Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689331
Identifier: 116689331
GI number: 116689331
Start: 1442089
End: 1442526
Strand: Reverse
Name: 116689331
Synonym: Bcen2424_1309
Alternate gene names: NA
Gene position: 1442526-1442089 (Counterclockwise)
Preceding gene: 116689334
Following gene: 116689329
Centisome position: 41.41
GC content: 66.67
Gene sequence:
>438_bases ATGAAAAACAACGTTCTCAAGCCAGCCCTCTGCGCGTCGCTGCTCGTACTCGCGACCACCGCCGGCACCGCGTCGGCGAA AGCGCTCGACGACGCGCTCGACTGTCATTCGACCGGCCACAAGTTCGTCGCGCCGCTGCTCGCCGCCGGCGACATCCAGT CCGAGCCGATGCACGTCGAATCGAATTCGGTCAACGCGTTCCGCACGAACCGCTCGCTGACGGCCTACGGCTTCGGCGTC TACGTCGTGCTCGGTTACCAGGCGAACGATCCGATCTTCCGGCCGGGCGACGGCACGCCGATCGGCGACTGGGCCTACGG CGTCGTCGTGCGCGGCACGAAGAGCGCGGTCGAGGAAGCCGTGCGCAAGGCCGGCAGCGATGCAACCGTCAAGCAGGCGT TCCCGTTCCTGACCGCGATCGTCTGCTCGTCCGATTGA
Upstream 100 bases:
>100_bases TCAACCGCCGCGTCGACGCACCCACGCCTCCACCACGAGTCCCGCGCACGGAACTTGCTGGAACACGCGATAATACGTGT GAAACAACCCGCAACCGCGC
Downstream 100 bases:
>100_bases GCCGACCGTCGGTACCCGCGTTGGGTGGCCCTTGACGATCGTGCGGGGCGATACCTGACGAGCGCCTCACCCGCACATCC ATCCACCCGGCGCCCGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKNNVLKPALCASLLVLATTAGTASAKALDDALDCHSTGHKFVAPLLAAGDIQSEPMHVESNSVNAFRTNRSLTAYGFGV YVVLGYQANDPIFRPGDGTPIGDWAYGVVVRGTKSAVEEAVRKAGSDATVKQAFPFLTAIVCSSD
Sequences:
>Translated_145_residues MKNNVLKPALCASLLVLATTAGTASAKALDDALDCHSTGHKFVAPLLAAGDIQSEPMHVESNSVNAFRTNRSLTAYGFGV YVVLGYQANDPIFRPGDGTPIGDWAYGVVVRGTKSAVEEAVRKAGSDATVKQAFPFLTAIVCSSD >Mature_145_residues MKNNVLKPALCASLLVLATTAGTASAKALDDALDCHSTGHKFVAPLLAAGDIQSEPMHVESNSVNAFRTNRSLTAYGFGV YVVLGYQANDPIFRPGDGTPIGDWAYGVVVRGTKSAVEEAVRKAGSDATVKQAFPFLTAIVCSSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15146; Mature: 15146
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNVLKPALCASLLVLATTAGTASAKALDDALDCHSTGHKFVAPLLAAGDIQSEPMHVE CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEE SNSVNAFRTNRSLTAYGFGVYVVLGYQANDPIFRPGDGTPIGDWAYGVVVRGTKSAVEEA CCCCEEEECCCCEEEECCEEEEEEEEECCCCEEECCCCCCCCCCEEEEEEECCHHHHHHH VRKAGSDATVKQAFPFLTAIVCSSD HHHCCCCCHHHHHHHHHHHHEECCC >Mature Secondary Structure MKNNVLKPALCASLLVLATTAGTASAKALDDALDCHSTGHKFVAPLLAAGDIQSEPMHVE CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEE SNSVNAFRTNRSLTAYGFGVYVVLGYQANDPIFRPGDGTPIGDWAYGVVVRGTKSAVEEA CCCCEEEECCCCEEEECCEEEEEEEEECCCCEEECCCCCCCCCCEEEEEEECCHHHHHHH VRKAGSDATVKQAFPFLTAIVCSSD HHHCCCCCHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA