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The map label for this gene is 116624423

Identifier: 116624423

GI number: 116624423

Start: 6703961

End: 6704818

Strand: Reverse

Name: 116624423

Synonym: Acid_5345

Alternate gene names: NA

Gene position: 6704818-6703961 (Counterclockwise)

Preceding gene: 116624425

Following gene: 116624422

Centisome position: 67.28

GC content: 65.15

Gene sequence:

>858_bases
TTGCGGACCACGAAGAACGCGATTGGTATAGTCTTGCTATTTTCCATCGGGGCGTTTGGACAGCCTCCTACAACGCCGTT
ACCGGCGCCGCAGGCAGGCCGCGGCGGAGGCGGACGCGGACCGGCCGCGGCTTATCCCCAACGACCACCGGCCGACCCCG
CCATGGTGGATCGCGGCAAAGCACTTTACGGCGTGAATTGCGCCTTTTGCCACGGCTCCGATGCCCGCGGCGGCGAAGGC
GGACCCAACCTGCTGCGCGCCCAGCTTGTCCTCGACGACCAGAACGGCGAGCTGATCGCTCCCGTCGTGCAGAACGGCCG
CCCCGATCGCGGCATGCCCGCGCTCAATCTCAGCAAACCGCAGGTCGCCGATGTCGCCGCGTTCATCCACAGTTTTCGCG
TCGGCGGCTATGACGTCTCGCGCATGAAGCCGCCCACCATTCTGGTGGGCAACGCCCAGGCCGGCGAAGCCTACTTCAAG
AACTCCTGCGCCTCCTGCCATTCCGTCACCGGCGATTTGAAGGGCATTGGCGCCAAATACGAAGATCCGAAGACTCTGCA
GAACACCTTCCTGCTCCCCGGCGGAGGACGCGGCGGACGCGGCGGCGGCAATGCTCCGCCGGTCACGGCCACCGTGACTC
CCACGTCAGGGCCGAAGGTCGAAGGCCGCCTCCTGCGCATCGACGATTTTCTGGTCACGCTCGCGCTCGCCGATGGTACC
CAGCGCTCCTTCCGCCGCGATGGCGATTCCCCCAGAGTCGATCTCCACGATCCGTTGGCGGGCCATCGCGCCCTACTGCC
CAAATACTCCGACAACGACATTCATAACCTGACCGCCTACCTGGTGACCGTGAAATGA

Upstream 100 bases:

>100_bases
CCACGGGCACAAGGAGATAAAGCAGGGCGGCGCGCATGCCTCATCCTACCAGTCCGGTATATACTAAATCCCGCTGGGTA
TCCACTCAAGGGGTAGCGAA

Downstream 100 bases:

>100_bases
TGACCGCCAAGAAGCTGTTCCTCACCGGCTCGCTCTGCCTGCTGCCCGTGCTCGCCACCGCGCAGGGCCTGGACCCCGCG
GCGATTCTCAAGCCTCTCGA

Product: class I cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRTTKNAIGIVLLFSIGAFGQPPTTPLPAPQAGRGGGGRGPAAAYPQRPPADPAMVDRGKALYGVNCAFCHGSDARGGEG
GPNLLRAQLVLDDQNGELIAPVVQNGRPDRGMPALNLSKPQVADVAAFIHSFRVGGYDVSRMKPPTILVGNAQAGEAYFK
NSCASCHSVTGDLKGIGAKYEDPKTLQNTFLLPGGGRGGRGGGNAPPVTATVTPTSGPKVEGRLLRIDDFLVTLALADGT
QRSFRRDGDSPRVDLHDPLAGHRALLPKYSDNDIHNLTAYLVTVK

Sequences:

>Translated_285_residues
MRTTKNAIGIVLLFSIGAFGQPPTTPLPAPQAGRGGGGRGPAAAYPQRPPADPAMVDRGKALYGVNCAFCHGSDARGGEG
GPNLLRAQLVLDDQNGELIAPVVQNGRPDRGMPALNLSKPQVADVAAFIHSFRVGGYDVSRMKPPTILVGNAQAGEAYFK
NSCASCHSVTGDLKGIGAKYEDPKTLQNTFLLPGGGRGGRGGGNAPPVTATVTPTSGPKVEGRLLRIDDFLVTLALADGT
QRSFRRDGDSPRVDLHDPLAGHRALLPKYSDNDIHNLTAYLVTVK
>Mature_285_residues
MRTTKNAIGIVLLFSIGAFGQPPTTPLPAPQAGRGGGGRGPAAAYPQRPPADPAMVDRGKALYGVNCAFCHGSDARGGEG
GPNLLRAQLVLDDQNGELIAPVVQNGRPDRGMPALNLSKPQVADVAAFIHSFRVGGYDVSRMKPPTILVGNAQAGEAYFK
NSCASCHSVTGDLKGIGAKYEDPKTLQNTFLLPGGGRGGRGGGNAPPVTATVTPTSGPKVEGRLLRIDDFLVTLALADGT
QRSFRRDGDSPRVDLHDPLAGHRALLPKYSDNDIHNLTAYLVTVK

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29764; Mature: 29764

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTKNAIGIVLLFSIGAFGQPPTTPLPAPQAGRGGGGRGPAAAYPQRPPADPAMVDRGK
CCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
ALYGVNCAFCHGSDARGGEGGPNLLRAQLVLDDQNGELIAPVVQNGRPDRGMPALNLSKP
EEEECEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEHHHHCCCCCCCCCCCCCCCC
QVADVAAFIHSFRVGGYDVSRMKPPTILVGNAQAGEAYFKNSCASCHSVTGDLKGIGAKY
HHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHCCCCCC
EDPKTLQNTFLLPGGGRGGRGGGNAPPVTATVTPTSGPKVEGRLLRIDDFLVTLALADGT
CCCCHHHHEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCC
QRSFRRDGDSPRVDLHDPLAGHRALLPKYSDNDIHNLTAYLVTVK
HHHHHCCCCCCEEECCCCCCCCCEECCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MRTTKNAIGIVLLFSIGAFGQPPTTPLPAPQAGRGGGGRGPAAAYPQRPPADPAMVDRGK
CCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
ALYGVNCAFCHGSDARGGEGGPNLLRAQLVLDDQNGELIAPVVQNGRPDRGMPALNLSKP
EEEECEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEHHHHCCCCCCCCCCCCCCCC
QVADVAAFIHSFRVGGYDVSRMKPPTILVGNAQAGEAYFKNSCASCHSVTGDLKGIGAKY
HHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHCCCCCC
EDPKTLQNTFLLPGGGRGGRGGGNAPPVTATVTPTSGPKVEGRLLRIDDFLVTLALADGT
CCCCHHHHEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCC
QRSFRRDGDSPRVDLHDPLAGHRALLPKYSDNDIHNLTAYLVTVK
HHHHHCCCCCCEEECCCCCCCCCEECCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA