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The map label for this gene is 116624341

Identifier: 116624341

GI number: 116624341

Start: 6595566

End: 6596960

Strand: Reverse

Name: 116624341

Synonym: Acid_5259

Alternate gene names: NA

Gene position: 6596960-6595566 (Counterclockwise)

Preceding gene: 116624347

Following gene: 116624340

Centisome position: 66.2

GC content: 62.44

Gene sequence:

>1395_bases
ATGTTACAAAAAGACGTCATTGACCAGCTCCGCGGCCAATTCCGCGGCGACTTGATCTCACCGGAAGACTCGCGCTATCC
GGACACCTGTAAGGTCTATAACGGCATGATCCACCGCAAGCCCGCCCTGTTCGCACAGTGCGCCGACGTCGCCGATGTCA
TGGCGGCCATCCGCTTCGGCCACGACCAGGGCGTGCGAGTTGCAATTCGCGGAGGCGGGCACAACGCCGGCGGCCTCGGC
GTTTGCGATGACGGACTGGTGATCGATCTTTGTAAGATCAGCTACGTCCACGTAGATCCGGCGGCGCGCACGGTGCGCGT
CGGCGGCGGCGCAAAGTGGGGCGACGTGGACCACGCCACCCACGCGTTCGGGCTCGCGGTTCCCTCGGGCATCCTCTCGA
CGACCGGAGTCGGCGGCCTCACCCTCGGAGGCGGCATGGGGCACCTCACGCGCAAATATGGCTTGACCATCGACAACCTG
CTGGCGGCGGACGTGGTGCTTGCCGATGGCAGCTTCGTGGTGGCCAGCGCCACCGAAAATCCTGACCTCTTTTGGGCGCT
GCGCGGTGGAGGCGGCAATTTCGGAGTGGTCACTTCTTTCCTGTTTCAGGCGCACCCGGTCAGCACCGTTTGTGCCGGTC
CCATGCTCTGGGAGCTGAAGGACGCCGTCGATATGATGAAGTGGTACCGAGAATTCATCGCGCACGCGCCGGAGACGATC
AACGGTTTCTTCGCGACCATGACGGTGCCGCCGGGACCTCCGTTCCCCGAGGCGCTCCACTTCAAGAAGATGTGCGCCAT
CGTGTGGTGCTACCCAGGCAGTATGGAGGACGCCAACAAACTACTGGAGCCGGTGCGCGCGTTCCGCAAACCCGCCTTCG
AGTTCTTCGTGCCGATGCCGTTCCCGATGCTGCAGAGCATGTTCGACGGCCTCTACCCGCCCGGCTACCAATGGTACTGG
AAGGGCGACTTCTTCAAGCAGTTGAGCGACGAAGCCATCGCTCAGCATCTGCGGTACGCCGAGCAGTTGCCCACTATGCA
TTCGTGCATGCACCTCTATCCGGTAAACGGAGCTGCCGCCAAAGTCGGCGCGGCCGATACGCCGTGGGCCTATCGCGACG
CGATGCTGAGCCAGGTGATCGTCGGGGTGGACCCGGATCCGGCGAACAAGGAGAAGATCACGGAGTGGGCGAAAGCCTAC
TTCGATGCCGTGCATCCCCTTGGCGCCGGGGGAGCATATGTAAACTTCATGATGGAAGAGGGCGAAGACCGCGTGCGCGC
CACTTACGGCAAGAACTACGATCGCCTGGCACGGGTTAAAGCCAGGTACGACCCCGAGAACTTCTTCAGTGTGAACCAGA
ACATCAAACCCCTGGTCGGGCAGGCCTCAGCGTAA

Upstream 100 bases:

>100_bases
CTGATATTCGCCGGGACGTGAGCGGGTTTGCCGCAACGTTACGCGTTCCAGTTAGGGGAATCGTCGCGCTGAATTTCTGA
TTCCAACGGGGAAATTACAA

Downstream 100 bases:

>100_bases
GCCATGCCGGTGTAAGATAGGATTTTGCATCCCACGGGAGAATGTTCTGACTATGCATCGATTTCGTTTCTTCGCTTTGT
GCCTGACCTTGGTCGCGGGC

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: 6-HDNO [H]

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MLQKDVIDQLRGQFRGDLISPEDSRYPDTCKVYNGMIHRKPALFAQCADVADVMAAIRFGHDQGVRVAIRGGGHNAGGLG
VCDDGLVIDLCKISYVHVDPAARTVRVGGGAKWGDVDHATHAFGLAVPSGILSTTGVGGLTLGGGMGHLTRKYGLTIDNL
LAADVVLADGSFVVASATENPDLFWALRGGGGNFGVVTSFLFQAHPVSTVCAGPMLWELKDAVDMMKWYREFIAHAPETI
NGFFATMTVPPGPPFPEALHFKKMCAIVWCYPGSMEDANKLLEPVRAFRKPAFEFFVPMPFPMLQSMFDGLYPPGYQWYW
KGDFFKQLSDEAIAQHLRYAEQLPTMHSCMHLYPVNGAAAKVGAADTPWAYRDAMLSQVIVGVDPDPANKEKITEWAKAY
FDAVHPLGAGGAYVNFMMEEGEDRVRATYGKNYDRLARVKARYDPENFFSVNQNIKPLVGQASA

Sequences:

>Translated_464_residues
MLQKDVIDQLRGQFRGDLISPEDSRYPDTCKVYNGMIHRKPALFAQCADVADVMAAIRFGHDQGVRVAIRGGGHNAGGLG
VCDDGLVIDLCKISYVHVDPAARTVRVGGGAKWGDVDHATHAFGLAVPSGILSTTGVGGLTLGGGMGHLTRKYGLTIDNL
LAADVVLADGSFVVASATENPDLFWALRGGGGNFGVVTSFLFQAHPVSTVCAGPMLWELKDAVDMMKWYREFIAHAPETI
NGFFATMTVPPGPPFPEALHFKKMCAIVWCYPGSMEDANKLLEPVRAFRKPAFEFFVPMPFPMLQSMFDGLYPPGYQWYW
KGDFFKQLSDEAIAQHLRYAEQLPTMHSCMHLYPVNGAAAKVGAADTPWAYRDAMLSQVIVGVDPDPANKEKITEWAKAY
FDAVHPLGAGGAYVNFMMEEGEDRVRATYGKNYDRLARVKARYDPENFFSVNQNIKPLVGQASA
>Mature_464_residues
MLQKDVIDQLRGQFRGDLISPEDSRYPDTCKVYNGMIHRKPALFAQCADVADVMAAIRFGHDQGVRVAIRGGGHNAGGLG
VCDDGLVIDLCKISYVHVDPAARTVRVGGGAKWGDVDHATHAFGLAVPSGILSTTGVGGLTLGGGMGHLTRKYGLTIDNL
LAADVVLADGSFVVASATENPDLFWALRGGGGNFGVVTSFLFQAHPVSTVCAGPMLWELKDAVDMMKWYREFIAHAPETI
NGFFATMTVPPGPPFPEALHFKKMCAIVWCYPGSMEDANKLLEPVRAFRKPAFEFFVPMPFPMLQSMFDGLYPPGYQWYW
KGDFFKQLSDEAIAQHLRYAEQLPTMHSCMHLYPVNGAAAKVGAADTPWAYRDAMLSQVIVGVDPDPANKEKITEWAKAY
FDAVHPLGAGGAYVNFMMEEGEDRVRATYGKNYDRLARVKARYDPENFFSVNQNIKPLVGQASA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: =1.5.3.6 [H]

Molecular weight: Translated: 50728; Mature: 50728

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00862 OX2_COVAL_FAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKDVIDQLRGQFRGDLISPEDSRYPDTCKVYNGMIHRKPALFAQCADVADVMAAIRFG
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCC
HDQGVRVAIRGGGHNAGGLGVCDDGLVIDLCKISYVHVDPAARTVRVGGGAKWGDVDHAT
CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCHHH
HAFGLAVPSGILSTTGVGGLTLGGGMGHLTRKYGLTIDNLLAADVVLADGSFVVASATEN
HHHHHHCCCCHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHEEEECCCEEEEECCCC
PDLFWALRGGGGNFGVVTSFLFQAHPVSTVCAGPMLWELKDAVDMMKWYREFIAHAPETI
CCEEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
NGFFATMTVPPGPPFPEALHFKKMCAIVWCYPGSMEDANKLLEPVRAFRKPAFEFFVPMP
CCEEEEEECCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCC
FPMLQSMFDGLYPPGYQWYWKGDFFKQLSDEAIAQHLRYAEQLPTMHSCMHLYPVNGAAA
HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCHH
KVGAADTPWAYRDAMLSQVIVGVDPDPANKEKITEWAKAYFDAVHPLGAGGAYVNFMMEE
CCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHC
GEDRVRATYGKNYDRLARVKARYDPENFFSVNQNIKPLVGQASA
CCCHHHHHHCCCHHHHHHHHHCCCCHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MLQKDVIDQLRGQFRGDLISPEDSRYPDTCKVYNGMIHRKPALFAQCADVADVMAAIRFG
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCC
HDQGVRVAIRGGGHNAGGLGVCDDGLVIDLCKISYVHVDPAARTVRVGGGAKWGDVDHAT
CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCHHH
HAFGLAVPSGILSTTGVGGLTLGGGMGHLTRKYGLTIDNLLAADVVLADGSFVVASATEN
HHHHHHCCCCHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHEEEECCCEEEEECCCC
PDLFWALRGGGGNFGVVTSFLFQAHPVSTVCAGPMLWELKDAVDMMKWYREFIAHAPETI
CCEEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
NGFFATMTVPPGPPFPEALHFKKMCAIVWCYPGSMEDANKLLEPVRAFRKPAFEFFVPMP
CCEEEEEECCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCC
FPMLQSMFDGLYPPGYQWYWKGDFFKQLSDEAIAQHLRYAEQLPTMHSCMHLYPVNGAAA
HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCHH
KVGAADTPWAYRDAMLSQVIVGVDPDPANKEKITEWAKAYFDAVHPLGAGGAYVNFMMEE
CCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHC
GEDRVRATYGKNYDRLARVKARYDPENFFSVNQNIKPLVGQASA
CCCHHHHHHCCCHHHHHHHHHCCCCHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3622516; 2680607; 2115879 [H]