Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is nemA [H]
Identifier: 116689262
GI number: 116689262
Start: 1369929
End: 1371050
Strand: Reverse
Name: nemA [H]
Synonym: Bcen2424_1240
Alternate gene names: 116689262
Gene position: 1371050-1369929 (Counterclockwise)
Preceding gene: 116689273
Following gene: 116689261
Centisome position: 39.35
GC content: 67.91
Gene sequence:
>1122_bases ATGACGATCGACAACTCTCCTTCCGGCCGGGCGGCATCGACCCGCGCCACGTTGTTCGACCCGCTCGAATTCGGCGGGAT CACGCTCGGCAACCGCATCGTGATGGCACCGATGACGCGCAGCCGTGCCGGCGCCGGGGATGTACCCGGCGCGCTCAGCG CCACCTACTACGCCCAACGCGCGTCGGCTGGCCTGATCGTCACGGAGGGCACGCAGATTTCGCCGCTCGGCAAGGGCTAT CCGTTCACGCCGGGGATTTACAGCGATGCGCAAATCGACGGCTGGCAACGCGTGACCGACGCCGTGCATCGCGCAGGCGG CCGGATTTTCGTCCAGCTCGCGCACGTCGGCCGCATCGGCCATCCCGATCTGCAGCCCGACGGCGCCCTGCCCGTCGCGC CGTCGGCCATTCAGCCGGACGGACAGGCATTCACGCCGGCCGGACCGAAACCGCACCCCGTACCGCGCGCGCTCGAGACG AATGAAATACCAGGCATCGTCGAGCAATACTCGCATGCGGCGCAGGCCGCGTTGCGGGCAGGTTTCGACGGCGTCGAAAT CCACGCGGGGAACGGTTACCTGCTCGATCAGTTCCTGCGCGACGGTACGAACCGGCGCACGGACCCTTACGGCGGCACGA TCGACAACCGTATCCGGCTGCCGCTCGACGTCGTGCGGGCGGTCGGACGTGTCGTGAGTGCCGCGCGCGTGGGCGTCCGC ATTTCGCCGGTCACACCGCATTTCGGCGGCATCGCCGACAGTCAACCGCAGGCGCTGTTCGACCGGTTCGCCGACCGGCT GACCGGGCTCGCCGCCTATCTTCACGTCGTCGAAGGCATTCCGCAGGTCGCGGCCGATCAGGCACCGCCGTTCGACTACC GCGCATTGCGTCGTGCCTTCGGCGGGCTCTACATCGCGAACGGCGGCTACACGAAGGCGCGTGCGCAACAGGCACTCGAC GACGGCCATGCCGACCTCGTGTCGTTCGCCTATCCGTTCATCGCGAACCCGGACTTCGTGACGCGTCTTCGACACGATCG CCCGCTCGCGCACGCGGACATGTCCACCGCTTACGGCGGCGGTGAAGCCGGCTACACCGACTATCCGACGCTCGACGCGT AA
Upstream 100 bases:
>100_bases GCATTCTCCTAAATTCCTGTTCAGCAGCGCTCGACGCGTGCGCGCCGGGCATCCCGGATCGCGCGTCGACGCCCCATGAA CACGACAGGCAAATGGAATC
Downstream 100 bases:
>100_bases GCATCAATCGCCCGACAACAGGTCGGTCGCTCGACCGGATCGACGATCCACCCACTCATTCATTATGGATTCCATATGAT CAATTCGATCAACCGCGCAC
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTIDNSPSGRAASTRATLFDPLEFGGITLGNRIVMAPMTRSRAGAGDVPGALSATYYAQRASAGLIVTEGTQISPLGKGY PFTPGIYSDAQIDGWQRVTDAVHRAGGRIFVQLAHVGRIGHPDLQPDGALPVAPSAIQPDGQAFTPAGPKPHPVPRALET NEIPGIVEQYSHAAQAALRAGFDGVEIHAGNGYLLDQFLRDGTNRRTDPYGGTIDNRIRLPLDVVRAVGRVVSAARVGVR ISPVTPHFGGIADSQPQALFDRFADRLTGLAAYLHVVEGIPQVAADQAPPFDYRALRRAFGGLYIANGGYTKARAQQALD DGHADLVSFAYPFIANPDFVTRLRHDRPLAHADMSTAYGGGEAGYTDYPTLDA
Sequences:
>Translated_373_residues MTIDNSPSGRAASTRATLFDPLEFGGITLGNRIVMAPMTRSRAGAGDVPGALSATYYAQRASAGLIVTEGTQISPLGKGY PFTPGIYSDAQIDGWQRVTDAVHRAGGRIFVQLAHVGRIGHPDLQPDGALPVAPSAIQPDGQAFTPAGPKPHPVPRALET NEIPGIVEQYSHAAQAALRAGFDGVEIHAGNGYLLDQFLRDGTNRRTDPYGGTIDNRIRLPLDVVRAVGRVVSAARVGVR ISPVTPHFGGIADSQPQALFDRFADRLTGLAAYLHVVEGIPQVAADQAPPFDYRALRRAFGGLYIANGGYTKARAQQALD DGHADLVSFAYPFIANPDFVTRLRHDRPLAHADMSTAYGGGEAGYTDYPTLDA >Mature_372_residues TIDNSPSGRAASTRATLFDPLEFGGITLGNRIVMAPMTRSRAGAGDVPGALSATYYAQRASAGLIVTEGTQISPLGKGYP FTPGIYSDAQIDGWQRVTDAVHRAGGRIFVQLAHVGRIGHPDLQPDGALPVAPSAIQPDGQAFTPAGPKPHPVPRALETN EIPGIVEQYSHAAQAALRAGFDGVEIHAGNGYLLDQFLRDGTNRRTDPYGGTIDNRIRLPLDVVRAVGRVVSAARVGVRI SPVTPHFGGIADSQPQALFDRFADRLTGLAAYLHVVEGIPQVAADQAPPFDYRALRRAFGGLYIANGGYTKARAQQALDD GHADLVSFAYPFIANPDFVTRLRHDRPLAHADMSTAYGGGEAGYTDYPTLDA
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=369, Percent_Identity=44.4444444444444, Blast_Score=263, Evalue=1e-71, Organism=Escherichia coli, GI1789463, Length=362, Percent_Identity=31.4917127071823, Blast_Score=120, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17565138, Length=252, Percent_Identity=28.968253968254, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17559804, Length=214, Percent_Identity=28.5046728971963, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17559802, Length=211, Percent_Identity=29.8578199052133, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI72001454, Length=168, Percent_Identity=29.7619047619048, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17540738, Length=236, Percent_Identity=27.5423728813559, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17564188, Length=217, Percent_Identity=26.7281105990783, Blast_Score=76, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6325086, Length=384, Percent_Identity=34.6354166666667, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6321973, Length=384, Percent_Identity=34.375, Blast_Score=173, Evalue=5e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39601; Mature: 39470
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDNSPSGRAASTRATLFDPLEFGGITLGNRIVMAPMTRSRAGAGDVPGALSATYYAQR CCCCCCCCCCCCCCCHHHCCCHHHCCEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHH ASAGLIVTEGTQISPLGKGYPFTPGIYSDAQIDGWQRVTDAVHRAGGRIFVQLAHVGRIG CCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHCCCC HPDLQPDGALPVAPSAIQPDGQAFTPAGPKPHPVPRALETNEIPGIVEQYSHAAQAALRA CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GFDGVEIHAGNGYLLDQFLRDGTNRRTDPYGGTIDNRIRLPLDVVRAVGRVVSAARVGVR CCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCEE ISPVTPHFGGIADSQPQALFDRFADRLTGLAAYLHVVEGIPQVAADQAPPFDYRALRRAF EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHH GGLYIANGGYTKARAQQALDDGHADLVSFAYPFIANPDFVTRLRHDRPLAHADMSTAYGG CCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHCCCC GEAGYTDYPTLDA CCCCCCCCCCCCC >Mature Secondary Structure TIDNSPSGRAASTRATLFDPLEFGGITLGNRIVMAPMTRSRAGAGDVPGALSATYYAQR CCCCCCCCCCCCCCHHHCCCHHHCCEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHH ASAGLIVTEGTQISPLGKGYPFTPGIYSDAQIDGWQRVTDAVHRAGGRIFVQLAHVGRIG CCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHCCCC HPDLQPDGALPVAPSAIQPDGQAFTPAGPKPHPVPRALETNEIPGIVEQYSHAAQAALRA CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GFDGVEIHAGNGYLLDQFLRDGTNRRTDPYGGTIDNRIRLPLDVVRAVGRVVSAARVGVR CCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCEE ISPVTPHFGGIADSQPQALFDRFADRLTGLAAYLHVVEGIPQVAADQAPPFDYRALRRAF EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHH GGLYIANGGYTKARAQQALDDGHADLVSFAYPFIANPDFVTRLRHDRPLAHADMSTAYGG CCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHCCCC GEAGYTDYPTLDA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]