Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is ppk [H]
Identifier: 116689329
GI number: 116689329
Start: 1438103
End: 1440166
Strand: Reverse
Name: ppk [H]
Synonym: Bcen2424_1307
Alternate gene names: 116689329
Gene position: 1440166-1438103 (Counterclockwise)
Preceding gene: 116689331
Following gene: 116689317
Centisome position: 41.34
GC content: 65.7
Gene sequence:
>2064_bases ATGTCCGTCCGTTACCCGCTTCTCAACCGTGAACTCGGCATCCTCGGTTTCAACGAGCGCGTGCTGGCCCAGGCGGCCGA TCCGCAAGTCCCGTTGCTCGAGCGCCTGCGCTTCATCTGCATCACCAGCAGCAATCTCGACGAATTCTTCGAAGTCCGGA TGGCCGGCCTGCAGGAACAGATCCGCGACAACCCCGGCGCGCTGACGCCCGACGGCATGTCGCTGCAGCACGCTTACGAT CTCGTCGTCGAACGCGCGCAGCGGCTCGTGCATCGACAGTACACGATGCTGCACGAAACCGTGCTGCCGGCGCTCGAACA GGAAGGCATCTACTTCCACGCGAGTGACTCGTGGAACGACGAGCAGCTCGAATGGGCGCGACGCTACTTCCTCGACGAAC TGCTGCCGGTGCTGACGCCGATCGGCCTCGATCCGGCCCACCCGTTCCCGCGCGTGCTGAACAAGAGCCTGAACTTCGTC GTCGAGCTCGAAGGCCGCGACGCGTTCGGCCGCCAGGCCGTGATGGGCATCGTGCAGGCGCCGCGCGCGCTGCCGCGCGT CGTGCGCATGCCGCATGCGCTGTCGGGTTTCGAGCACGGCTTCGTGCTGCTGAGCTCGTTCATGCAGCGCTTCGTCGGCG AACTCTTCCCGCAACTCGTCGTGAAGAGCTGCAACCAGTTCCGCATCACGCGCAACAGCGAGCTGTTCGTCGACGAAGAC GAAATCACGAACCTGCGTGTCGCGCTGCAGGGCGAACTGCCCGCGCGCCACCTCGGCAACGCGGTGCGCCTCGAAGTGTC GGCCGACACGCCGCTGCACATCGTGCGGCGCCTGCTCGAGGAAAGCGAACTCGGCGACAAGGACTGCTATCGCGTGGCCG GGTCCGTGAACCTCGTGCGCCTGATGCAGATTCCCGATCTCGTCGACCGCCCGGACCTGAAGTTCACGCCGTTCACCGCA TCGACCCCCGCGGTAATCGCCAACGCGCCGACGATGTTCGACGCGATCGACGCCGGCGACATCCTGCTGCACCACCCGTA CGAGAGCTTCCAGCCCGTGCTCGAACTGCTGCAGCAGGCCGCGAGAGACCCGAGCGTCGTCGCGATCAAGCAGACGATCT ATCGCACCGGCACCGACTCGCCGCTGATGGACGCGCTGATGGAAGCCGCGCGCAACGGCAAGGAAGTGACCGTCGTCGTC GAGCTGCTCGCGCGCTTCGACGAGGAAACCAACATCAACTGGGCGTCGCAGCTCGAAGCCGTCGGCGCACATGTCGTGTA CGGCGTGGTCGGCCACAAGTGCCACGCGAAGATGATGCTGATCGTGCGACGCGTCGTGCAGGCCGGCAAGGCGTCGCTGC GCCGCTACGTGCATCTCGGCACCGGCAACTACCATCCGCGCACCGCACGCCTCTACACCGACTTCGGGCTGATGACGGCC GACCAGAAGATCTGCGAGGACGTGCATCACGTGTTCCAGCAACTGACCGGGATCGGCGGCGAACTGACGCTGCACGAGCT GTGGCAGTCACCGTTCACGCTGCATCCGCGCATCATCGAGTCGATCCGCGCGGAGATCGACAATGCGCAGGCCGGCAAGC GCGCGCGCATCGTCGCGAAAATGAACGCGCTGCTGGAACCGTCGGTGATCGCCGCGCTGTACGAAGCGTCGCAGGCCGGC GTCAAGGTCGATCTGATCGTGCGCGGCGTCTGCGCGCTGAAGCCCGGTGTGCCGGGGCTGTCGGAAAACATCACGGTGCG CTCGATCGTCGGCCGCTTCCTCGAACACCACCGCATCTACTATTTCCATGCGGGCGGCGCCGAGGACGTCTATCTGTCGA GTGCCGACTGGATGGACCGCAACCTGTTCCGCCGCGTCGAAGTCGCGTTCCCGATCCGCGAGCGCAAGCTGAAGCGGCGC GTGATCGCCGAGGGGCTGTCGGTGTGCCTCGGCGACAACCAGTCGGCATGGCAGATGCACAGCGACGGCCATTATCGCCG GCGCCGCACCGGCAAGACGATCCGCAACGCTCAGCTCGGGCTGCTCGCGAAGTTCTGCTCGTGA
Upstream 100 bases:
>100_bases TCCCGATATAAAACCATTATTGTCATCAGCACGTCATCGTACCGTGAGAGTTTCCGAGCGTCCTTTCGAATCATCGCCTG AATTACCTCCTACTCTGCCG
Downstream 100 bases:
>100_bases ACCGTCGGCGCGATGCAGATCGCGCCGACGCATCGCCATGAAAAAAAGCAGCCCGCGGGCTGCTTTTTTGAACGCCGACG AGCCGCTACACGATCATGCT
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 687; Mature: 686
Protein sequence:
>687_residues MSVRYPLLNRELGILGFNERVLAQAADPQVPLLERLRFICITSSNLDEFFEVRMAGLQEQIRDNPGALTPDGMSLQHAYD LVVERAQRLVHRQYTMLHETVLPALEQEGIYFHASDSWNDEQLEWARRYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFV VELEGRDAFGRQAVMGIVQAPRALPRVVRMPHALSGFEHGFVLLSSFMQRFVGELFPQLVVKSCNQFRITRNSELFVDED EITNLRVALQGELPARHLGNAVRLEVSADTPLHIVRRLLEESELGDKDCYRVAGSVNLVRLMQIPDLVDRPDLKFTPFTA STPAVIANAPTMFDAIDAGDILLHHPYESFQPVLELLQQAARDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVV ELLARFDEETNINWASQLEAVGAHVVYGVVGHKCHAKMMLIVRRVVQAGKASLRRYVHLGTGNYHPRTARLYTDFGLMTA DQKICEDVHHVFQQLTGIGGELTLHELWQSPFTLHPRIIESIRAEIDNAQAGKRARIVAKMNALLEPSVIAALYEASQAG VKVDLIVRGVCALKPGVPGLSENITVRSIVGRFLEHHRIYYFHAGGAEDVYLSSADWMDRNLFRRVEVAFPIRERKLKRR VIAEGLSVCLGDNQSAWQMHSDGHYRRRRTGKTIRNAQLGLLAKFCS
Sequences:
>Translated_687_residues MSVRYPLLNRELGILGFNERVLAQAADPQVPLLERLRFICITSSNLDEFFEVRMAGLQEQIRDNPGALTPDGMSLQHAYD LVVERAQRLVHRQYTMLHETVLPALEQEGIYFHASDSWNDEQLEWARRYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFV VELEGRDAFGRQAVMGIVQAPRALPRVVRMPHALSGFEHGFVLLSSFMQRFVGELFPQLVVKSCNQFRITRNSELFVDED EITNLRVALQGELPARHLGNAVRLEVSADTPLHIVRRLLEESELGDKDCYRVAGSVNLVRLMQIPDLVDRPDLKFTPFTA STPAVIANAPTMFDAIDAGDILLHHPYESFQPVLELLQQAARDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVV ELLARFDEETNINWASQLEAVGAHVVYGVVGHKCHAKMMLIVRRVVQAGKASLRRYVHLGTGNYHPRTARLYTDFGLMTA DQKICEDVHHVFQQLTGIGGELTLHELWQSPFTLHPRIIESIRAEIDNAQAGKRARIVAKMNALLEPSVIAALYEASQAG VKVDLIVRGVCALKPGVPGLSENITVRSIVGRFLEHHRIYYFHAGGAEDVYLSSADWMDRNLFRRVEVAFPIRERKLKRR VIAEGLSVCLGDNQSAWQMHSDGHYRRRRTGKTIRNAQLGLLAKFCS >Mature_686_residues SVRYPLLNRELGILGFNERVLAQAADPQVPLLERLRFICITSSNLDEFFEVRMAGLQEQIRDNPGALTPDGMSLQHAYDL VVERAQRLVHRQYTMLHETVLPALEQEGIYFHASDSWNDEQLEWARRYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFVV ELEGRDAFGRQAVMGIVQAPRALPRVVRMPHALSGFEHGFVLLSSFMQRFVGELFPQLVVKSCNQFRITRNSELFVDEDE ITNLRVALQGELPARHLGNAVRLEVSADTPLHIVRRLLEESELGDKDCYRVAGSVNLVRLMQIPDLVDRPDLKFTPFTAS TPAVIANAPTMFDAIDAGDILLHHPYESFQPVLELLQQAARDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVVE LLARFDEETNINWASQLEAVGAHVVYGVVGHKCHAKMMLIVRRVVQAGKASLRRYVHLGTGNYHPRTARLYTDFGLMTAD QKICEDVHHVFQQLTGIGGELTLHELWQSPFTLHPRIIESIRAEIDNAQAGKRARIVAKMNALLEPSVIAALYEASQAGV KVDLIVRGVCALKPGVPGLSENITVRSIVGRFLEHHRIYYFHAGGAEDVYLSSADWMDRNLFRRVEVAFPIRERKLKRRV IAEGLSVCLGDNQSAWQMHSDGHYRRRRTGKTIRNAQLGLLAKFCS
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=663, Percent_Identity=35.8974358974359, Blast_Score=369, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 77392; Mature: 77261
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRYPLLNRELGILGFNERVLAQAADPQVPLLERLRFICITSSNLDEFFEVRMAGLQEQ CCCCCCCCCCCCCEEECCHHHHHHCCCCCCCHHHCCEEEEEECCCHHHHHHHHHHHHHHH IRDNPGALTPDGMSLQHAYDLVVERAQRLVHRQYTMLHETVLPALEQEGIYFHASDSWND HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCH EQLEWARRYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFVVELEGRDAFGRQAVMGIVQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC PRALPRVVRMPHALSGFEHGFVLLSSFMQRFVGELFPQLVVKSCNQFRITRNSELFVDED HHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC EITNLRVALQGELPARHLGNAVRLEVSADTPLHIVRRLLEESELGDKDCYRVAGSVNLVR CCCEEEEEEECCCCHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEE LMQIPDLVDRPDLKFTPFTASTPAVIANAPTMFDAIDAGDILLHHPYESFQPVLELLQQA EHHCCCCCCCCCCEECCCCCCCCCEEECCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHH ARDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVVELLARFDEETNINWASQLEA CCCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCHHHHHHH VGAHVVYGVVGHKCHAKMMLIVRRVVQAGKASLRRYVHLGTGNYHPRTARLYTDFGLMTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCC DQKICEDVHHVFQQLTGIGGELTLHELWQSPFTLHPRIIESIRAEIDNAQAGKRARIVAK CHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH MNALLEPSVIAALYEASQAGVKVDLIVRGVCALKPGVPGLSENITVRSIVGRFLEHHRIY HHHHHCHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCEEE YFHAGGAEDVYLSSADWMDRNLFRRVEVAFPIRERKLKRRVIAEGLSVCLGDNQSAWQMH EEECCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCCCEEEC SDGHYRRRRTGKTIRNAQLGLLAKFCS CCCCHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SVRYPLLNRELGILGFNERVLAQAADPQVPLLERLRFICITSSNLDEFFEVRMAGLQEQ CCCCCCCCCCCCEEECCHHHHHHCCCCCCCHHHCCEEEEEECCCHHHHHHHHHHHHHHH IRDNPGALTPDGMSLQHAYDLVVERAQRLVHRQYTMLHETVLPALEQEGIYFHASDSWND HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCH EQLEWARRYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFVVELEGRDAFGRQAVMGIVQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC PRALPRVVRMPHALSGFEHGFVLLSSFMQRFVGELFPQLVVKSCNQFRITRNSELFVDED HHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC EITNLRVALQGELPARHLGNAVRLEVSADTPLHIVRRLLEESELGDKDCYRVAGSVNLVR CCCEEEEEEECCCCHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEE LMQIPDLVDRPDLKFTPFTASTPAVIANAPTMFDAIDAGDILLHHPYESFQPVLELLQQA EHHCCCCCCCCCCEECCCCCCCCCEEECCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHH ARDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVVELLARFDEETNINWASQLEA CCCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCHHHHHHH VGAHVVYGVVGHKCHAKMMLIVRRVVQAGKASLRRYVHLGTGNYHPRTARLYTDFGLMTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCC DQKICEDVHHVFQQLTGIGGELTLHELWQSPFTLHPRIIESIRAEIDNAQAGKRARIVAK CHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH MNALLEPSVIAALYEASQAGVKVDLIVRGVCALKPGVPGLSENITVRSIVGRFLEHHRIY HHHHHCHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCEEE YFHAGGAEDVYLSSADWMDRNLFRRVEVAFPIRERKLKRRVIAEGLSVCLGDNQSAWQMH EEECCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCCCEEEC SDGHYRRRRTGKTIRNAQLGLLAKFCS CCCCHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA