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The map label for this gene is ykaA [H]

Identifier: 116622293

GI number: 116622293

Start: 4036235

End: 4036849

Strand: Reverse

Name: ykaA [H]

Synonym: Acid_3187

Alternate gene names: 116622293

Gene position: 4036849-4036235 (Counterclockwise)

Preceding gene: 116622294

Following gene: 116622292

Centisome position: 40.51

GC content: 55.12

Gene sequence:

>615_bases
ATGAGATTGCTTCCACGCGAGGAGAAGTTTTACCACCTGTTTCTGAAACAGGTGGAGATCATCTCGGAGGCCACGCGTTT
GCTGCTGGAAGGCCTTCGGGGCGGCAATGCAAGACTGGCCGGCGTCGCCACCGAAATCAATGTGTTGGAACATCGCGGGG
ACGAAGTCATCCACGAACTGTTCACCCGCCTCAACCAGACGTTTATTACCCCCATCGATCCCGAAGACATTCATAATCTC
TCCTCCGCGCTGGATAACGTGCTGGATGGAATCGAGGACACGTCGCACCGCCTGGTTTCTTACCGGATTTATCCCATACC
GGAGACGATGATCAAATTGTCGATGATGTTGGTCAGCTGTTCCACGGCGCTCAAAGCGGCCTTTCAGGCGCTCGAGCAGA
ACGGCCCCATCATGGAGCACTGCATCGAGATCAACCGGCTCGAGAACGAAGCCGACCTGATCGGCAGGAGCGCGGTAGCA
GAGCTGTTCGACAAGGAAACCGACCCCATTACCCTGATCAAGCTGAAGGAAGTCTACGAATTCTTCGAGGCGACCATCGA
TAGCTGCGAAGACGTGGCCGACGTTCTGCAAAACGTAGTGGTCAAGAACAGCTAG

Upstream 100 bases:

>100_bases
AGGAATTGTTCCCGATTGTCACCGAAATGTAATTCTGGGTCGATTGACCCTGGGCCTGCATACCGATTACCATGAGTCTC
TCGAAATCCAAGCCCAACTT

Downstream 100 bases:

>100_bases
CATGTCCGTTCTTACACTCGCCGCCTTGATCATCGTGATCGCGTTGGTGTTCGATTACATCAATGGCTTTCACGATGCGG
CAAATTCCATCGCCACGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRLLPREEKFYHLFLKQVEIISEATRLLLEGLRGGNARLAGVATEINVLEHRGDEVIHELFTRLNQTFITPIDPEDIHNL
SSALDNVLDGIEDTSHRLVSYRIYPIPETMIKLSMMLVSCSTALKAAFQALEQNGPIMEHCIEINRLENEADLIGRSAVA
ELFDKETDPITLIKLKEVYEFFEATIDSCEDVADVLQNVVVKNS

Sequences:

>Translated_204_residues
MRLLPREEKFYHLFLKQVEIISEATRLLLEGLRGGNARLAGVATEINVLEHRGDEVIHELFTRLNQTFITPIDPEDIHNL
SSALDNVLDGIEDTSHRLVSYRIYPIPETMIKLSMMLVSCSTALKAAFQALEQNGPIMEHCIEINRLENEADLIGRSAVA
ELFDKETDPITLIKLKEVYEFFEATIDSCEDVADVLQNVVVKNS
>Mature_204_residues
MRLLPREEKFYHLFLKQVEIISEATRLLLEGLRGGNARLAGVATEINVLEHRGDEVIHELFTRLNQTFITPIDPEDIHNL
SSALDNVLDGIEDTSHRLVSYRIYPIPETMIKLSMMLVSCSTALKAAFQALEQNGPIMEHCIEINRLENEADLIGRSAVA
ELFDKETDPITLIKLKEVYEFFEATIDSCEDVADVLQNVVVKNS

Specific function: Unknown

COG id: COG1392

COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0111 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR018445 [H]

Pfam domain/function: PF01865 PhoU_div [H]

EC number: NA

Molecular weight: Translated: 23081; Mature: 23081

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLPREEKFYHLFLKQVEIISEATRLLLEGLRGGNARLAGVATEINVLEHRGDEVIHEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCHHHHHHH
FTRLNQTFITPIDPEDIHNLSSALDNVLDGIEDTSHRLVSYRIYPIPETMIKLSMMLVSC
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHH
STALKAAFQALEQNGPIMEHCIEINRLENEADLIGRSAVAELFDKETDPITLIKLKEVYE
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
FFEATIDSCEDVADVLQNVVVKNS
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLLPREEKFYHLFLKQVEIISEATRLLLEGLRGGNARLAGVATEINVLEHRGDEVIHEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCHHHHHHH
FTRLNQTFITPIDPEDIHNLSSALDNVLDGIEDTSHRLVSYRIYPIPETMIKLSMMLVSC
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHH
STALKAAFQALEQNGPIMEHCIEINRLENEADLIGRSAVAELFDKETDPITLIKLKEVYE
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
FFEATIDSCEDVADVLQNVVVKNS
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]