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The map label for this gene is glnR [H]

Identifier: 116622336

GI number: 116622336

Start: 4086549

End: 4088513

Strand: Reverse

Name: glnR [H]

Synonym: Acid_3230

Alternate gene names: 116622336

Gene position: 4088513-4086549 (Counterclockwise)

Preceding gene: 116622339

Following gene: 116622331

Centisome position: 41.03

GC content: 62.24

Gene sequence:

>1965_bases
ATGAGTACTATCAAAAATAGTCTGGAGCGCTCGCACGCTGACCGGTTCAGCGGGCGCGAGCGCGAGCTGGCGCAGTTGGC
CACACTGTTCGACCCGACGGGACCAATCATCGTGCTGCTGCACGGCGCCGGCGGTATCGGGAAGACAAGCCTGGTACACG
TATTTGAGCGAGAGTCGGCTGCACGGGAACGGAAGGTGCACCTGCTTGATTGCCGCAGTGTGGAGCCGGTTCCGGCCGGC
CTTTTGGGGATGATCGGAAGCTCGCTCGGCGTGGAGCTGAGAAATGTCTCCGAGGCGGCAGCAGCGATCGAGGCTTTAGC
CGAGCCGGTGGTTTTCGCCTTGGACAACTACGAGGCCCTGCGCCTTCTGGATGGTTGGCTGCGCACAGAGTTTCTTCCGG
CCCTGCCCACATCGGCGCGGTTCATCATCACGGGGCGTTCGCTCGCTACCGCGCCATGGATCGCTGCTCCCGGTTGGGCG
GACCATGTGCTCAGTTTACGGCTGGGTCCTCTTCCGGAGGCGGATGTCGCGGCCTTCCTGTCCCGCCGCGGGTTCACAGA
AGCGATCCAGGGCCGGATTGCCCGCTTCTCCAGAGGAAATCCCCTGGCTCTGCAGTTGTGTACGGCCAGTCTCGGCGACC
GGCCCGACGCTCTGAGCGGCGACCTGGAACTCAATCAAGTTATCGATTACCTGGCGCACACGTGCGTGAAGGAAATCGCC
GACCCGGTGATGAGGGAAGCGATCGAAGCCGCATCTCTGGTTCGCCGGGTTACCAGGCCCGTTCTCGAAGCGATGCTGCC
GGACCATTCCGCCGAGAACATTTTGGCGAGTCTGCGGCAACTTTCCTTCATCGAAGCGGCGGCCGACGGGCTTGTGCTGC
ACGATGCCTTTCGGCTGGCTATCGAAGCTCGCGTAGCGGCGATGGACCCTGTCCGAAGCCGGAGATTGAAACGAGCGGCG
TGGCGATCCATGCGAGATCAGTTGATGGCCGCGGGAGCACGAGATACGTGGCGGCACACGGCCGACTTGTTGTTCCTGTT
GGAGCGACCGGTCCTGCGCGAGGCGTTCTTTCCTTCCGGGACTACGCTGCCGGTGGAAAGGGCCAGACCCGGTGATCGCG
ACCCGATTTTGGAGATCGCACGAATCCACGACGGTGACAGCGGCGCTGCCATCATGTCCGAGTGGTGGAGACAAGCCGCG
CACACGTTCTCCGTGGTTCGGGGCAGCGCGGCAGACGTGGTTGGATTTTATGCGATGGCGCGGCCTCAGGATGTGCCGCG
ATCTCTGGCCGAGTGCGATCCGCTGCTCGCGGTGTGGCTGAGTTACGCGCAGGCTCGCGGGAGCGATCCGCAGCGGCCCT
ACCTTTTGATCCGATGCCTGCTGTCGCGTGTGCTGGGCGAGCGCCAAAGTCCGGAGTGGGCGGCTTGCGTTTTGGATGCC
AAGCGGGCGTACCTGGAGAATCCGCGAGCCGTGGGTGTACTTACGGCGATCCGTGAACCTGATTCGATTCCACAGGCTGT
TCTGGACCTTGGCTTCAAACTCGAGCCGAGCCTGACGGTCTCGATCGGCCCCTCGCCGATTCACACCGCCGTGCTTCGAT
TTGGGCCGCAGGGTCCGATGCATTGGATGTTAGAGTTCGTCAGCAGGGACCTATCGCGGGAGCCGGTTGATTCTTCGAAA
CCCGAGGTCGAGCTGGATGTTTCCCGCCGCCAGTTAGTAACCTGCAACAGCGGCCGGTTCCATCTTACAAAACTCGAGTT
CGAGTTGATGGCTTATCTGTCGCAGCGTCCCGGCCGAGTGGTGACACGCGACGAATTACTGCGCGAGGTCTGGAAGCAGC
CTTTCGGCGGAAGCAATGTTGTGGATGTGGTGGTTCGAAGCCTTCGCCGAAAATTGGGCGGCAGCGCCTGGGTGATCGGC
ACGGTGAAAGGGCATGGCTACCAGTACAACGAGACCGGATCGTGA

Upstream 100 bases:

>100_bases
TCTACACTGTCAGTTTGGGGCGAGTTGTTCCGGCGAGCATGAGACTGGGATGAGATCGGGATGAGAAATCCGAAGCACTA
GTTAACTCACAGCATTTGCG

Downstream 100 bases:

>100_bases
ACACCTTAAAGAGTCGGCTGCACCAGCACTTTGCCGGTGGCTCCGGATTCGAGCAGCCGGTAGGCGTCGATCGCGCAATC
CAGGGGAAAGCGGCCGGCGA

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 654; Mature: 653

Protein sequence:

>654_residues
MSTIKNSLERSHADRFSGRERELAQLATLFDPTGPIIVLLHGAGGIGKTSLVHVFERESAARERKVHLLDCRSVEPVPAG
LLGMIGSSLGVELRNVSEAAAAIEALAEPVVFALDNYEALRLLDGWLRTEFLPALPTSARFIITGRSLATAPWIAAPGWA
DHVLSLRLGPLPEADVAAFLSRRGFTEAIQGRIARFSRGNPLALQLCTASLGDRPDALSGDLELNQVIDYLAHTCVKEIA
DPVMREAIEAASLVRRVTRPVLEAMLPDHSAENILASLRQLSFIEAAADGLVLHDAFRLAIEARVAAMDPVRSRRLKRAA
WRSMRDQLMAAGARDTWRHTADLLFLLERPVLREAFFPSGTTLPVERARPGDRDPILEIARIHDGDSGAAIMSEWWRQAA
HTFSVVRGSAADVVGFYAMARPQDVPRSLAECDPLLAVWLSYAQARGSDPQRPYLLIRCLLSRVLGERQSPEWAACVLDA
KRAYLENPRAVGVLTAIREPDSIPQAVLDLGFKLEPSLTVSIGPSPIHTAVLRFGPQGPMHWMLEFVSRDLSREPVDSSK
PEVELDVSRRQLVTCNSGRFHLTKLEFELMAYLSQRPGRVVTRDELLREVWKQPFGGSNVVDVVVRSLRRKLGGSAWVIG
TVKGHGYQYNETGS

Sequences:

>Translated_654_residues
MSTIKNSLERSHADRFSGRERELAQLATLFDPTGPIIVLLHGAGGIGKTSLVHVFERESAARERKVHLLDCRSVEPVPAG
LLGMIGSSLGVELRNVSEAAAAIEALAEPVVFALDNYEALRLLDGWLRTEFLPALPTSARFIITGRSLATAPWIAAPGWA
DHVLSLRLGPLPEADVAAFLSRRGFTEAIQGRIARFSRGNPLALQLCTASLGDRPDALSGDLELNQVIDYLAHTCVKEIA
DPVMREAIEAASLVRRVTRPVLEAMLPDHSAENILASLRQLSFIEAAADGLVLHDAFRLAIEARVAAMDPVRSRRLKRAA
WRSMRDQLMAAGARDTWRHTADLLFLLERPVLREAFFPSGTTLPVERARPGDRDPILEIARIHDGDSGAAIMSEWWRQAA
HTFSVVRGSAADVVGFYAMARPQDVPRSLAECDPLLAVWLSYAQARGSDPQRPYLLIRCLLSRVLGERQSPEWAACVLDA
KRAYLENPRAVGVLTAIREPDSIPQAVLDLGFKLEPSLTVSIGPSPIHTAVLRFGPQGPMHWMLEFVSRDLSREPVDSSK
PEVELDVSRRQLVTCNSGRFHLTKLEFELMAYLSQRPGRVVTRDELLREVWKQPFGGSNVVDVVVRSLRRKLGGSAWVIG
TVKGHGYQYNETGS
>Mature_653_residues
STIKNSLERSHADRFSGRERELAQLATLFDPTGPIIVLLHGAGGIGKTSLVHVFERESAARERKVHLLDCRSVEPVPAGL
LGMIGSSLGVELRNVSEAAAAIEALAEPVVFALDNYEALRLLDGWLRTEFLPALPTSARFIITGRSLATAPWIAAPGWAD
HVLSLRLGPLPEADVAAFLSRRGFTEAIQGRIARFSRGNPLALQLCTASLGDRPDALSGDLELNQVIDYLAHTCVKEIAD
PVMREAIEAASLVRRVTRPVLEAMLPDHSAENILASLRQLSFIEAAADGLVLHDAFRLAIEARVAAMDPVRSRRLKRAAW
RSMRDQLMAAGARDTWRHTADLLFLLERPVLREAFFPSGTTLPVERARPGDRDPILEIARIHDGDSGAAIMSEWWRQAAH
TFSVVRGSAADVVGFYAMARPQDVPRSLAECDPLLAVWLSYAQARGSDPQRPYLLIRCLLSRVLGERQSPEWAACVLDAK
RAYLENPRAVGVLTAIREPDSIPQAVLDLGFKLEPSLTVSIGPSPIHTAVLRFGPQGPMHWMLEFVSRDLSREPVDSSKP
EVELDVSRRQLVTCNSGRFHLTKLEFELMAYLSQRPGRVVTRDELLREVWKQPFGGSNVVDVVVRSLRRKLGGSAWVIGT
VKGHGYQYNETGS

Specific function: Activates the transcription of the glnA gene [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 72025; Mature: 71893

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIKNSLERSHADRFSGRERELAQLATLFDPTGPIIVLLHGAGGIGKTSLVHVFERESA
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
ARERKVHLLDCRSVEPVPAGLLGMIGSSLGVELRNVSEAAAAIEALAEPVVFALDNYEAL
HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCHHHH
RLLDGWLRTEFLPALPTSARFIITGRSLATAPWIAAPGWADHVLSLRLGPLPEADVAAFL
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHH
SRRGFTEAIQGRIARFSRGNPLALQLCTASLGDRPDALSGDLELNQVIDYLAHTCVKEIA
HHCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
DPVMREAIEAASLVRRVTRPVLEAMLPDHSAENILASLRQLSFIEAAADGLVLHDAFRLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IEARVAAMDPVRSRRLKRAAWRSMRDQLMAAGARDTWRHTADLLFLLERPVLREAFFPSG
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCC
TTLPVERARPGDRDPILEIARIHDGDSGAAIMSEWWRQAAHTFSVVRGSAADVVGFYAMA
CCCCHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
RPQDVPRSLAECDPLLAVWLSYAQARGSDPQRPYLLIRCLLSRVLGERQSPEWAACVLDA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
KRAYLENPRAVGVLTAIREPDSIPQAVLDLGFKLEPSLTVSIGPSPIHTAVLRFGPQGPM
HHHHHCCCCCEEHHHHHCCCCCHHHHHHHCCCEECCCEEEEECCCHHHHHHHHCCCCCHH
HWMLEFVSRDLSREPVDSSKPEVELDVSRRQLVTCNSGRFHLTKLEFELMAYLSQRPGRV
HHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCE
VTRDELLREVWKQPFGGSNVVDVVVRSLRRKLGGSAWVIGTVKGHGYQYNETGS
ECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEECCCCCC
>Mature Secondary Structure 
STIKNSLERSHADRFSGRERELAQLATLFDPTGPIIVLLHGAGGIGKTSLVHVFERESA
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
ARERKVHLLDCRSVEPVPAGLLGMIGSSLGVELRNVSEAAAAIEALAEPVVFALDNYEAL
HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCHHHH
RLLDGWLRTEFLPALPTSARFIITGRSLATAPWIAAPGWADHVLSLRLGPLPEADVAAFL
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHH
SRRGFTEAIQGRIARFSRGNPLALQLCTASLGDRPDALSGDLELNQVIDYLAHTCVKEIA
HHCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
DPVMREAIEAASLVRRVTRPVLEAMLPDHSAENILASLRQLSFIEAAADGLVLHDAFRLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IEARVAAMDPVRSRRLKRAAWRSMRDQLMAAGARDTWRHTADLLFLLERPVLREAFFPSG
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCC
TTLPVERARPGDRDPILEIARIHDGDSGAAIMSEWWRQAAHTFSVVRGSAADVVGFYAMA
CCCCHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
RPQDVPRSLAECDPLLAVWLSYAQARGSDPQRPYLLIRCLLSRVLGERQSPEWAACVLDA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
KRAYLENPRAVGVLTAIREPDSIPQAVLDLGFKLEPSLTVSIGPSPIHTAVLRFGPQGPM
HHHHHCCCCCEEHHHHHCCCCCHHHHHHHCCCEECCCEEEEECCCHHHHHHHHCCCCCHH
HWMLEFVSRDLSREPVDSSKPEVELDVSRRQLVTCNSGRFHLTKLEFELMAYLSQRPGRV
HHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCE
VTRDELLREVWKQPFGGSNVVDVVVRSLRRKLGGSAWVIGTVKGHGYQYNETGS
ECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7688332; 12000953 [H]