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The map label for this gene is ntrC [H]

Identifier: 116626825

GI number: 116626825

Start: 9777055

End: 9777903

Strand: Direct

Name: ntrC [H]

Synonym: Acid_7798

Alternate gene names: 116626825

Gene position: 9777055-9777903 (Clockwise)

Preceding gene: 116626817

Following gene: 116626826

Centisome position: 98.11

GC content: 58.3

Gene sequence:

>849_bases
ATGGCTTCGCGGACCGCCCTGGTAATCGGCGACGACGCTCAAATCAAAGCGATGGTTGCGCAGAGTCTAGCTCCAACGGA
GTGGACGCTCGAGACCGCCCCGAATAATGCGGCGGCACTGAAACTGGTTGAGGCCAGCCGGTTCGACCTGATCATCACCA
GCGAAAAGACTTCGGGTAAAGAGGATGTCGAGTTGTTGCGTGCAATCCGGCGAATACATCCGCACGCGCGGGTCATCATT
CTGACCGAGGAGACGACTCCGGCCGATGCGATCGCCGCGATGCGCGATCACGCTTTCAGTTATCTGTCGAAGCCATTCTC
GCTGACTTCGCTCGCTTCGGTGGTACAGGCCGCGGTGGAGGAACCCGGCTGGGACGATGGCATTAAGGTAGTTTCGGCTA
CGCCCGGTTGGATTCGCCTGGTAGTGCGGTGCGACGTGCAGACCGCCGAGCGGCTCATGCAGTTCTTTCAGGAAATCATC
GAGTTGCCGGCTGCCGAGAAAGAGGCGGTGGCGGTGGCGATTCGAGAGTTGCTGATGAACGCCATCGAACACGGTGGAAA
ATTCGATGCGGAGAAAACGGTGGAGGTCTCGTACCTGCGAACCCGCCGGGCCGTGTCCTGCAGGATCAAGGATCCGGGCA
AGGGCTTCTCGTTAGAGGCAATACCGCACGCGGCGGTGATGAATCCGCCAAATGACCCGGTGCGTCACATGAGTTACCGG
GAAGCGGAGAACCTGCGGCCGGGCGGCTTCGGTGTGCTGCTGGCCAAGAAAAACATTGACGAACTTCTCTATAACGAACA
AGGCAATGAGGTCGTGCTGGTGAAGTATATCGATCCTAAAGCAAAATGA

Upstream 100 bases:

>100_bases
AAATGAACCCGGGGGAAATCCTAAAGAAAAAGAAGCCCTGGGGAGATCGGGGGCATCCACTTCTACTCAAGGCGAATCAT
CTGTAAGAAGGGGATTTTTC

Downstream 100 bases:

>100_bases
GACTCGTCCGATTCGCGGTATTTTTGATACTGGCTTCACTCCCCGCTTTTGGGGCCGATGACCTGAAGGCGTTTCCCCCT
GCCGAGAAAGGGATGACGCG

Product: response regulator receiver protein

Products: NADP; 2 glutathione [C]

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MASRTALVIGDDAQIKAMVAQSLAPTEWTLETAPNNAAALKLVEASRFDLIITSEKTSGKEDVELLRAIRRIHPHARVII
LTEETTPADAIAAMRDHAFSYLSKPFSLTSLASVVQAAVEEPGWDDGIKVVSATPGWIRLVVRCDVQTAERLMQFFQEII
ELPAAEKEAVAVAIRELLMNAIEHGGKFDAEKTVEVSYLRTRRAVSCRIKDPGKGFSLEAIPHAAVMNPPNDPVRHMSYR
EAENLRPGGFGVLLAKKNIDELLYNEQGNEVVLVKYIDPKAK

Sequences:

>Translated_282_residues
MASRTALVIGDDAQIKAMVAQSLAPTEWTLETAPNNAAALKLVEASRFDLIITSEKTSGKEDVELLRAIRRIHPHARVII
LTEETTPADAIAAMRDHAFSYLSKPFSLTSLASVVQAAVEEPGWDDGIKVVSATPGWIRLVVRCDVQTAERLMQFFQEII
ELPAAEKEAVAVAIRELLMNAIEHGGKFDAEKTVEVSYLRTRRAVSCRIKDPGKGFSLEAIPHAAVMNPPNDPVRHMSYR
EAENLRPGGFGVLLAKKNIDELLYNEQGNEVVLVKYIDPKAK
>Mature_281_residues
ASRTALVIGDDAQIKAMVAQSLAPTEWTLETAPNNAAALKLVEASRFDLIITSEKTSGKEDVELLRAIRRIHPHARVIIL
TEETTPADAIAAMRDHAFSYLSKPFSLTSLASVVQAAVEEPGWDDGIKVVSATPGWIRLVVRCDVQTAERLMQFFQEIIE
LPAAEKEAVAVAIRELLMNAIEHGGKFDAEKTVEVSYLRTRRAVSCRIKDPGKGFSLEAIPHAAVMNPPNDPVRHMSYRE
AENLRPGGFGVLLAKKNIDELLYNEQGNEVVLVKYIDPKAK

Specific function: Member of the two-component regulatory system ntrB/ntrC involved in the activation of nitrogen assimilatory genes such as glnA. NtrC is phosphorylated by ntrB and interacts with sigma-54 [H]

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011006
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078
- InterPro:   IPR010114
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 31051; Mature: 30920

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRTALVIGDDAQIKAMVAQSLAPTEWTLETAPNNAAALKLVEASRFDLIITSEKTSGK
CCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCCCH
EDVELLRAIRRIHPHARVIILTEETTPADAIAAMRDHAFSYLSKPFSLTSLASVVQAAVE
HHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EPGWDDGIKVVSATPGWIRLVVRCDVQTAERLMQFFQEIIELPAAEKEAVAVAIRELLMN
CCCCCCCCEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIEHGGKFDAEKTVEVSYLRTRRAVSCRIKDPGKGFSLEAIPHAAVMNPPNDPVRHMSYR
HHHCCCCCCCCCEEEHHHHHHCCEEEEEECCCCCCCEEECCCCCEECCCCCCHHHHCCHH
EAENLRPGGFGVLLAKKNIDELLYNEQGNEVVLVKYIDPKAK
HHHCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
ASRTALVIGDDAQIKAMVAQSLAPTEWTLETAPNNAAALKLVEASRFDLIITSEKTSGK
CCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCCCH
EDVELLRAIRRIHPHARVIILTEETTPADAIAAMRDHAFSYLSKPFSLTSLASVVQAAVE
HHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EPGWDDGIKVVSATPGWIRLVVRCDVQTAERLMQFFQEIIELPAAEKEAVAVAIRELLMN
CCCCCCCCEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIEHGGKFDAEKTVEVSYLRTRRAVSCRIKDPGKGFSLEAIPHAAVMNPPNDPVRHMSYR
HHHCCCCCCCCCEEEHHHHHHCCEEEEEECCCCCCCEEECCCCCEECCCCCCHHHHCCHH
EAENLRPGGFGVLLAKKNIDELLYNEQGNEVVLVKYIDPKAK
HHHCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADPH2; oxidized glutathione [C]

Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7553451 [H]