Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is cya3 [H]
Identifier: 116622331
GI number: 116622331
Start: 4080692
End: 4082509
Strand: Reverse
Name: cya3 [H]
Synonym: Acid_3225
Alternate gene names: 116622331
Gene position: 4082509-4080692 (Counterclockwise)
Preceding gene: 116622336
Following gene: 116622330
Centisome position: 40.97
GC content: 60.84
Gene sequence:
>1818_bases GTGGTCGCACTGGAGCCGAAGGCCGTGGAAGTACTGCTGATTCTGGTCGAAAAGCGCGGGGAGGTGGTGGCTCGCCAGGA CCTGATGAGCGCCGTATGGCCCGACACCTTTGTGGAAGAGAGCAATCTCTCCTCAAACATCTCAATCCTTCGCAGGCAGC TGGGCACGCCGCCGGACGGAGGAGATTACATTCAAACGATTCCCAAGAGAGGCTACCGGTTCGTGGCTGCGGTAAACCAA GCTGGAAGCGAGCTGGAAGCGGCAACGGCCGAAGTAAGTGAAATCGTCTCAGCAGAAGCAACGACAACAGTGAGAGTACG GAAACTTACTATCCGTCCACGAGTTATCCTGACCTCCGCGGCGGGACTTTTGGTGGTGGTGCTGCCACTGTTGTATCTGG GCTTGTGGCACGGGAGGCTACCGGGTTTCGCGGCTGAGCCGCATATCGGAGCGATCGCGGTGCTGCCCTTAGAGAATCTC TCGGGAGACCCGGCCGAGGAATACTTTGCGGACGGAATGACCGAAGCCCTGACTGCCGACATGGCTCAAATCGGGGCACT GCGGGTGATTGCCCGCGCCTCGGTGATGCAATACAAGGGAACGAAGCAGCCGTTGGCGCAGATCGCCGAGCGATTGCACG TGGAAGCGGTGGTGTCGGGGGCGGTGCTTCGTTCCGGGCAACGGGTGCGAATTACGGCCGCCTTGATCCGCGCCGCGACC GGCCAGCAACTCTGGGCGCGAACCTACGAGCGAAGCCTGGGCGACGTTCTGGACTTACAAAACGAGGTGGCTCGAGCGAT TGCCGCGGAGGTGCAGGCCAAGCTAACGGCGCAGGAGCAGATCCGGTTGGCGCGCAGCCGGCCGGTCAAGGCGGACGCCT ATGACGCGTACCTGAAGGGCCGCTATTATTACAACCAGTTCACGGTTGACGGATTCTCCAAGAGTATCGAGCACTTCGAG CGGGCGATCAAGCTGGATCCAAACTACGCCTCCGCCTATGCAGGGCTGGCGGATGCCCTGGCGAGCCTGGAGCAGATCGG CGCCGCCCGGTCCGAGGACGTTCATCCGCGGGCACTGGAGGCAGCGAACAAGGCTCTGGCGATGGATGATGCCCTACCCG AAGCTCATGCCGCGATGGCGTCCGTGAGAGCCAATGACTGGGAGAGGTCCGCAGCCGAGAGGGAAGCAAAAAAGGCGATC GAGCTCAATCCCGGATTTGCGTTGGCGCACTTATACTACAGCAACATGCTGCGTCATCTGGGAAGGAGGGAGGAGAGCAT CGCCGAAGCCAGGCGGGCGCTCGAGTTGGACCCGCTTTCCCCGCTCACGAACGAAGAGCTGGCGGATGCGCAGTTGAGCG CGCGTCAATACGGCGCGGCCATCGAACAGTATCAGAAGACGCTGGAACTCTATCCGAATCAGCCCGCTCCCCGAGACTCA CTCGGGTGGGCGTACGTTTATCAGCGGATGTATGACAAAGGGCTGGAAGAGATCCGCAAAAGCATTGCGCTTTACGGGGA AGACGCCAGCCTTTCGCCGGAAATCGCGTTCATCTACGGCATAACGGGCAGAAAGGACGAAGCGCGGATGATCCTCAGCC GGTTGCTCAGCGCATCGAAGGCGGCGCCTATCGCGGCCCATCACTTTGCGTTGATTTACACCGGCCTGGACGAAAAGACC GAAGCGTTCGCGTGGCTGGAAAAAGCCTTCGAAGAGCACTCCCCCATGATGGCGTGGCTCGGGGTTGATCCGAGATTCGA CGGCCTGCGCCAGGAGCCGAGATTCCAGGATCTTATTCGACGGGTCGGGCTGCCTTAG
Upstream 100 bases:
>100_bases CACACACGAGGTAGACCCGACGAAACAGCCGAGAGTCATTTACGAATTCGGCCAGTTCCGGCTCGATCGGGAGTCGCATC TTCTGGTTCGCGGCGACCAG
Downstream 100 bases:
>100_bases GGCGTTGAGGTTCACCTTGACACACCCGGTGCCTCAGAGGATAATGAACCGCACTCTTGTTCGGTCTTGTAGTTAGTCGC CGCGGTGAGAAATCATGCGA
Product: transcriptional regulator domain-containing protein
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MVALEPKAVEVLLILVEKRGEVVARQDLMSAVWPDTFVEESNLSSNISILRRQLGTPPDGGDYIQTIPKRGYRFVAAVNQ AGSELEAATAEVSEIVSAEATTTVRVRKLTIRPRVILTSAAGLLVVVLPLLYLGLWHGRLPGFAAEPHIGAIAVLPLENL SGDPAEEYFADGMTEALTADMAQIGALRVIARASVMQYKGTKQPLAQIAERLHVEAVVSGAVLRSGQRVRITAALIRAAT GQQLWARTYERSLGDVLDLQNEVARAIAAEVQAKLTAQEQIRLARSRPVKADAYDAYLKGRYYYNQFTVDGFSKSIEHFE RAIKLDPNYASAYAGLADALASLEQIGAARSEDVHPRALEAANKALAMDDALPEAHAAMASVRANDWERSAAEREAKKAI ELNPGFALAHLYYSNMLRHLGRREESIAEARRALELDPLSPLTNEELADAQLSARQYGAAIEQYQKTLELYPNQPAPRDS LGWAYVYQRMYDKGLEEIRKSIALYGEDASLSPEIAFIYGITGRKDEARMILSRLLSASKAAPIAAHHFALIYTGLDEKT EAFAWLEKAFEEHSPMMAWLGVDPRFDGLRQEPRFQDLIRRVGLP
Sequences:
>Translated_605_residues MVALEPKAVEVLLILVEKRGEVVARQDLMSAVWPDTFVEESNLSSNISILRRQLGTPPDGGDYIQTIPKRGYRFVAAVNQ AGSELEAATAEVSEIVSAEATTTVRVRKLTIRPRVILTSAAGLLVVVLPLLYLGLWHGRLPGFAAEPHIGAIAVLPLENL SGDPAEEYFADGMTEALTADMAQIGALRVIARASVMQYKGTKQPLAQIAERLHVEAVVSGAVLRSGQRVRITAALIRAAT GQQLWARTYERSLGDVLDLQNEVARAIAAEVQAKLTAQEQIRLARSRPVKADAYDAYLKGRYYYNQFTVDGFSKSIEHFE RAIKLDPNYASAYAGLADALASLEQIGAARSEDVHPRALEAANKALAMDDALPEAHAAMASVRANDWERSAAEREAKKAI ELNPGFALAHLYYSNMLRHLGRREESIAEARRALELDPLSPLTNEELADAQLSARQYGAAIEQYQKTLELYPNQPAPRDS LGWAYVYQRMYDKGLEEIRKSIALYGEDASLSPEIAFIYGITGRKDEARMILSRLLSASKAAPIAAHHFALIYTGLDEKT EAFAWLEKAFEEHSPMMAWLGVDPRFDGLRQEPRFQDLIRRVGLP >Mature_605_residues MVALEPKAVEVLLILVEKRGEVVARQDLMSAVWPDTFVEESNLSSNISILRRQLGTPPDGGDYIQTIPKRGYRFVAAVNQ AGSELEAATAEVSEIVSAEATTTVRVRKLTIRPRVILTSAAGLLVVVLPLLYLGLWHGRLPGFAAEPHIGAIAVLPLENL SGDPAEEYFADGMTEALTADMAQIGALRVIARASVMQYKGTKQPLAQIAERLHVEAVVSGAVLRSGQRVRITAALIRAAT GQQLWARTYERSLGDVLDLQNEVARAIAAEVQAKLTAQEQIRLARSRPVKADAYDAYLKGRYYYNQFTVDGFSKSIEHFE RAIKLDPNYASAYAGLADALASLEQIGAARSEDVHPRALEAANKALAMDDALPEAHAAMASVRANDWERSAAEREAKKAI ELNPGFALAHLYYSNMLRHLGRREESIAEARRALELDPLSPLTNEELADAQLSARQYGAAIEQYQKTLELYPNQPAPRDS LGWAYVYQRMYDKGLEEIRKSIALYGEDASLSPEIAFIYGITGRKDEARMILSRLLSASKAAPIAAHHFALIYTGLDEKT EAFAWLEKAFEEHSPMMAWLGVDPRFDGLRQEPRFQDLIRRVGLP
Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
Organism=Caenorhabditis elegans, GI115532692, Length=210, Percent_Identity=30, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI115532690, Length=210, Percent_Identity=30, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 66716; Mature: 66716
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALEPKAVEVLLILVEKRGEVVARQDLMSAVWPDTFVEESNLSSNISILRRQLGTPPDG CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCCC GDYIQTIPKRGYRFVAAVNQAGSELEAATAEVSEIVSAEATTTVRVRKLTIRPRVILTSA CHHHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHHCCCHHEEEEEEEEECCEEEEEHH AGLLVVVLPLLYLGLWHGRLPGFAAEPHIGAIAVLPLENLSGDPAEEYFADGMTEALTAD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHH MAQIGALRVIARASVMQYKGTKQPLAQIAERLHVEAVVSGAVLRSGQRVRITAALIRAAT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHC GQQLWARTYERSLGDVLDLQNEVARAIAAEVQAKLTAQEQIRLARSRPVKADAYDAYLKG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC RYYYNQFTVDGFSKSIEHFERAIKLDPNYASAYAGLADALASLEQIGAARSEDVHPRALE EEEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AANKALAMDDALPEAHAAMASVRANDWERSAAEREAKKAIELNPGFALAHLYYSNMLRHL HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH GRREESIAEARRALELDPLSPLTNEELADAQLSARQYGAAIEQYQKTLELYPNQPAPRDS CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LGWAYVYQRMYDKGLEEIRKSIALYGEDASLSPEIAFIYGITGRKDEARMILSRLLSASK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC AAPIAAHHFALIYTGLDEKTEAFAWLEKAFEEHSPMMAWLGVDPRFDGLRQEPRFQDLIR CCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHH RVGLP HHCCC >Mature Secondary Structure MVALEPKAVEVLLILVEKRGEVVARQDLMSAVWPDTFVEESNLSSNISILRRQLGTPPDG CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCCC GDYIQTIPKRGYRFVAAVNQAGSELEAATAEVSEIVSAEATTTVRVRKLTIRPRVILTSA CHHHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHHCCCHHEEEEEEEEECCEEEEEHH AGLLVVVLPLLYLGLWHGRLPGFAAEPHIGAIAVLPLENLSGDPAEEYFADGMTEALTAD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHH MAQIGALRVIARASVMQYKGTKQPLAQIAERLHVEAVVSGAVLRSGQRVRITAALIRAAT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHC GQQLWARTYERSLGDVLDLQNEVARAIAAEVQAKLTAQEQIRLARSRPVKADAYDAYLKG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC RYYYNQFTVDGFSKSIEHFERAIKLDPNYASAYAGLADALASLEQIGAARSEDVHPRALE EEEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AANKALAMDDALPEAHAAMASVRANDWERSAAEREAKKAIELNPGFALAHLYYSNMLRHL HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH GRREESIAEARRALELDPLSPLTNEELADAQLSARQYGAAIEQYQKTLELYPNQPAPRDS CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LGWAYVYQRMYDKGLEEIRKSIALYGEDASLSPEIAFIYGITGRKDEARMILSRLLSASK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC AAPIAAHHFALIYTGLDEKTEAFAWLEKAFEEHSPMMAWLGVDPRFDGLRQEPRFQDLIR CCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHH RVGLP HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]