCACCACGTCGGGGCCCGTCTCTCCGAAACCGCGATCCACAACGGTACCGTGTATCTGGCCGGCCA
GATCGCCGAAGACACCACGCAGGACATTCGCGGCCAGACGCGCGAAGTGCTCGGCCACATCGATCGCCTGCTCGCCGAAG
CGAACAGCGACAAGGCGCATCTGCTGTCAGTGCAGATCTACATCTCGGATCTGGCGAACTTCGAAGGCATGAATGCGGAG
TGGGACGCATGGGTCGCACCGGGCAACACGCCGCCGCGCGCCACCGTCGAGGCGAAGCTCGCCGATCCGGCGCTGCTCGT
CGAGATCGTGGTCGTCGCCGCGCAGCGGAGCTGA

Upstream 100 bases:

>100_bases
TCGTCGAAGGCGACGCATAAACGCGTCATAATATGCGGTTCGGCGGCACGCGGGCCGTGCCGCCGCCCGATTCCTTACCC
ATCACGACCGGAACATTTTC

Downstream 100 bases:

>100_bases
GCGTTATCCGACGATGACCGTATTCCGGCAGGCCGTGCAATGACCGAATCCGTTTCCGCCTCTCCCGTCGCGGCGCCGTC
GTTCGACGACGTGCTCGCGT

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAHLLSVQIYISDLANFEGMNAE
WDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQRS

Sequences:

>Translated_117_residues
MAVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAHLLSVQIYISDLANFEGMNAE
WDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQRS
>Mature_116_residues
AVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAHLLSVQIYISDLANFEGMNAEW
DAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQRS

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=40.3508771929825, Blast_Score=89, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12662; Mature: 12531

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAH
CCCCHHHHCCCHHHHEECCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE
LLSVQIYISDLANFEGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQRS
EEEEEEEEEHHCCCCCCCCCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAH
CCCHHHHCCCHHHHEECCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE
LLSVQIYISDLANFEGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQRS
EEEEEEEEEHHCCCCCCCCCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA