| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is livG [H]
Identifier: 116689438
GI number: 116689438
Start: 1562355
End: 1563107
Strand: Direct
Name: livG [H]
Synonym: Bcen2424_1416
Alternate gene names: 116689438
Gene position: 1562355-1563107 (Clockwise)
Preceding gene: 116689437
Following gene: 116689439
Centisome position: 44.84
GC content: 73.17
Gene sequence:
>753_bases ATGAACGGCAACGCGATCGCGCTGCACGGCGTGGTGCAGCGCTTCGGCGCGCAGACCGTGCTCGACGGCGTCGATCTGAG CATCGCGGCCGGTGAGCGCCACGCGCTGATCGGGCCGAACGGCGCGGGCAAGTCGACGCTGTTCGGCGTGATCGCCGGGG CGACGCGTCCGACGCGCGGGCGCGTCATGCTGCACGGCGTCGAGCTGCGCGGGCGCGGGCCGGTCGTCGCGAGCCGCCTC GGCATCGGCCGCAGTTTCCAGCAGACGAGCGCATTCGCGCGCCTGAGCGTATTCGACAACCTGCGCTGCGCGGCGCTGCA TGCGCCGGCCGAACGGCGGCGCTGGTGGAACCGGCTGCGCGAATCCGCGTCGGTCGATCTCGCGGCCGCGCGCGTGCTGC ACGACATCGGCCTCGACGCGCGGCGCGATACGCCGGCCGGTGAATTGAGCTACGCGGAGCAACGCGCGCTCGATCTCGGG ATCGCGCTCGCGAGCGGTGCACGTACGCTGCTGCTCGACGAGCCGACGGCCGGCATGAGCCGCGCGCAGGCGGCGCGGAT GATCGCGCTGATCCGCGCGACGACGCAGGGCCGCACCGTGCTGATGATCGAGCACGACATGGACGCGGTGTTCGGTTTCG CCGAACGCATCACGGTGCTCGTGCGCGGCGCGGTGGTCGCGACCGGCGCGCCCGATGCGATCCGCGCCGATCCGAGCGTG CGTGCCGCGTACCTGGGCGAGGGCGCGGCATGA
Upstream 100 bases:
>100_bases GGGCCGTCGCGGCTTCGGCGGCCGGCATCGGCACGCTGCTGTGGGGCTGGCGCGCGCGGCTCGGGCACGGCGCGGCGGTC GCCACGCAGGAGGACGCACG
Downstream 100 bases:
>100_bases ACGCCGTGCTCGACATTCGCGGGCTGCGCGCGTGGTACGGGAGGCAGCCCGTGCTCGACGGTGTCGATCTCGCGCTCGCG CCGGGCGAGACGCTCGCGCT
Product: ABC transporter related
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MNGNAIALHGVVQRFGAQTVLDGVDLSIAAGERHALIGPNGAGKSTLFGVIAGATRPTRGRVMLHGVELRGRGPVVASRL GIGRSFQQTSAFARLSVFDNLRCAALHAPAERRRWWNRLRESASVDLAAARVLHDIGLDARRDTPAGELSYAEQRALDLG IALASGARTLLLDEPTAGMSRAQAARMIALIRATTQGRTVLMIEHDMDAVFGFAERITVLVRGAVVATGAPDAIRADPSV RAAYLGEGAA
Sequences:
>Translated_250_residues MNGNAIALHGVVQRFGAQTVLDGVDLSIAAGERHALIGPNGAGKSTLFGVIAGATRPTRGRVMLHGVELRGRGPVVASRL GIGRSFQQTSAFARLSVFDNLRCAALHAPAERRRWWNRLRESASVDLAAARVLHDIGLDARRDTPAGELSYAEQRALDLG IALASGARTLLLDEPTAGMSRAQAARMIALIRATTQGRTVLMIEHDMDAVFGFAERITVLVRGAVVATGAPDAIRADPSV RAAYLGEGAA >Mature_250_residues MNGNAIALHGVVQRFGAQTVLDGVDLSIAAGERHALIGPNGAGKSTLFGVIAGATRPTRGRVMLHGVELRGRGPVVASRL GIGRSFQQTSAFARLSVFDNLRCAALHAPAERRRWWNRLRESASVDLAAARVLHDIGLDARRDTPAGELSYAEQRALDLG IALASGARTLLLDEPTAGMSRAQAARMIALIRATTQGRTVLMIEHDMDAVFGFAERITVLVRGAVVATGAPDAIRADPSV RAAYLGEGAA
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=228, Percent_Identity=27.6315789473684, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI30795238, Length=228, Percent_Identity=27.6315789473684, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI105990541, Length=211, Percent_Identity=27.9620853080569, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI153792144, Length=232, Percent_Identity=28.0172413793103, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI116734710, Length=207, Percent_Identity=28.5024154589372, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI31657092, Length=217, Percent_Identity=28.110599078341, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI47078218, Length=214, Percent_Identity=27.5700934579439, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI150417984, Length=234, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI21536376, Length=223, Percent_Identity=26.9058295964126, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI45446740, Length=214, Percent_Identity=27.5700934579439, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI27262624, Length=212, Percent_Identity=29.7169811320755, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI27262626, Length=212, Percent_Identity=29.7169811320755, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI27477115, Length=213, Percent_Identity=28.6384976525822, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27436953, Length=210, Percent_Identity=27.6190476190476, Blast_Score=75, Evalue=5e-14, Organism=Escherichia coli, GI1789864, Length=261, Percent_Identity=33.7164750957854, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1790525, Length=240, Percent_Identity=27.9166666666667, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1788210, Length=224, Percent_Identity=28.5714285714286, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI87082268, Length=247, Percent_Identity=31.5789473684211, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI48995001, Length=219, Percent_Identity=31.5068493150685, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787792, Length=233, Percent_Identity=29.6137339055794, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87081709, Length=248, Percent_Identity=25, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1789672, Length=236, Percent_Identity=26.6949152542373, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1788761, Length=253, Percent_Identity=27.2727272727273, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1789593, Length=239, Percent_Identity=29.7071129707113, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=26.2222222222222, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI87081791, Length=245, Percent_Identity=27.3469387755102, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1788472, Length=226, Percent_Identity=26.1061946902655, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI87081782, Length=244, Percent_Identity=28.2786885245902, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787029, Length=241, Percent_Identity=29.045643153527, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788225, Length=244, Percent_Identity=27.4590163934426, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI48994943, Length=244, Percent_Identity=34.0163934426229, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789991, Length=226, Percent_Identity=26.1061946902655, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786398, Length=242, Percent_Identity=26.8595041322314, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788897, Length=219, Percent_Identity=27.3972602739726, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788450, Length=242, Percent_Identity=28.099173553719, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1790739, Length=254, Percent_Identity=27.9527559055118, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1789032, Length=244, Percent_Identity=26.6393442622951, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787370, Length=248, Percent_Identity=24.5967741935484, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790467, Length=246, Percent_Identity=28.8617886178862, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1786872, Length=236, Percent_Identity=25, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1786319, Length=222, Percent_Identity=27.9279279279279, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787105, Length=211, Percent_Identity=28.9099526066351, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1790544, Length=251, Percent_Identity=28.6852589641434, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786253, Length=224, Percent_Identity=27.6785714285714, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787548, Length=225, Percent_Identity=28.8888888888889, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786563, Length=244, Percent_Identity=26.6393442622951, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1786803, Length=223, Percent_Identity=26.457399103139, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1787089, Length=232, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789586, Length=261, Percent_Identity=25.6704980842912, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786703, Length=216, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789873, Length=213, Percent_Identity=30.5164319248826, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787112, Length=213, Percent_Identity=27.6995305164319, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI87082267, Length=253, Percent_Identity=25.6916996047431, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1787712, Length=236, Percent_Identity=22.4576271186441, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081834, Length=216, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787164, Length=226, Percent_Identity=28.7610619469027, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1789891, Length=218, Percent_Identity=30.2752293577982, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788002, Length=239, Percent_Identity=28.8702928870293, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786345, Length=255, Percent_Identity=24.7058823529412, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788506, Length=237, Percent_Identity=25.3164556962025, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788644, Length=250, Percent_Identity=23.6, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17510237, Length=238, Percent_Identity=32.7731092436975, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17565586, Length=217, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71983523, Length=213, Percent_Identity=30.5164319248826, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71983516, Length=213, Percent_Identity=30.5164319248826, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71983510, Length=213, Percent_Identity=30.5164319248826, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI115533608, Length=201, Percent_Identity=30.3482587064677, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193209708, Length=220, Percent_Identity=25, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193202349, Length=221, Percent_Identity=25.3393665158371, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24643674, Length=219, Percent_Identity=26.027397260274, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI221512771, Length=228, Percent_Identity=26.3157894736842, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24666092, Length=228, Percent_Identity=25.8771929824561, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI28571209, Length=227, Percent_Identity=27.3127753303965, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24648314, Length=234, Percent_Identity=24.3589743589744, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI221500365, Length=230, Percent_Identity=23.4782608695652, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI116007184, Length=230, Percent_Identity=23.4782608695652, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI28574744, Length=230, Percent_Identity=28.695652173913, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI85726357, Length=215, Percent_Identity=28.8372093023256, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28574150, Length=224, Percent_Identity=24.5535714285714, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007328, Length=224, Percent_Identity=24.5535714285714, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26361; Mature: 26361
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGNAIALHGVVQRFGAQTVLDGVDLSIAAGERHALIGPNGAGKSTLFGVIAGATRPTRG CCCCEEEHHHHHHHHCCHHHHCCCCEEEECCCCEEEECCCCCCCHHHEEEEECCCCCCCC RVMLHGVELRGRGPVVASRLGIGRSFQQTSAFARLSVFDNLRCAALHAPAERRRWWNRLR EEEEEEEEECCCCCEEEHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH ESASVDLAAARVLHDIGLDARRDTPAGELSYAEQRALDLGIALASGARTLLLDEPTAGMS HCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEECCCCCHH RAQAARMIALIRATTQGRTVLMIEHDMDAVFGFAERITVLVRGAVVATGAPDAIRADPSV HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCC RAAYLGEGAA EEEECCCCCC >Mature Secondary Structure MNGNAIALHGVVQRFGAQTVLDGVDLSIAAGERHALIGPNGAGKSTLFGVIAGATRPTRG CCCCEEEHHHHHHHHCCHHHHCCCCEEEECCCCEEEECCCCCCCHHHEEEEECCCCCCCC RVMLHGVELRGRGPVVASRLGIGRSFQQTSAFARLSVFDNLRCAALHAPAERRRWWNRLR EEEEEEEEECCCCCEEEHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH ESASVDLAAARVLHDIGLDARRDTPAGELSYAEQRALDLGIALASGARTLLLDEPTAGMS HCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEECCCCCHH RAQAARMIALIRATTQGRTVLMIEHDMDAVFGFAERITVLVRGAVVATGAPDAIRADPSV HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCC RAAYLGEGAA EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]