Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622341
Identifier: 116622341
GI number: 116622341
Start: 4093536
End: 4095755
Strand: Reverse
Name: 116622341
Synonym: Acid_3235
Alternate gene names: NA
Gene position: 4095755-4093536 (Counterclockwise)
Preceding gene: 116622344
Following gene: 116622340
Centisome position: 41.1
GC content: 61.17
Gene sequence:
>2220_bases ATGCACAAGCTTCTGGTCTGCTTCCTTCTTGTCGGCAGCCTTGCCGCCGCTGAGCGCGATCCGCTGGCATCCGTCAATCC GCTGATTGGAACGCAGAAGAGCAAAATCGGTTATGGCGGAACGATGCCGTTTGTCTCGCCTCCGTTCGCAATGACGAACT GGACGGCGCAGACACGTCAGAACAAGATCAGCATCACGTCCTACGAGTACGACGATAAGACCATATCCGGCTTCACCGGC ACCCATCAGCCCGCGATCTGGATGGGGGACTACGGCTACGTCACGCTGATGCCGCAGGTGGGCGCACTCCGGACCACGCC GGAAGGGCGCCAACTGGCTTTTTCGCACAGCGACGAGACGGCCAAACCGGATTACTATGCGGTGGGGCTGCGCAGCGCGG ACGGTGCGCGCATCGGCGCCGAGATGACGGCCACGGAGCGATGCGCATTGCTTCGCTTCCGGTTTCCGAGCAGCGGCGTG GCGCGCGTGCTGGTCGAAATGTCGCGGCCGGGCGTGCCGGGCTTTGCCGCAGTCGATCAGAAAAGCGGCGAGATCACGGG TTTCAATCCCCACCGCATGGATGCGCACCTGGGGCCGCATAAGCTGCCGAACTTCAAAGGGTACTTCGTGGTTCAGTTCC GGCAGGCTCCACAGGACGCCGGAACCTACGGGCTTGAGAAAGAGGATGCGTCCACGAGCAGAGGCGCATTCGCGGAGTTT CGCCCGGGTGAGCTCGTGGAAGTCCGTGTCGGCACGTCGTTCCTCAGTATCGACCAGGCGCGCGCGAACCTGCGGCAGGA GATCCCGGAATGGAATTTCGATGGGGTGCGCGCGAAGCTGCATTCGGCCTGGGCGGCGCAACTGGGCCGTCTCGAATGGG AAGGCGCCAGCGATCGCGAAAGAACCAGGCTCTACACGGCGCTTTACCACTCGCTGCTCTATCCGCGAGTTTTTTCGGAA TACGGCCACTACTACAGCGCCTTCGACGATCAGGTACACCCCGGCGAGAGTTACACCGCTTATTCGATCTGGGACACGTT CCGCGCCGAAAACAGCCTGCTCACGCTGGTGGCTCCGGAGCGCATCGACGGAATGATCACGGCTCTGCTTCAAGATTTCC GGGAGGGCGGATGGATGCCGAAATGGCCGAACCCGTCTTATACGAATATCATGATCGGCACGCACGCCGACTCACTGGTC GCGGAGGCGATCCGCAAAGGGTTCCACGGCTTCGATCGCGAGCTTGTCTGGAAGGCTGTGTATCAAGACGCGATGGTTCC ACCCGGCGGAGATACGTCGCGACGCTGGCTGGATCGCGAGGAAGGGACACCTTACGAGGCTCGCGCGGGGCTGACATACT ACAAGCAGCTGGGTTACATTCCCACCGATAAGATTGACGAAGCCGCGTCGCGCACGCTGGAGGACAGTTACGACGACTGG TGCGTGGCACAGGTCGCGAAGGCTTTAGGCCGCGATGATTACCGGTTCTTCCTGCACCGTTCGCTGAACGATCGCAACCT GTTCAACCCGGCGCTCGGGCTCATGAACGGCAAGACATCGGATGGCAAGTGGGCTCCGATCGGCGGTTCGCAGGATACGC AGGAGAATCGTTCGGTCGCGGGTTGGACGGAAGGCGATGCGTGGGCTTACACGTGGTCGCCGCTGCACGACCAGACGGGG CTGATCCAACTTATGGGCGGCCGGGAACAGTACGCCGCAAAGCTGGATGCTCACATCAGCGGCGGACACAACGTACACAG CAACGAGCCGAGCCACCACTACGCCTACCTGTACGACTTTGCCGGCCAGCCGTGGAAGACGCAGGCCAAGGTTCGCGAGA TCGCCGCTGCCGAATATGGCTATGATGCGGGCGGTCTGGATGGCGATGACGATTGCGGCCAGATGTCCGCGTGGCTGCTG TTTAGTGCGATGGGCTTCTATCCGGTGAATCCGGCGAGCGGGGAATATATGATTGGCAGCCCGATGTTTCGCGGGGTGAG CATCCGGCTGCAAAATGGAAAGACCTTCCGGGTGATCGCGGAGAATGTCTCGGAGAGGAATCTATATGTGCAATCCGCGA CGCTTGATGGGAAGGCGTTGAATGATCCGGTGATTACGTGGGAGCAGATTCAGTCAGGGGCGACTTTGAAGTTCAGAATG GGGCCAAAGGCGTCGCGATGGGGAGGCGAGTGGCGGCCTGCGCCGATTGAGGGGAAGTAG
Upstream 100 bases:
>100_bases ATAACAACGCGAAGATAAATTTCAAGTTCGTGTGATTTGCAGATTGCAATAGGATAAACAGCTTAAATTAGTGAACAGGC CGGGAGGCCTGTCCTATTCC
Downstream 100 bases:
>100_bases GTGGAGTGATTCTACTTTTCGCCCACTGCTTCCTTGACGAGTTACCCCAGTCTGATGAAGGCCTCAACTCACCCACAAGA TCCCGCACGAGCTTCACTTA
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Glycosyltransferase; Lipoprotein; Mannosidase
Number of amino acids: Translated: 739; Mature: 739
Protein sequence:
>739_residues MHKLLVCFLLVGSLAAAERDPLASVNPLIGTQKSKIGYGGTMPFVSPPFAMTNWTAQTRQNKISITSYEYDDKTISGFTG THQPAIWMGDYGYVTLMPQVGALRTTPEGRQLAFSHSDETAKPDYYAVGLRSADGARIGAEMTATERCALLRFRFPSSGV ARVLVEMSRPGVPGFAAVDQKSGEITGFNPHRMDAHLGPHKLPNFKGYFVVQFRQAPQDAGTYGLEKEDASTSRGAFAEF RPGELVEVRVGTSFLSIDQARANLRQEIPEWNFDGVRAKLHSAWAAQLGRLEWEGASDRERTRLYTALYHSLLYPRVFSE YGHYYSAFDDQVHPGESYTAYSIWDTFRAENSLLTLVAPERIDGMITALLQDFREGGWMPKWPNPSYTNIMIGTHADSLV AEAIRKGFHGFDRELVWKAVYQDAMVPPGGDTSRRWLDREEGTPYEARAGLTYYKQLGYIPTDKIDEAASRTLEDSYDDW CVAQVAKALGRDDYRFFLHRSLNDRNLFNPALGLMNGKTSDGKWAPIGGSQDTQENRSVAGWTEGDAWAYTWSPLHDQTG LIQLMGGREQYAAKLDAHISGGHNVHSNEPSHHYAYLYDFAGQPWKTQAKVREIAAAEYGYDAGGLDGDDDCGQMSAWLL FSAMGFYPVNPASGEYMIGSPMFRGVSIRLQNGKTFRVIAENVSERNLYVQSATLDGKALNDPVITWEQIQSGATLKFRM GPKASRWGGEWRPAPIEGK
Sequences:
>Translated_739_residues MHKLLVCFLLVGSLAAAERDPLASVNPLIGTQKSKIGYGGTMPFVSPPFAMTNWTAQTRQNKISITSYEYDDKTISGFTG THQPAIWMGDYGYVTLMPQVGALRTTPEGRQLAFSHSDETAKPDYYAVGLRSADGARIGAEMTATERCALLRFRFPSSGV ARVLVEMSRPGVPGFAAVDQKSGEITGFNPHRMDAHLGPHKLPNFKGYFVVQFRQAPQDAGTYGLEKEDASTSRGAFAEF RPGELVEVRVGTSFLSIDQARANLRQEIPEWNFDGVRAKLHSAWAAQLGRLEWEGASDRERTRLYTALYHSLLYPRVFSE YGHYYSAFDDQVHPGESYTAYSIWDTFRAENSLLTLVAPERIDGMITALLQDFREGGWMPKWPNPSYTNIMIGTHADSLV AEAIRKGFHGFDRELVWKAVYQDAMVPPGGDTSRRWLDREEGTPYEARAGLTYYKQLGYIPTDKIDEAASRTLEDSYDDW CVAQVAKALGRDDYRFFLHRSLNDRNLFNPALGLMNGKTSDGKWAPIGGSQDTQENRSVAGWTEGDAWAYTWSPLHDQTG LIQLMGGREQYAAKLDAHISGGHNVHSNEPSHHYAYLYDFAGQPWKTQAKVREIAAAEYGYDAGGLDGDDDCGQMSAWLL FSAMGFYPVNPASGEYMIGSPMFRGVSIRLQNGKTFRVIAENVSERNLYVQSATLDGKALNDPVITWEQIQSGATLKFRM GPKASRWGGEWRPAPIEGK >Mature_739_residues MHKLLVCFLLVGSLAAAERDPLASVNPLIGTQKSKIGYGGTMPFVSPPFAMTNWTAQTRQNKISITSYEYDDKTISGFTG THQPAIWMGDYGYVTLMPQVGALRTTPEGRQLAFSHSDETAKPDYYAVGLRSADGARIGAEMTATERCALLRFRFPSSGV ARVLVEMSRPGVPGFAAVDQKSGEITGFNPHRMDAHLGPHKLPNFKGYFVVQFRQAPQDAGTYGLEKEDASTSRGAFAEF RPGELVEVRVGTSFLSIDQARANLRQEIPEWNFDGVRAKLHSAWAAQLGRLEWEGASDRERTRLYTALYHSLLYPRVFSE YGHYYSAFDDQVHPGESYTAYSIWDTFRAENSLLTLVAPERIDGMITALLQDFREGGWMPKWPNPSYTNIMIGTHADSLV AEAIRKGFHGFDRELVWKAVYQDAMVPPGGDTSRRWLDREEGTPYEARAGLTYYKQLGYIPTDKIDEAASRTLEDSYDDW CVAQVAKALGRDDYRFFLHRSLNDRNLFNPALGLMNGKTSDGKWAPIGGSQDTQENRSVAGWTEGDAWAYTWSPLHDQTG LIQLMGGREQYAAKLDAHISGGHNVHSNEPSHHYAYLYDFAGQPWKTQAKVREIAAAEYGYDAGGLDGDDDCGQMSAWLL FSAMGFYPVNPASGEYMIGSPMFRGVSIRLQNGKTFRVIAENVSERNLYVQSATLDGKALNDPVITWEQIQSGATLKFRM GPKASRWGGEWRPAPIEGK
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82307; Mature: 82307
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKLLVCFLLVGSLAAAERDPLASVNPLIGTQKSKIGYGGTMPFVSPPFAMTNWTAQTRQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC NKISITSYEYDDKTISGFTGTHQPAIWMGDYGYVTLMPQVGALRTTPEGRQLAFSHSDET CEEEEEEEECCCCEECCCCCCCCCEEEECCCCEEEECCCCCCEECCCCCCEEEEECCCCC AKPDYYAVGLRSADGARIGAEMTATERCALLRFRFPSSGVARVLVEMSRPGVPGFAAVDQ CCCCEEEEEECCCCCCCCCCCCCHHHCEEEEEEECCCCCHHHHHHHHCCCCCCCEEEECC KSGEITGFNPHRMDAHLGPHKLPNFKGYFVVQFRQAPQDAGTYGLEKEDASTSRGAFAEF CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEC RPGELVEVRVGTSFLSIDQARANLRQEIPEWNFDGVRAKLHSAWAAQLGRLEWEGASDRE CCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCHH RTRLYTALYHSLLYPRVFSEYGHYYSAFDDQVHPGESYTAYSIWDTFRAENSLLTLVAPE HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEHHHHHCCCCCEEEEECCH RIDGMITALLQDFREGGWMPKWPNPSYTNIMIGTHADSLVAEAIRKGFHGFDRELVWKAV HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH YQDAMVPPGGDTSRRWLDREEGTPYEARAGLTYYKQLGYIPTDKIDEAASRTLEDSYDDW HHHCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH CVAQVAKALGRDDYRFFLHRSLNDRNLFNPALGLMNGKTSDGKWAPIGGSQDTQENRSVA HHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC GWTEGDAWAYTWSPLHDQTGLIQLMGGREQYAAKLDAHISGGHNVHSNEPSHHYAYLYDF CCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEC AGQPWKTQAKVREIAAAEYGYDAGGLDGDDDCGQMSAWLLFSAMGFYPVNPASGEYMIGS CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEECC PMFRGVSIRLQNGKTFRVIAENVSERNLYVQSATLDGKALNDPVITWEQIQSGATLKFRM CCCCCEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEHHHHCCCCEEEEEE GPKASRWGGEWRPAPIEGK CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHKLLVCFLLVGSLAAAERDPLASVNPLIGTQKSKIGYGGTMPFVSPPFAMTNWTAQTRQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC NKISITSYEYDDKTISGFTGTHQPAIWMGDYGYVTLMPQVGALRTTPEGRQLAFSHSDET CEEEEEEEECCCCEECCCCCCCCCEEEECCCCEEEECCCCCCEECCCCCCEEEEECCCCC AKPDYYAVGLRSADGARIGAEMTATERCALLRFRFPSSGVARVLVEMSRPGVPGFAAVDQ CCCCEEEEEECCCCCCCCCCCCCHHHCEEEEEEECCCCCHHHHHHHHCCCCCCCEEEECC KSGEITGFNPHRMDAHLGPHKLPNFKGYFVVQFRQAPQDAGTYGLEKEDASTSRGAFAEF CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEC RPGELVEVRVGTSFLSIDQARANLRQEIPEWNFDGVRAKLHSAWAAQLGRLEWEGASDRE CCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCHH RTRLYTALYHSLLYPRVFSEYGHYYSAFDDQVHPGESYTAYSIWDTFRAENSLLTLVAPE HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEHHHHHCCCCCEEEEECCH RIDGMITALLQDFREGGWMPKWPNPSYTNIMIGTHADSLVAEAIRKGFHGFDRELVWKAV HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH YQDAMVPPGGDTSRRWLDREEGTPYEARAGLTYYKQLGYIPTDKIDEAASRTLEDSYDDW HHHCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH CVAQVAKALGRDDYRFFLHRSLNDRNLFNPALGLMNGKTSDGKWAPIGGSQDTQENRSVA HHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC GWTEGDAWAYTWSPLHDQTGLIQLMGGREQYAAKLDAHISGGHNVHSNEPSHHYAYLYDF CCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEC AGQPWKTQAKVREIAAAEYGYDAGGLDGDDDCGQMSAWLLFSAMGFYPVNPASGEYMIGS CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEECC PMFRGVSIRLQNGKTFRVIAENVSERNLYVQSATLDGKALNDPVITWEQIQSGATLKFRM CCCCCEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEHHHHCCCCEEEEEE GPKASRWGGEWRPAPIEGK CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA