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The map label for this gene is 116624340

Identifier: 116624340

GI number: 116624340

Start: 6595187

End: 6595513

Strand: Reverse

Name: 116624340

Synonym: Acid_5258

Alternate gene names: NA

Gene position: 6595513-6595187 (Counterclockwise)

Preceding gene: 116624341

Following gene: 116624337

Centisome position: 66.18

GC content: 56.57

Gene sequence:

>327_bases
ATGCATCGATTTCGTTTCTTCGCTTTGTGCCTGACCTTGGTCGCGGGCTCCATCGGAATGCGTGCCGCCGGTAAGGGGGA
TGCTGCCAAGGGCAAGGTCGTCTTCGAACAATGCGCCGTCTGCCACAATCCAGACAGCGACGAAAAGAAGATGGGCCCTG
GACTGAAAGGGCTCTTTAAGAAGGAGAAGATGACCAACGGCAAAAAGCCGAACGACGCCACCGTTCGCGCCCGCGTGGAT
GAGGGCGGAAACGGAATGCCGGCTTATAAGGACATGCTGAGCGACGCGGAAAAAGACGACCTCATCGCTTACCTGAAAAC
CCTGTAG

Upstream 100 bases:

>100_bases
AGTGTGAACCAGAACATCAAACCCCTGGTCGGGCAGGCCTCAGCGTAAGCCATGCCGGTGTAAGATAGGATTTTGCATCC
CACGGGAGAATGTTCTGACT

Downstream 100 bases:

>100_bases
GACAGGCCTCTCCGGCCTGTCCCACTGTTTGGGTTCCTAACCCTTCGCCAGAACTTCCAGCGCCTTCTTCACCACCGCGT
CGTCTTCGACCTTTTTCTCA

Product: class I cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MHRFRFFALCLTLVAGSIGMRAAGKGDAAKGKVVFEQCAVCHNPDSDEKKMGPGLKGLFKKEKMTNGKKPNDATVRARVD
EGGNGMPAYKDMLSDAEKDDLIAYLKTL

Sequences:

>Translated_108_residues
MHRFRFFALCLTLVAGSIGMRAAGKGDAAKGKVVFEQCAVCHNPDSDEKKMGPGLKGLFKKEKMTNGKKPNDATVRARVD
EGGNGMPAYKDMLSDAEKDDLIAYLKTL
>Mature_108_residues
MHRFRFFALCLTLVAGSIGMRAAGKGDAAKGKVVFEQCAVCHNPDSDEKKMGPGLKGLFKKEKMTNGKKPNDATVRARVD
EGGNGMPAYKDMLSDAEKDDLIAYLKTL

Specific function: Unknown

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11724; Mature: 11724

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRFRFFALCLTLVAGSIGMRAAGKGDAAKGKVVFEQCAVCHNPDSDEKKMGPGLKGLFK
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHH
KEKMTNGKKPNDATVRARVDEGGNGMPAYKDMLSDAEKDDLIAYLKTL
HHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MHRFRFFALCLTLVAGSIGMRAAGKGDAAKGKVVFEQCAVCHNPDSDEKKMGPGLKGLFK
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHH
KEKMTNGKKPNDATVRARVDEGGNGMPAYKDMLSDAEKDDLIAYLKTL
HHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA