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The map label for this gene is 116622311

Identifier: 116622311

GI number: 116622311

Start: 4057312

End: 4058670

Strand: Reverse

Name: 116622311

Synonym: Acid_3205

Alternate gene names: NA

Gene position: 4058670-4057312 (Counterclockwise)

Preceding gene: 116622312

Following gene: 116622310

Centisome position: 40.73

GC content: 64.31

Gene sequence:

>1359_bases
ATGGATTTCACAGCTCTTCGTTCGGATTTCAGCGGGGAGATTCTCACTCCTCAATCTGCCGGCTACGAGGCTGCCCGCAA
GATCTGGAACGGAATGATCGACCGGCGCCCGGCTGCGATCGCGCGCTGCACCGGACCCGAAGATGTAGCGGCCGCGGTCC
GGTTCGCGGCTGATCGGGATATCTATCCGGCAATACGCGGCGGCGGGCATAACGTCGCGGGGCTCGCCATGGTCGAGGAT
GGGCTCGTAATCGATCTCTCCCCGATGAAGTCCATCGCGGTGGACGCCGCGAAGCTCACCGCGACCGCGCAGACCGGTCT
CACGTGGGGTGAATTCGACCCGGCGACGCAAGCCCACGGCCTCGCGACTACGGGAGGGCTGGTCTCTACCACAGGGATCG
CGGGCCTTACACTGGGCGGCGGCATCGGGTGGCTGATGGGGCGATGCGGGCTGGTTTGTGACAACACGCTGGCCTACGAA
ATCGTGATCGCGAGCGGCGAACGGATCCGGGCATCGGCCGACGAGCATCCCGACCTGTTCTGGGCATTGAAAGGCGGCGG
CGGTAATTTCGGTGTAGTCACGTCGATCACGTACCGGCTGCACCCGCTCATCTCGATGATCGCGGGGTTGATTCTGCATC
CACTCGATCGCGCGCGTGAGGTGCTGAGCTTCTATCGCGACTTCGTGCAATCCGGATTGCCGGATGAACTGATCGTCTAT
GCAGCGGCAATGTCCACTCCGGATGGCATGCCGGTGATCGCGATGCTGCCCGCATGGTCGGGAAGCGACCTCGCGGCAGG
CGAGCGGGCAATCGCGCCGCTGCGGAACTTCGGGGCGCCGATCGCCGACCTGGTCACGGTGATGCCCTACGTGGCCCTCC
AGCAAATGATCGACGGCGGCGTGCCGCACGGATTGCGCAGCTACTGGAAGAGCGGCTTCGTGCGCGAGCTGCCCGATGCG
GCGATCGACACGTTCGTGGACTTTGCGCAGCAACGCACATCGCGCCACTCAATTGCGATCCTGGAACATATGCACGGCGC
CGCGACCCGCGTAGCCCCGGAGGCCACGGCATTCTCGATGAGGTCGGAGGGCCTTGACCTGGTGCTGATCGGGCTTTGGA
GCGATCCCGCGGAGGATGCGCGCCACACCGCGTGGACGCGCAGCTTTTTCGCGGCGATGAATCCATGGTCGATGGGCGCG
GTCTACGTGAATGCGCTTGATGACGACGAGGCATCGCGCGTGCCCCAGGCGTACGGACGGAACTACACGCGGCTCTCGGG
AATCAAGGGCAGATACGACTCGGAGAACCGCTTCCGGCGTAACCACAATATCGCCCCCGTCAAGCAGGCGATGGCATAG

Upstream 100 bases:

>100_bases
CCCTGAACACGCTCCGGGATGCCGTGAAGGACTGCATCGGTTAGCGCGCGATTGCCGTTGCACGCTGTGATATGCTAATC
GGCCTGATCGGGAGGGGAAG

Downstream 100 bases:

>100_bases
CCTCATTGCGGGTCCTTTCCCGTTTGAACTCGCGACACCCCGGCGCAGTCCACGATTGGCGCCGAGTGTGCTACATTTGG
CGATATTCACCAGGTAGTGT

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: 6-HDNO [H]

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MDFTALRSDFSGEILTPQSAGYEAARKIWNGMIDRRPAAIARCTGPEDVAAAVRFAADRDIYPAIRGGGHNVAGLAMVED
GLVIDLSPMKSIAVDAAKLTATAQTGLTWGEFDPATQAHGLATTGGLVSTTGIAGLTLGGGIGWLMGRCGLVCDNTLAYE
IVIASGERIRASADEHPDLFWALKGGGGNFGVVTSITYRLHPLISMIAGLILHPLDRAREVLSFYRDFVQSGLPDELIVY
AAAMSTPDGMPVIAMLPAWSGSDLAAGERAIAPLRNFGAPIADLVTVMPYVALQQMIDGGVPHGLRSYWKSGFVRELPDA
AIDTFVDFAQQRTSRHSIAILEHMHGAATRVAPEATAFSMRSEGLDLVLIGLWSDPAEDARHTAWTRSFFAAMNPWSMGA
VYVNALDDDEASRVPQAYGRNYTRLSGIKGRYDSENRFRRNHNIAPVKQAMA

Sequences:

>Translated_452_residues
MDFTALRSDFSGEILTPQSAGYEAARKIWNGMIDRRPAAIARCTGPEDVAAAVRFAADRDIYPAIRGGGHNVAGLAMVED
GLVIDLSPMKSIAVDAAKLTATAQTGLTWGEFDPATQAHGLATTGGLVSTTGIAGLTLGGGIGWLMGRCGLVCDNTLAYE
IVIASGERIRASADEHPDLFWALKGGGGNFGVVTSITYRLHPLISMIAGLILHPLDRAREVLSFYRDFVQSGLPDELIVY
AAAMSTPDGMPVIAMLPAWSGSDLAAGERAIAPLRNFGAPIADLVTVMPYVALQQMIDGGVPHGLRSYWKSGFVRELPDA
AIDTFVDFAQQRTSRHSIAILEHMHGAATRVAPEATAFSMRSEGLDLVLIGLWSDPAEDARHTAWTRSFFAAMNPWSMGA
VYVNALDDDEASRVPQAYGRNYTRLSGIKGRYDSENRFRRNHNIAPVKQAMA
>Mature_452_residues
MDFTALRSDFSGEILTPQSAGYEAARKIWNGMIDRRPAAIARCTGPEDVAAAVRFAADRDIYPAIRGGGHNVAGLAMVED
GLVIDLSPMKSIAVDAAKLTATAQTGLTWGEFDPATQAHGLATTGGLVSTTGIAGLTLGGGIGWLMGRCGLVCDNTLAYE
IVIASGERIRASADEHPDLFWALKGGGGNFGVVTSITYRLHPLISMIAGLILHPLDRAREVLSFYRDFVQSGLPDELIVY
AAAMSTPDGMPVIAMLPAWSGSDLAAGERAIAPLRNFGAPIADLVTVMPYVALQQMIDGGVPHGLRSYWKSGFVRELPDA
AIDTFVDFAQQRTSRHSIAILEHMHGAATRVAPEATAFSMRSEGLDLVLIGLWSDPAEDARHTAWTRSFFAAMNPWSMGA
VYVNALDDDEASRVPQAYGRNYTRLSGIKGRYDSENRFRRNHNIAPVKQAMA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: =1.5.3.6 [H]

Molecular weight: Translated: 48507; Mature: 48507

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTALRSDFSGEILTPQSAGYEAARKIWNGMIDRRPAAIARCTGPEDVAAAVRFAADRD
CCCHHHHCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHEECCCHHHHHHHHHHHCCCC
IYPAIRGGGHNVAGLAMVEDGLVIDLSPMKSIAVDAAKLTATAQTGLTWGEFDPATQAHG
CCHHHCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHEEHHHCCCCCCCCCCCCCCCC
LATTGGLVSTTGIAGLTLGGGIGWLMGRCGLVCDNTLAYEIVIASGERIRASADEHPDLF
CCCCCCCCCCCCCCCEEECCHHHHHHHCCCCEECCCEEEEEEEECCCEEECCCCCCCCEE
WALKGGGGNFGVVTSITYRLHPLISMIAGLILHPLDRAREVLSFYRDFVQSGLPDELIVY
EEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHE
AAAMSTPDGMPVIAMLPAWSGSDLAAGERAIAPLRNFGAPIADLVTVMPYVALQQMIDGG
EHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
VPHGLRSYWKSGFVRELPDAAIDTFVDFAQQRTSRHSIAILEHMHGAATRVAPEATAFSM
CCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCHHHHHH
RSEGLDLVLIGLWSDPAEDARHTAWTRSFFAAMNPWSMGAVYVNALDDDEASRVPQAYGR
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCHHHCC
NYTRLSGIKGRYDSENRFRRNHNIAPVKQAMA
CCEEECCCCCCCCCHHHHHHCCCCCHHHHHCC
>Mature Secondary Structure
MDFTALRSDFSGEILTPQSAGYEAARKIWNGMIDRRPAAIARCTGPEDVAAAVRFAADRD
CCCHHHHCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHEECCCHHHHHHHHHHHCCCC
IYPAIRGGGHNVAGLAMVEDGLVIDLSPMKSIAVDAAKLTATAQTGLTWGEFDPATQAHG
CCHHHCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHEEHHHCCCCCCCCCCCCCCCC
LATTGGLVSTTGIAGLTLGGGIGWLMGRCGLVCDNTLAYEIVIASGERIRASADEHPDLF
CCCCCCCCCCCCCCCEEECCHHHHHHHCCCCEECCCEEEEEEEECCCEEECCCCCCCCEE
WALKGGGGNFGVVTSITYRLHPLISMIAGLILHPLDRAREVLSFYRDFVQSGLPDELIVY
EEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHE
AAAMSTPDGMPVIAMLPAWSGSDLAAGERAIAPLRNFGAPIADLVTVMPYVALQQMIDGG
EHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
VPHGLRSYWKSGFVRELPDAAIDTFVDFAQQRTSRHSIAILEHMHGAATRVAPEATAFSM
CCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCHHHHHH
RSEGLDLVLIGLWSDPAEDARHTAWTRSFFAAMNPWSMGAVYVNALDDDEASRVPQAYGR
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCHHHCC
NYTRLSGIKGRYDSENRFRRNHNIAPVKQAMA
CCEEECCCCCCCCCHHHHHHCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3622516; 2680607; 2115879 [H]