| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yhhP [C]
Identifier: 116689456
GI number: 116689456
Start: 1583200
End: 1583427
Strand: Direct
Name: yhhP [C]
Synonym: Bcen2424_1434
Alternate gene names: 116689456
Gene position: 1583200-1583427 (Clockwise)
Preceding gene: 116689455
Following gene: 116689457
Centisome position: 45.44
GC content: 61.4
Gene sequence:
>228_bases ATGCAGATTCACAAGGAAGTGGACGCGCGCGGGCTCAATTGCCCGTTGCCGATCCTGCGTGCCAAGAAAGCGCTTGCCGA TATGGAAAGCGGGCAGATCCTCAAGGTGCTCGCGACCGATCCGGGCTCGCAGCGCGATTTCGCCGCGTTCGCGAAGCAGA CGGGCAACGAGATCGTCGAATCGACGACGCAGGACAAGACCTTCGTGTTCCTGATGCGTCGCCGCTGA
Upstream 100 bases:
>100_bases CGCGGGGCCGTGGGCGGCCGGGCAGGCGCGGCGGCGCTGCGGTAAAATCGCGGCTTCCTCCCGCGCCGTGTGTGGCGCGT CATTCGAAGGTCGACAGCCG
Downstream 100 bases:
>100_bases AGGCACGCATCGCGCGTCCCGCGGTGCCGGGCTCCCGGCCGGCCGCGCCTCGTCAGTCGCGCCTGTCCGACCGCCCCAAG CCGGTTGCCCGAAGCCGGTC
Product: SirA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MQIHKEVDARGLNCPLPILRAKKALADMESGQILKVLATDPGSQRDFAAFAKQTGNEIVESTTQDKTFVFLMRRR
Sequences:
>Translated_75_residues MQIHKEVDARGLNCPLPILRAKKALADMESGQILKVLATDPGSQRDFAAFAKQTGNEIVESTTQDKTFVFLMRRR >Mature_75_residues MQIHKEVDARGLNCPLPILRAKKALADMESGQILKVLATDPGSQRDFAAFAKQTGNEIVESTTQDKTFVFLMRRR
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 [H]
Pfam domain/function: PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 8404; Mature: 8404
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIHKEVDARGLNCPLPILRAKKALADMESGQILKVLATDPGSQRDFAAFAKQTGNEIVE CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH STTQDKTFVFLMRRR CCCCCCEEEEEEECC >Mature Secondary Structure MQIHKEVDARGLNCPLPILRAKKALADMESGQILKVLATDPGSQRDFAAFAKQTGNEIVE CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH STTQDKTFVFLMRRR CCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]