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The map label for this gene is glcD [H]

Identifier: 116689475

GI number: 116689475

Start: 1607391

End: 1608812

Strand: Reverse

Name: glcD [H]

Synonym: Bcen2424_1453

Alternate gene names: 116689475

Gene position: 1608812-1607391 (Counterclockwise)

Preceding gene: 116689476

Following gene: 116689474

Centisome position: 46.18

GC content: 69.27

Gene sequence:

>1422_bases
ATGATGTCCTCCGAAGCTTTCGTTTCCGCGTGCCGCGACGCGATCGGCGCCGATCACGTCCTGACCGATCCGCACGATAC
CGAGCCGTTCCTGACCGACTGGCGCCGCCGCTACCAAGGCGCGGCGTGCGCGGTGCTGAGGCCCGCGAACACGGCGGAAG
TCGCCGCGCTCGTGAAGCTCGCCAACGCGCACGGCATCGCGCTCGTGCCGCAGGGCGGCAACACGGGCCTCGCCGGCGGC
GCGACGCCCGATGCGAGCGGCAGCCAGGCCGTGCTGAGCCTGACGCGCCTGAACCGCGTGCGGGCGCTCGATCCGCACAA
CAACACGATCACCGTCGAAGCCGGCGTGATCCTCGCCGACGTGCAGGCGCGCGCCCGCGAAGGCGGCCGGCTGTTCGCGC
TGAGCCTCGCGGCGGAAGGCAGCTGCACGATCGGCGGCAACCTGTCGACCAATGCGGGCGGCACCGCGGTGCTGCGCTAC
GGCAACGCGCGCGAGCTGTGCCTCGGGCTCGAGGTCGTGACGCCGCAGGGCGAGATCTGGGAGGGGCTGCGCGGACTGCG
CAAGGACAACACCGGCTACGACCTGCGCGACCTGTTCATCGGCGCCGAAGGCACGCTCGGGATCATCACGGCGGCCGTGA
TGAAGCTGCATCCGCTGCCGGCCGCGCAGGTCACGGCGCTGGCCGCGCTCGAATCGCCGCACGCGGCGCTCGATTTCCTC
GCGCTCGCGCAGCGCGCGGCCGGGCCGCTGCTGACCGGCTTCGAGCTGATGTCGGATTTCTGCATGCAGCTGGTCGGCAA
GCACTATCCGCAACTGCGCTACCCGTTCGCGCAGACGCATGCGCAAACGGTGCTGCTGGAGCTGTCCGACAACGAAAGCG
AAGCGCATGCGCGCGCGCTGTTCGAGAAGCTGATGGAAGACGCGTTCGAGGCCGGGCTCGTGGTCGACGCGGTGGTCGCG
GAGAACCTCGCGCAATCGCGCGCGTTCTGGGACCTGCGCGAGCACATCCCGCTCGCGCAGGCCGACGAAGGGCTCAACAT
CAAGCACGACATCGCGGTGCCGATCTCGTCGATCGCACGCTTCATCGACGAGACCGACGCGGCGATCCAGCAGGCCGCGC
CGGGCGCGCGCATGGTCACGTTCGGCCACCTCGGCGACGGCAACCTGCACTACAACGTGCAGACGCCCGAAGGCGGCGAT
CCGAAGGCGTTCCTCGCGGAATTCCAGAAGCCGATCAACCGGATCGTCTACGACAACGTGCACCGCCATCACGGCACGAT
CAGCGCGGAGCACGGCATCGGCCAGTTGAAGATCGACGACGCGCAACGCTACAAGTCGCCGGTCGAAACCACGCTGATGC
GCACGCTGAAGACCGCGCTCGACCCGCGCGGCCTGATGAATCCCGGCAAGGTCCTGCGCTGA

Upstream 100 bases:

>100_bases
TGCCGTCGGCTTCTTCGTGGCGGCGCTGGCTTACGTCGCGCCGTTCAAGCGCGCGGCGAAAAAACCGCGCGCCACGTCCT
GACCCTTACGCGACAAGGTG

Downstream 100 bases:

>100_bases
CGCCGCCTACCCAGGAGCCAAGCCCGTGAAAGTCCGCGTCCTGTCCGACCTGCATCTCGAAAACAACCTGCCCGACGCGA
TCCCGCATGCCGACGCGGAT

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYQGAACAVLRPANTAEVAALVKLANAHGIALVPQGGNTGLAGG
ATPDASGSQAVLSLTRLNRVRALDPHNNTITVEAGVILADVQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRY
GNARELCLGLEVVTPQGEIWEGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARALFEKLMEDAFEAGLVVDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGD
PKAFLAEFQKPINRIVYDNVHRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR

Sequences:

>Translated_473_residues
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYQGAACAVLRPANTAEVAALVKLANAHGIALVPQGGNTGLAGG
ATPDASGSQAVLSLTRLNRVRALDPHNNTITVEAGVILADVQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRY
GNARELCLGLEVVTPQGEIWEGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARALFEKLMEDAFEAGLVVDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGD
PKAFLAEFQKPINRIVYDNVHRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR
>Mature_473_residues
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYQGAACAVLRPANTAEVAALVKLANAHGIALVPQGGNTGLAGG
ATPDASGSQAVLSLTRLNRVRALDPHNNTITVEAGVILADVQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRY
GNARELCLGLEVVTPQGEIWEGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARALFEKLMEDAFEAGLVVDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGD
PKAFLAEFQKPINRIVYDNVHRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=453, Percent_Identity=36.8653421633554, Blast_Score=273, Evalue=2e-73,
Organism=Homo sapiens, GI37595756, Length=475, Percent_Identity=31.7894736842105, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI37595754, Length=498, Percent_Identity=30.5220883534137, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI4501993, Length=208, Percent_Identity=32.6923076923077, Blast_Score=102, Evalue=6e-22,
Organism=Escherichia coli, GI1789351, Length=476, Percent_Identity=28.5714285714286, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI1787977, Length=503, Percent_Identity=24.4532803180915, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI48994907, Length=223, Percent_Identity=26.9058295964126, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17534361, Length=469, Percent_Identity=33.9019189765458, Blast_Score=268, Evalue=4e-72,
Organism=Caenorhabditis elegans, GI71992373, Length=435, Percent_Identity=29.1954022988506, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71992381, Length=438, Percent_Identity=28.310502283105, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71992392, Length=354, Percent_Identity=29.9435028248588, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17556096, Length=198, Percent_Identity=24.7474747474747, Blast_Score=83, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6320023, Length=458, Percent_Identity=35.8078602620087, Blast_Score=306, Evalue=5e-84,
Organism=Saccharomyces cerevisiae, GI6320764, Length=470, Percent_Identity=32.1276595744681, Blast_Score=262, Evalue=8e-71,
Organism=Saccharomyces cerevisiae, GI6320027, Length=440, Percent_Identity=28.1818181818182, Blast_Score=147, Evalue=3e-36,
Organism=Drosophila melanogaster, GI18921117, Length=459, Percent_Identity=37.4727668845316, Blast_Score=285, Evalue=5e-77,
Organism=Drosophila melanogaster, GI24639277, Length=459, Percent_Identity=37.4727668845316, Blast_Score=285, Evalue=5e-77,
Organism=Drosophila melanogaster, GI24639275, Length=459, Percent_Identity=37.4727668845316, Blast_Score=285, Evalue=5e-77,
Organism=Drosophila melanogaster, GI24653753, Length=219, Percent_Identity=30.1369863013699, Blast_Score=102, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50620; Mature: 50620

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYQGAACAVLRPANTAEVAALVKL
CCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
ANAHGIALVPQGGNTGLAGGATPDASGSQAVLSLTRLNRVRALDPHNNTITVEAGVILAD
HCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEECCEEEEE
VQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYGNARELCLGLEVVTPQGEIW
CHHHHCCCCEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHH
EGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
HHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARAL
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEEECCCCHHHHHHHH
FEKLMEDAFEAGLVVDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIAR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHH
FIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGDPKAFLAEFQKPINRIVYDNV
HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCH
HRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR
HHHCCCEEECCCCCEEEECHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYQGAACAVLRPANTAEVAALVKL
CCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
ANAHGIALVPQGGNTGLAGGATPDASGSQAVLSLTRLNRVRALDPHNNTITVEAGVILAD
HCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEECCEEEEE
VQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYGNARELCLGLEVVTPQGEIW
CHHHHCCCCEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHH
EGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
HHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARAL
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEEECCCCHHHHHHHH
FEKLMEDAFEAGLVVDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIAR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHH
FIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGDPKAFLAEFQKPINRIVYDNV
HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCH
HRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR
HHHCCCEEECCCCCEEEECHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]